RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Lce1cQ9D1C5 147 aa4.51□□□□□ -1.69
Clcn4-203ENSMUST00000210061 Gm10100J3QK64 120 aa4.4□□□□□ -1.71
Clcn4-203ENSMUST00000210061 Krtap19-4Q925H7 84 aa4.4□□□□□ -1.71
Clcn4-203ENSMUST00000210061 Mdn1A2ANY6 5589 aaKnown RBP4.38□□□□□ -1.71
Clcn4-203ENSMUST00000210061 Gm11569B1AQB1 180 aa4.37□□□□□ -1.71
Clcn4-203ENSMUST00000210061 Lce3bQ9CQM7 98 aa4.36□□□□□ -1.71
Clcn4-203ENSMUST00000210061 Lce1fB9EJP6 147 aa4.35□□□□□ -1.71
Clcn4-203ENSMUST00000210061 Lce1a1Q9CQH5 143 aa4.35□□□□□ -1.71
Clcn4-203ENSMUST00000210061 Gm11559Q9D3H7 191 aa4.32□□□□□ -1.72
Clcn4-203ENSMUST00000210061 Gm10142J3KMP7 120 aa4.31□□□□□ -1.72
Clcn4-203ENSMUST00000210061 A0A1Y7VJ07 166 aa4.26□□□□□ -1.73
Clcn4-203ENSMUST00000210061 Sprr2iO70560 76 aa4.25□□□□□ -1.73
Clcn4-203ENSMUST00000210061 Syne1Q6ZWR6 8799 aa4.19□□□□□ -1.74
Clcn4-203ENSMUST00000210061 Lce3cQ91V05 98 aa4.19□□□□□ -1.74
Clcn4-203ENSMUST00000210061 Sprr2hO70559 108 aa4.16□□□□□ -1.74
Clcn4-203ENSMUST00000210061 Lce3dE9Q8V1 98 aa4.16□□□□□ -1.74
Clcn4-203ENSMUST00000210061 Sprr2eO70556 76 aa4.1□□□□□ -1.75
Clcn4-203ENSMUST00000210061 Lce3eF8VQJ0 98 aa4.06□□□□□ -1.76
Clcn4-203ENSMUST00000210061 Lce3fQ6PAI4 98 aa4.06□□□□□ -1.76
Clcn4-203ENSMUST00000210061 Sprr2fO70557 76 aa4.04□□□□□ -1.76
Clcn4-203ENSMUST00000210061 2300003K06RikA2A4M0 262 aa4.02□□□□□ -1.77
Clcn4-203ENSMUST00000210061 Sprr2kO70562 68 aa4.02□□□□□ -1.77
Clcn4-203ENSMUST00000210061 Lce3aQ497I5 98 aa4□□□□□ -1.77
Clcn4-203ENSMUST00000210061 Lce1gQ9D195 139 aa3.97□□□□□ -1.77
Clcn4-203ENSMUST00000210061 Krtap4-6Q3V4B7 195 aa3.96□□□□□ -1.77
Clcn4-203ENSMUST00000210061 ObscnA2AAJ9 8891 aaKnown RBP3.94□□□□□ -1.78
Clcn4-203ENSMUST00000210061 A030014E15RikA0A1Y7VJV2 120 aa3.93□□□□□ -1.78
Clcn4-203ENSMUST00000210061 Gm11596B1AQB0 205 aa3.8□□□□□ -1.8
Clcn4-203ENSMUST00000210061 Mt4P47945 62 aa3.77□□□□□ -1.81
Clcn4-203ENSMUST00000210061 Krtap4-16Q91W93 202 aa3.75□□□□□ -1.81
Clcn4-203ENSMUST00000210061 Syne2Q6ZWQ0 6874 aaKnown RBP3.75□□□□□ -1.81
Clcn4-203ENSMUST00000210061 Mt1P02802 61 aaKnown RBP3.74□□□□□ -1.81
Clcn4-203ENSMUST00000210061 Fsip2A2ARZ3 6995 aa3.73□□□□□ -1.81
Clcn4-203ENSMUST00000210061 Gm11564A2A4L9 201 aa3.71□□□□□ -1.82
Clcn4-203ENSMUST00000210061 Gm11595B1AQA7 289 aa3.71□□□□□ -1.82
Clcn4-203ENSMUST00000210061 Krtap4-8B1AQA8 209 aa3.71□□□□□ -1.82
Clcn4-203ENSMUST00000210061 Lce1lQ9D1G7 135 aa3.69□□□□□ -1.82
Clcn4-203ENSMUST00000210061 Krtap4-9B1AQA9 244 aa3.65□□□□□ -1.82
Clcn4-203ENSMUST00000210061 Krtap9-1Q64526 186 aa3.65□□□□□ -1.83
Clcn4-203ENSMUST00000210061 Lce1kJ3QP15 125 aa3.64□□□□□ -1.83
Clcn4-203ENSMUST00000210061 Gm11568A2A4M2 211 aa3.55□□□□□ -1.84
