RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Gm11564A2A4L9 201 aa3.25□□□□□ -1.89
Sh3rf1-202ENSMUST00000209611 Gm11563B1AQ90 168 aa3.25□□□□□ -1.89
Sh3rf1-202ENSMUST00000209611 Gm11595B1AQA7 289 aa3.25□□□□□ -1.89
Sh3rf1-202ENSMUST00000209611 Krtap4-8B1AQA8 209 aa3.25□□□□□ -1.89
Sh3rf1-202ENSMUST00000209611 Gm11555B1AQ89 175 aa3.24□□□□□ -1.89
Sh3rf1-202ENSMUST00000209611 Gm10100J3QK64 120 aa3.2□□□□□ -1.9
Sh3rf1-202ENSMUST00000209611 Lce3bQ9CQM7 98 aa3.2□□□□□ -1.9
Sh3rf1-202ENSMUST00000209611 Krtap4-9B1AQA9 244 aa3.2□□□□□ -1.9
Sh3rf1-202ENSMUST00000209611 Muc16A0A140LJ72 8478 aa3.19□□□□□ -1.9
Sh3rf1-202ENSMUST00000209611 Sprr2gO70558 76 aa3.19□□□□□ -1.9
Sh3rf1-202ENSMUST00000209611 Fsip2A2ARZ3 6995 aa3.17□□□□□ -1.9
Sh3rf1-202ENSMUST00000209611 A030014E15RikA0A1Y7VJV2 120 aa3.16□□□□□ -1.9
Sh3rf1-202ENSMUST00000209611 Lce1dQ9D731 133 aa3.12□□□□□ -1.91
Sh3rf1-202ENSMUST00000209611 Gm11938Q9D3H4 131 aa3.11□□□□□ -1.91
Sh3rf1-202ENSMUST00000209611 Sprr2dO70555 85 aa3.11□□□□□ -1.91
Sh3rf1-202ENSMUST00000209611 Gm10142J3KMP7 120 aa3.1□□□□□ -1.91
Sh3rf1-202ENSMUST00000209611 A0A286YCP9 139 aa3.09□□□□□ -1.92
Sh3rf1-202ENSMUST00000209611 Krtap4-13Q9D7P3 165 aa3.08□□□□□ -1.92
Sh3rf1-202ENSMUST00000209611 Krtap4-7Q9D732 168 aa3.07□□□□□ -1.92
Sh3rf1-202ENSMUST00000209611 2300003K06RikA2A4M0 262 aa3.07□□□□□ -1.92
Sh3rf1-202ENSMUST00000209611 Sprr2iO70560 76 aa3.05□□□□□ -1.92
Sh3rf1-202ENSMUST00000209611 Lce1eQ9D139 143 aa3.05□□□□□ -1.92
Sh3rf1-202ENSMUST00000209611 Krtap19-4Q925H7 84 aa3.04□□□□□ -1.92
Sh3rf1-202ENSMUST00000209611 Lce3cQ91V05 98 aa3.04□□□□□ -1.92
Sh3rf1-202ENSMUST00000209611 Lce1bQ9D149 137 aa3.04□□□□□ -1.92
Sh3rf1-202ENSMUST00000209611 Lce1lQ9D1G7 135 aa3.03□□□□□ -1.92
Sh3rf1-202ENSMUST00000209611 Gm10024A0A0A0MQA4 119 aa2.97□□□□□ -1.93
Sh3rf1-202ENSMUST00000209611 Lce3eF8VQJ0 98 aa2.97□□□□□ -1.93
Sh3rf1-202ENSMUST00000209611 Lce3fQ6PAI4 98 aa2.97□□□□□ -1.93
Sh3rf1-202ENSMUST00000209611 Lce1cQ9D1C5 147 aa2.97□□□□□ -1.93
Sh3rf1-202ENSMUST00000209611 Lce3dE9Q8V1 98 aa2.96□□□□□ -1.94
Sh3rf1-202ENSMUST00000209611 Lce1fB9EJP6 147 aa2.96□□□□□ -1.94
Sh3rf1-202ENSMUST00000209611 Krtap6-3A0A087WQL6 57 aa2.91□□□□□ -1.94
Sh3rf1-202ENSMUST00000209611 Lce3aQ497I5 98 aa2.89□□□□□ -1.95
Sh3rf1-202ENSMUST00000209611 Lce1kJ3QP15 125 aa2.88□□□□□ -1.95
Sh3rf1-202ENSMUST00000209611 Krtap4-16Q91W93 202 aa2.85□□□□□ -1.95
Sh3rf1-202ENSMUST00000209611 Lce1a1Q9CQH5 143 aa2.85□□□□□ -1.95
Sh3rf1-202ENSMUST00000209611 Sprr2fO70557 76 aa2.8□□□□□ -1.96
Sh3rf1-202ENSMUST00000209611 ObscnA2AAJ9 8891 aaKnown RBP2.79□□□□□ -1.96
Sh3rf1-202ENSMUST00000209611 Mt1P02802 61 aaKnown RBP2.77□□□□□ -1.97
Sh3rf1-202ENSMUST00000209611 Krtap20-2E9Q0A8 60 aa2.75□□□□□ -1.97
