RNA–Protein interactions for RNA: ENSMUST00000197984.4

Smarcc1-204, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-204ENSMUST00000197984 Krtap4-16Q91W93 202 aa4.83□□□□□ -1.64
Smarcc1-204ENSMUST00000197984 Krtap19-4Q925H7 84 aa4.82□□□□□ -1.64
Smarcc1-204ENSMUST00000197984 Lce3aQ497I5 98 aa4.8□□□□□ -1.64
Smarcc1-204ENSMUST00000197984 Gm38119A0A0A6YX29 146 aa4.79□□□□□ -1.64
Smarcc1-204ENSMUST00000197984 Krtap4-2B1AQ85 167 aa4.77□□□□□ -1.65
Smarcc1-204ENSMUST00000197984 Lce1gQ9D195 139 aa4.77□□□□□ -1.65
Smarcc1-204ENSMUST00000197984 Mt4P47945 62 aa4.74□□□□□ -1.65
Smarcc1-204ENSMUST00000197984 ObscnA2AAJ9 8891 aaKnown RBP4.72□□□□□ -1.65
Smarcc1-204ENSMUST00000197984 Sprr2hO70559 108 aa4.7□□□□□ -1.66
Smarcc1-204ENSMUST00000197984 Gm11596B1AQB0 205 aa4.68□□□□□ -1.66
Smarcc1-204ENSMUST00000197984 Sprr2fO70557 76 aa4.68□□□□□ -1.66
Smarcc1-204ENSMUST00000197984 Gm11564A2A4L9 201 aa4.67□□□□□ -1.66
Smarcc1-204ENSMUST00000197984 Gm11563B1AQ90 168 aa4.67□□□□□ -1.66
Smarcc1-204ENSMUST00000197984 Gm11595B1AQA7 289 aa4.67□□□□□ -1.66
Smarcc1-204ENSMUST00000197984 Krtap4-8B1AQA8 209 aa4.67□□□□□ -1.66
Smarcc1-204ENSMUST00000197984 Syne2Q6ZWQ0 6874 aaKnown RBP4.66□□□□□ -1.66
Smarcc1-204ENSMUST00000197984 Gm11555B1AQ89 175 aa4.64□□□□□ -1.67
Smarcc1-204ENSMUST00000197984 Krtap4-9B1AQA9 244 aa4.62□□□□□ -1.67
Smarcc1-204ENSMUST00000197984 Sprr2kO70562 68 aa4.58□□□□□ -1.68
Smarcc1-204ENSMUST00000197984 Sprr2eO70556 76 aa4.56□□□□□ -1.68
Smarcc1-204ENSMUST00000197984 Krtap4-13Q9D7P3 165 aa4.49□□□□□ -1.69
Smarcc1-204ENSMUST00000197984 2300003K06RikA2A4M0 262 aa4.47□□□□□ -1.69
Smarcc1-204ENSMUST00000197984 Lce1bQ9D149 137 aa4.39□□□□□ -1.71
Smarcc1-204ENSMUST00000197984 Lce1lQ9D1G7 135 aa4.34□□□□□ -1.71
Smarcc1-204ENSMUST00000197984 Lce1kJ3QP15 125 aa4.32□□□□□ -1.72
Smarcc1-204ENSMUST00000197984 Krtap4-7Q9D732 168 aa4.31□□□□□ -1.72
Smarcc1-204ENSMUST00000197984 Krtap31-2Q8CAY5 177 aa4.25□□□□□ -1.73
Smarcc1-204ENSMUST00000197984 A0A1Y7VJH8 109 aa4.24□□□□□ -1.73
Smarcc1-204ENSMUST00000197984 Macf1Q9QXZ0 7354 aaKnown RBP4.18□□□□□ -1.74
Smarcc1-204ENSMUST00000197984 Gm10024A0A0A0MQA4 119 aa4.16□□□□□ -1.74
Smarcc1-204ENSMUST00000197984 Mt1P02802 61 aaKnown RBP4.13□□□□□ -1.75
Smarcc1-204ENSMUST00000197984 Krtap20-2E9Q0A8 60 aa4.09□□□□□ -1.76
Smarcc1-204ENSMUST00000197984 A0A1Y7VLE6 161 aa4.01□□□□□ -1.77
Smarcc1-204ENSMUST00000197984 Krtap28-10A0A1Y7VP58 119 aa4.01□□□□□ -1.77
Smarcc1-204ENSMUST00000197984 Muc19Q6PZE0 7524 aa4.01□□□□□ -1.77
Smarcc1-204ENSMUST00000197984 Gm11568A2A4M2 211 aa3.98□□□□□ -1.77
Smarcc1-204ENSMUST00000197984 Krtap9-1Q64526 186 aa3.98□□□□□ -1.77
Smarcc1-204ENSMUST00000197984 Krtap28-13A0A087WQP5 138 aa3.95□□□□□ -1.78
Smarcc1-204ENSMUST00000197984 A030005K14RikA0A1Y7VNY1 122 aa3.91□□□□□ -1.78
Smarcc1-204ENSMUST00000197984 Krtap6-3A0A087WQL6 57 aa3.87□□□□□ -1.79