Clcn4-203ENSMUST00000210061 Krtap4-13Q9D7P3 165 aa3.53□□□□□ -1.84
Clcn4-203ENSMUST00000210061 Gm10024A0A0A0MQA4 119 aa3.48□□□□□ -1.85
Clcn4-203ENSMUST00000210061 Krtap6-3A0A087WQL6 57 aa3.43□□□□□ -1.86
Clcn4-203ENSMUST00000210061 Krtap20-2E9Q0A8 60 aa3.34□□□□□ -1.87
Clcn4-203ENSMUST00000210061 Krtap5-2Q9D5Z7 189 aa3.32□□□□□ -1.88
Clcn4-203ENSMUST00000210061 Gm10153A0A1B0GRL1 320 aa3.3□□□□□ -1.88
Clcn4-203ENSMUST00000210061 Mt3P28184 68 aa3.27□□□□□ -1.89
Clcn4-203ENSMUST00000210061 Muc16A0A140LJ72 8478 aa3.27□□□□□ -1.89
Clcn4-203ENSMUST00000210061 Macf1Q9QXZ0 7354 aaKnown RBP3.17□□□□□ -1.9
Clcn4-203ENSMUST00000210061 Hmcn1D3YXG0 5634 aa3.08□□□□□ -1.92
Clcn4-203ENSMUST00000210061 Kmt2dQ6PDK2 5588 aa3.03□□□□□ -1.92
Clcn4-203ENSMUST00000210061 Gm45337A0A1B0GS71 263 aa3.02□□□□□ -1.93
Clcn4-203ENSMUST00000210061 Gm45618A0A1B0GSA0 219 aa2.99□□□□□ -1.93
Clcn4-203ENSMUST00000210061 Gm4553A0A1B0GSA9 284 aa2.98□□□□□ -1.93
Clcn4-203ENSMUST00000210061 Gm40460A0A1B0GR10 244 aa2.94□□□□□ -1.94
Clcn4-203ENSMUST00000210061 Gm7579A0A1B0GRJ4 243 aa2.94□□□□□ -1.94
Clcn4-203ENSMUST00000210061 Krtap5-5Q2TA51 241 aa2.94□□□□□ -1.94
Clcn4-203ENSMUST00000210061 Krtap5-4Q62220 223 aa2.94□□□□□ -1.94
Clcn4-203ENSMUST00000210061 1110025L11RikO09048 78 aa2.92□□□□□ -1.94
Clcn4-203ENSMUST00000210061 Krtap6-5Q925H3 78 aa2.92□□□□□ -1.94
Clcn4-203ENSMUST00000210061 Gm2431E9Q8S1 172 aa2.9□□□□□ -1.94
Clcn4-203ENSMUST00000210061 Eppk1Q8R0W0 6548 aa2.85□□□□□ -1.95
Clcn4-203ENSMUST00000210061 Gm11554B1AQB2 190 aa2.84□□□□□ -1.95
Clcn4-203ENSMUST00000210061 Muc19Q6PZE0 7524 aa2.81□□□□□ -1.96
Clcn4-203ENSMUST00000210061 Sprr2bO70554 98 aa2.76□□□□□ -1.97
Clcn4-203ENSMUST00000210061 Gm11567Q9D141 195 aa2.7□□□□□ -1.98
Clcn4-203ENSMUST00000210061 Gm39115A0A1B0GSH7 232 aa2.65□□□□□ -1.99
Clcn4-203ENSMUST00000210061 DstQ91ZU6 7393 aaKnown RBP2.59□□□□□ -2
Clcn4-203ENSMUST00000210061 Gm10229O08631 77 aa2.57□□□□□ -2
Clcn4-203ENSMUST00000210061 Gm11639A0A1D5RLM8 5808 aa2.54□□□□□ -2
Clcn4-203ENSMUST00000210061 AhnakE9Q616 5656 aaKnown RBP2.5□□□□□ -2.01
Clcn4-203ENSMUST00000210061 Phgr1Q8K0G7 91 aa2.45□□□□□ -2.02
Clcn4-203ENSMUST00000210061 Gm29735A0A1B0GT06 219 aa2.41□□□□□ -2.02
Clcn4-203ENSMUST00000210061 Gpr98Q8VHN7 6298 aaKnown RBP2.41□□□□□ -2.02
Clcn4-203ENSMUST00000210061 Krtap21-1Q925H4 128 aa2.41□□□□□ -2.02
Clcn4-203ENSMUST00000210061 NebE9Q1W3 7152 aa2.31□□□□□ -2.04
Clcn4-203ENSMUST00000210061 Krtap5-1Q64507 230 aa2.19□□□□□ -2.06
Clcn4-203ENSMUST00000210061 Krtap6-2O08884 159 aa2.13□□□□□ -2.07
Clcn4-203ENSMUST00000210061 Gm4559A4IF42 199 aa2.08□□□□□ -2.08
Retrieved 80 of 22,080 RNA–protein pairs in 142.8 ms