Sh3rf1-202ENSMUST00000209611 Sprr2hO70559 108 aa2.73□□□□□ -1.97
Sh3rf1-202ENSMUST00000209611 Eppk1Q8R0W0 6548 aa2.69□□□□□ -1.98
Sh3rf1-202ENSMUST00000209611 Gm11568A2A4M2 211 aa2.66□□□□□ -1.98
Sh3rf1-202ENSMUST00000209611 Krtap9-1Q64526 186 aa2.66□□□□□ -1.98
Sh3rf1-202ENSMUST00000209611 Krtap5-2Q9D5Z7 189 aa2.62□□□□□ -1.99
Sh3rf1-202ENSMUST00000209611 Macf1Q9QXZ0 7354 aaKnown RBP2.61□□□□□ -1.99
Sh3rf1-202ENSMUST00000209611 Sprr2eO70556 76 aa2.61□□□□□ -1.99
Sh3rf1-202ENSMUST00000209611 Gm11554B1AQB2 190 aa2.59□□□□□ -1.99
Sh3rf1-202ENSMUST00000209611 Mt3P28184 68 aa2.56□□□□□ -2
Sh3rf1-202ENSMUST00000209611 Gm10153A0A1B0GRL1 320 aa2.54□□□□□ -2
Sh3rf1-202ENSMUST00000209611 Gm11559Q9D3H7 191 aa2.47□□□□□ -2.01
Sh3rf1-202ENSMUST00000209611 Gm45337A0A1B0GS71 263 aa2.42□□□□□ -2.02
Sh3rf1-202ENSMUST00000209611 Gm4553A0A1B0GSA9 284 aa2.42□□□□□ -2.02
Sh3rf1-202ENSMUST00000209611 Kmt2dQ6PDK2 5588 aa2.35□□□□□ -2.03
Sh3rf1-202ENSMUST00000209611 Gm40460A0A1B0GR10 244 aa2.35□□□□□ -2.03
Sh3rf1-202ENSMUST00000209611 Gm7579A0A1B0GRJ4 243 aa2.35□□□□□ -2.03
Sh3rf1-202ENSMUST00000209611 Krtap5-5Q2TA51 241 aa2.35□□□□□ -2.03
Sh3rf1-202ENSMUST00000209611 Krtap5-4Q62220 223 aa2.35□□□□□ -2.03
Sh3rf1-202ENSMUST00000209611 Gm2431E9Q8S1 172 aa2.34□□□□□ -2.03
Sh3rf1-202ENSMUST00000209611 DstQ91ZU6 7393 aaKnown RBP2.33□□□□□ -2.04
Sh3rf1-202ENSMUST00000209611 Hmcn1D3YXG0 5634 aa2.33□□□□□ -2.04
Sh3rf1-202ENSMUST00000209611 Gpr98Q8VHN7 6298 aaKnown RBP2.28□□□□□ -2.05
Sh3rf1-202ENSMUST00000209611 Muc19Q6PZE0 7524 aa2.27□□□□□ -2.05
Sh3rf1-202ENSMUST00000209611 NebE9Q1W3 7152 aa2.22□□□□□ -2.05
Sh3rf1-202ENSMUST00000209611 Gm11639A0A1D5RLM8 5808 aa2.21□□□□□ -2.06
Sh3rf1-202ENSMUST00000209611 Gm39115A0A1B0GSH7 232 aa2.17□□□□□ -2.06
Sh3rf1-202ENSMUST00000209611 Gm45618A0A1B0GSA0 219 aa2.13□□□□□ -2.07
Sh3rf1-202ENSMUST00000209611 1110025L11RikO09048 78 aa2.13□□□□□ -2.07
Sh3rf1-202ENSMUST00000209611 Krtap6-5Q925H3 78 aa2.13□□□□□ -2.07
Sh3rf1-202ENSMUST00000209611 AhnakE9Q616 5656 aaKnown RBP1.99□□□□□ -2.09
Sh3rf1-202ENSMUST00000209611 Sprr2bO70554 98 aa1.95□□□□□ -2.1
Sh3rf1-202ENSMUST00000209611 Gm10229O08631 77 aa1.91□□□□□ -2.1
Sh3rf1-202ENSMUST00000209611 Gm29735A0A1B0GT06 219 aa1.88□□□□□ -2.11
Sh3rf1-202ENSMUST00000209611 Gm11567Q9D141 195 aa1.8□□□□□ -2.12
Sh3rf1-202ENSMUST00000209611 Phgr1Q8K0G7 91 aa1.73□□□□□ -2.13
Sh3rf1-202ENSMUST00000209611 Krtap21-1Q925H4 128 aa1.71□□□□□ -2.14
Sh3rf1-202ENSMUST00000209611 Krtap6-2O08884 159 aa1.61□□□□□ -2.15
Sh3rf1-202ENSMUST00000209611 Krtap5-1Q64507 230 aa1.48□□□□□ -2.17
Sh3rf1-202ENSMUST00000209611 Gm4559A4IF42 199 aa1.37□□□□□ -2.19
Retrieved 80 of 22,080 RNA–protein pairs in 152 ms