Smarcc1-204ENSMUST00000197984 Krtap5-2Q9D5Z7 189 aa3.75□□□□□ -1.81
Smarcc1-204ENSMUST00000197984 Kmt2dQ6PDK2 5588 aa3.72□□□□□ -1.81
Smarcc1-204ENSMUST00000197984 Gm11554B1AQB2 190 aa3.71□□□□□ -1.82
Smarcc1-204ENSMUST00000197984 Mt3P28184 68 aa3.71□□□□□ -1.82
Smarcc1-204ENSMUST00000197984 Hmcn1D3YXG0 5634 aa3.7□□□□□ -1.82
Smarcc1-204ENSMUST00000197984 A030005L19RikA0A1Y7VIU2 113 aa3.62□□□□□ -1.83
Smarcc1-204ENSMUST00000197984 Gm10153A0A1B0GRL1 320 aa3.6□□□□□ -1.83
Smarcc1-204ENSMUST00000197984 DstQ91ZU6 7393 aaKnown RBP3.6□□□□□ -1.83
Smarcc1-204ENSMUST00000197984 Gm7544A0A1Y7VJ58 118 aa3.56□□□□□ -1.84
Smarcc1-204ENSMUST00000197984 Gm11559Q9D3H7 191 aa3.52□□□□□ -1.85
Smarcc1-204ENSMUST00000197984 A0A1Y7VJ07 166 aa3.49□□□□□ -1.85
Smarcc1-204ENSMUST00000197984 Gm4553A0A1B0GSA9 284 aa3.43□□□□□ -1.86
Smarcc1-204ENSMUST00000197984 A030014E15RikA0A1Y7VJV2 120 aa3.41□□□□□ -1.86
Smarcc1-204ENSMUST00000197984 Gm2431E9Q8S1 172 aa3.39□□□□□ -1.87
Smarcc1-204ENSMUST00000197984 Gm45337A0A1B0GS71 263 aa3.35□□□□□ -1.87
Smarcc1-204ENSMUST00000197984 NebE9Q1W3 7152 aa3.24□□□□□ -1.89
Smarcc1-204ENSMUST00000197984 Gm40460A0A1B0GR10 244 aa3.23□□□□□ -1.89
Smarcc1-204ENSMUST00000197984 Gm7579A0A1B0GRJ4 243 aa3.23□□□□□ -1.89
Smarcc1-204ENSMUST00000197984 Krtap5-5Q2TA51 241 aa3.23□□□□□ -1.89
Smarcc1-204ENSMUST00000197984 Krtap5-4Q62220 223 aa3.23□□□□□ -1.89
Smarcc1-204ENSMUST00000197984 Gm11639A0A1D5RLM8 5808 aa3.19□□□□□ -1.9
Smarcc1-204ENSMUST00000197984 1110025L11RikO09048 78 aa3.17□□□□□ -1.9
Smarcc1-204ENSMUST00000197984 Krtap6-5Q925H3 78 aa3.17□□□□□ -1.9
Smarcc1-204ENSMUST00000197984 Eppk1Q8R0W0 6548 aa3.03□□□□□ -1.92
Smarcc1-204ENSMUST00000197984 A030003K21RikA0A1Y7VIM3 128 aa2.99□□□□□ -1.93
Smarcc1-204ENSMUST00000197984 Gm39115A0A1B0GSH7 232 aa2.97□□□□□ -1.93
Smarcc1-204ENSMUST00000197984 Sprr2bO70554 98 aa2.96□□□□□ -1.94
Smarcc1-204ENSMUST00000197984 AhnakE9Q616 5656 aaKnown RBP2.95□□□□□ -1.94
Smarcc1-204ENSMUST00000197984 Phgr1Q8K0G7 91 aa2.93□□□□□ -1.94
Smarcc1-204ENSMUST00000197984 Gm6217A0A1Y7VJK9 128 aa2.87□□□□□ -1.95
Smarcc1-204ENSMUST00000197984 Gm10229O08631 77 aa2.82□□□□□ -1.96
Smarcc1-204ENSMUST00000197984 A0A286YCP9 139 aa2.79□□□□□ -1.96
Smarcc1-204ENSMUST00000197984 Gpr98Q8VHN7 6298 aaKnown RBP2.78□□□□□ -1.96
Smarcc1-204ENSMUST00000197984 Gm11567Q9D141 195 aa2.67□□□□□ -1.98
Smarcc1-204ENSMUST00000197984 Krtap21-1Q925H4 128 aa2.56□□□□□ -2
Smarcc1-204ENSMUST00000197984 Gm45618A0A1B0GSA0 219 aa2.5□□□□□ -2.01
Smarcc1-204ENSMUST00000197984 Gm29735A0A1B0GT06 219 aa2.42□□□□□ -2.02
Smarcc1-204ENSMUST00000197984 Krtap6-2O08884 159 aa2.39□□□□□ -2.03
Smarcc1-204ENSMUST00000197984 Gm4559A4IF42 199 aa1.64□□□□□ -2.15
Smarcc1-204ENSMUST00000197984 Krtap5-1Q64507 230 aa1.61□□□□□ -2.15
Retrieved 80 of 22,080 RNA–protein pairs in 148.9 ms