RNA–Protein interactions for RNA: ENSMUST00000221370.1

Trim9-208, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 2,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-208ENSMUST00000221370 Gm11555B1AQ89 175 aa6.3□□□□□ -1.4
Trim9-208ENSMUST00000221370 Sprr2fO70557 76 aa6.29□□□□□ -1.4
Trim9-208ENSMUST00000221370 2300003K06RikA2A4M0 262 aa6.28□□□□□ -1.4
Trim9-208ENSMUST00000221370 ObscnA2AAJ9 8891 aaKnown RBP6.25□□□□□ -1.41
Trim9-208ENSMUST00000221370 Krtap4-1Q3UUY3 169 aa6.23□□□□□ -1.41
Trim9-208ENSMUST00000221370 Lce3aQ497I5 98 aa6.23□□□□□ -1.41
Trim9-208ENSMUST00000221370 Lce1bQ9D149 137 aa6.1□□□□□ -1.43
Trim9-208ENSMUST00000221370 Krtap31-1Q9D644 177 aa6.09□□□□□ -1.43
Trim9-208ENSMUST00000221370 Krtap4-2B1AQ85 167 aa6.08□□□□□ -1.44
Trim9-208ENSMUST00000221370 Lce1gQ9D195 139 aa6.06□□□□□ -1.44
Trim9-208ENSMUST00000221370 Gm38119A0A0A6YX29 146 aa6.06□□□□□ -1.44
Trim9-208ENSMUST00000221370 Mt4P47945 62 aa6.03□□□□□ -1.44
Trim9-208ENSMUST00000221370 Gm11564A2A4L9 201 aa5.99□□□□□ -1.45
Trim9-208ENSMUST00000221370 Gm11563B1AQ90 168 aa5.99□□□□□ -1.45
Trim9-208ENSMUST00000221370 Gm11595B1AQA7 289 aa5.99□□□□□ -1.45
Trim9-208ENSMUST00000221370 Krtap4-8B1AQA8 209 aa5.99□□□□□ -1.45
Trim9-208ENSMUST00000221370 Mt1P02802 61 aaKnown RBP5.98□□□□□ -1.45
Trim9-208ENSMUST00000221370 Syne2Q6ZWQ0 6874 aaKnown RBP5.98□□□□□ -1.45
Trim9-208ENSMUST00000221370 Gm11596B1AQB0 205 aa5.95□□□□□ -1.46
Trim9-208ENSMUST00000221370 Krtap4-9B1AQA9 244 aa5.88□□□□□ -1.47
Trim9-208ENSMUST00000221370 Lce1lQ9D1G7 135 aa5.86□□□□□ -1.47
Trim9-208ENSMUST00000221370 Fsip2A2ARZ3 6995 aa5.83□□□□□ -1.48
Trim9-208ENSMUST00000221370 Lce1kJ3QP15 125 aa5.79□□□□□ -1.48
Trim9-208ENSMUST00000221370 Krtap4-16Q91W93 202 aa5.71□□□□□ -1.5
Trim9-208ENSMUST00000221370 Krtap4-13Q9D7P3 165 aa5.66□□□□□ -1.5
Trim9-208ENSMUST00000221370 Gm11568A2A4M2 211 aa5.59□□□□□ -1.51
Trim9-208ENSMUST00000221370 Krtap9-1Q64526 186 aa5.59□□□□□ -1.51
Trim9-208ENSMUST00000221370 A0A1Y7VJH8 109 aa5.57□□□□□ -1.52
Trim9-208ENSMUST00000221370 Krtap4-7Q9D732 168 aa5.52□□□□□ -1.53
Trim9-208ENSMUST00000221370 Gm10024A0A0A0MQA4 119 aa5.44□□□□□ -1.54
Trim9-208ENSMUST00000221370 Krtap5-2Q9D5Z7 189 aa5.43□□□□□ -1.54
Trim9-208ENSMUST00000221370 Krtap20-2E9Q0A8 60 aa5.37□□□□□ -1.55
Trim9-208ENSMUST00000221370 Gm10153A0A1B0GRL1 320 aa5.34□□□□□ -1.55
Trim9-208ENSMUST00000221370 A0A1Y7VLE6 161 aa5.28□□□□□ -1.56
Trim9-208ENSMUST00000221370 Mt3P28184 68 aa5.25□□□□□ -1.57
Trim9-208ENSMUST00000221370 Krtap6-3A0A087WQL6 57 aa5.05□□□□□ -1.6
Trim9-208ENSMUST00000221370 Gm45337A0A1B0GS71 263 aa4.96□□□□□ -1.62
Trim9-208ENSMUST00000221370 Gm4553A0A1B0GSA9 284 aa4.91□□□□□ -1.62
Trim9-208ENSMUST00000221370 Macf1Q9QXZ0 7354 aaKnown RBP4.9□□□□□ -1.62
Trim9-208ENSMUST00000221370 Muc16A0A140LJ72 8478 aa4.89□□□□□ -1.63
Trim9-208ENSMUST00000221370 Hmcn1D3YXG0 5634 aa4.85□□□□□ -1.63
Trim9-208ENSMUST00000221370 Krtap31-2Q8CAY5 177 aa4.85□□□□□ -1.63
Trim9-208ENSMUST00000221370 Gm40460A0A1B0GR10 244 aa4.84□□□□□ -1.63
Trim9-208ENSMUST00000221370 Gm7579A0A1B0GRJ4 243 aa4.84□□□□□ -1.63
Trim9-208ENSMUST00000221370 Krtap5-5Q2TA51 241 aa4.84□□□□□ -1.63
Trim9-208ENSMUST00000221370 Krtap5-4Q62220 223 aa4.84□□□□□ -1.63
Trim9-208ENSMUST00000221370 Gm11559Q9D3H7 191 aa4.77□□□□□ -1.65
Trim9-208ENSMUST00000221370 Gm2431E9Q8S1 172 aa4.73□□□□□ -1.65
Trim9-208ENSMUST00000221370 Kmt2dQ6PDK2 5588 aa4.67□□□□□ -1.66
Trim9-208ENSMUST00000221370 1110025L11RikO09048 78 aa4.65□□□□□ -1.67
Trim9-208ENSMUST00000221370 Krtap6-5Q925H3 78 aa4.65□□□□□ -1.67
Trim9-208ENSMUST00000221370 Gm11554B1AQB2 190 aa4.54□□□□□ -1.68
Trim9-208ENSMUST00000221370 Krtap28-10A0A1Y7VP58 119 aa4.53□□□□□ -1.68
Trim9-208ENSMUST00000221370 Sprr2bO70554 98 aa4.43□□□□□ -1.7
Trim9-208ENSMUST00000221370 Gm39115A0A1B0GSH7 232 aa4.34□□□□□ -1.71
Trim9-208ENSMUST00000221370 Gm7544A0A1Y7VJ58 118 aa4.33□□□□□ -1.72
Trim9-208ENSMUST00000221370 A030005L19RikA0A1Y7VIU2 113 aa4.32□□□□□ -1.72
Trim9-208ENSMUST00000221370 Muc19Q6PZE0 7524 aa4.29□□□□□ -1.72
Trim9-208ENSMUST00000221370 A030005K14RikA0A1Y7VNY1 122 aa4.18□□□□□ -1.74
Trim9-208ENSMUST00000221370 Krtap28-13A0A087WQP5 138 aa4.16□□□□□ -1.74
Trim9-208ENSMUST00000221370 A0A1Y7VJ07 166 aa4.13□□□□□ -1.75
Trim9-208ENSMUST00000221370 DstQ91ZU6 7393 aaKnown RBP4.1□□□□□ -1.75
Trim9-208ENSMUST00000221370 Gm10229O08631 77 aa4.09□□□□□ -1.75
Trim9-208ENSMUST00000221370 Eppk1Q8R0W0 6548 aa4.05□□□□□ -1.76
Trim9-208ENSMUST00000221370 AhnakE9Q616 5656 aaKnown RBP3.99□□□□□ -1.77
Trim9-208ENSMUST00000221370 Gm11639A0A1D5RLM8 5808 aa3.97□□□□□ -1.77
Trim9-208ENSMUST00000221370 Krtap21-1Q925H4 128 aa3.84□□□□□ -1.79
Trim9-208ENSMUST00000221370 Phgr1Q8K0G7 91 aa3.84□□□□□ -1.79
Trim9-208ENSMUST00000221370 A0A286YCP9 139 aa3.79□□□□□ -1.8
Trim9-208ENSMUST00000221370 Gm11567Q9D141 195 aa3.78□□□□□ -1.8
Trim9-208ENSMUST00000221370 A030003K21RikA0A1Y7VIM3 128 aa3.74□□□□□ -1.81
Trim9-208ENSMUST00000221370 Gm6217A0A1Y7VJK9 128 aa3.74□□□□□ -1.81
Trim9-208ENSMUST00000221370 NebE9Q1W3 7152 aa3.74□□□□□ -1.81
Trim9-208ENSMUST00000221370 Gm29735A0A1B0GT06 219 aa3.7□□□□□ -1.82
Trim9-208ENSMUST00000221370 Gm45618A0A1B0GSA0 219 aa3.6□□□□□ -1.83
Trim9-208ENSMUST00000221370 A030014E15RikA0A1Y7VJV2 120 aa3.51□□□□□ -1.85
Trim9-208ENSMUST00000221370 Gpr98Q8VHN7 6298 aaKnown RBP3.51□□□□□ -1.85
Trim9-208ENSMUST00000221370 Krtap6-2O08884 159 aa3.41□□□□□ -1.86
Trim9-208ENSMUST00000221370 Krtap5-1Q64507 230 aa2.12□□□□□ -2.07
Trim9-208ENSMUST00000221370 Gm4559A4IF42 199 aa2.11□□□□□ -2.07
Retrieved 80 of 22,080 RNA–protein pairs in 139.9 ms