RNA–Protein interactions for RNA: ENSMUST00000188275.6

Matr3-209, Transcript of Matrin-3, mousemouse

TSL 5 BASIC

Gene Matr3, Length 1,951 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Matr3-209ENSMUST00000188275 Syne1Q6ZWR6 8799 aa6.55□□□□□ -1.36
Matr3-209ENSMUST00000188275 Lce1dQ9D731 133 aa6.54□□□□□ -1.36
Matr3-209ENSMUST00000188275 Lce3bQ9CQM7 98 aa6.49□□□□□ -1.37
Matr3-209ENSMUST00000188275 Krtap4-7Q9D732 168 aa6.46□□□□□ -1.37
Matr3-209ENSMUST00000188275 Sprr2gO70558 76 aa6.44□□□□□ -1.38
Matr3-209ENSMUST00000188275 Sprr2dO70555 85 aa6.41□□□□□ -1.38
Matr3-209ENSMUST00000188275 A030005K14RikA0A1Y7VNY1 122 aa6.4□□□□□ -1.38
Matr3-209ENSMUST00000188275 Lce1eQ9D139 143 aa6.39□□□□□ -1.39
Matr3-209ENSMUST00000188275 Krtap6-3A0A087WQL6 57 aa6.35□□□□□ -1.39
Matr3-209ENSMUST00000188275 Lce1lQ9D1G7 135 aa6.32□□□□□ -1.4
Matr3-209ENSMUST00000188275 Lce1cQ9D1C5 147 aa6.28□□□□□ -1.4
Matr3-209ENSMUST00000188275 Lce1kJ3QP15 125 aa6.22□□□□□ -1.41
Matr3-209ENSMUST00000188275 Krtap19-4Q925H7 84 aa6.17□□□□□ -1.42
Matr3-209ENSMUST00000188275 Sprr2iO70560 76 aa6.17□□□□□ -1.42
Matr3-209ENSMUST00000188275 A030005L19RikA0A1Y7VIU2 113 aa6.16□□□□□ -1.42
Matr3-209ENSMUST00000188275 Krtap20-2E9Q0A8 60 aa6.12□□□□□ -1.43
Matr3-209ENSMUST00000188275 Lce3cQ91V05 98 aa6.07□□□□□ -1.44
Matr3-209ENSMUST00000188275 Krtap5-2Q9D5Z7 189 aa6.06□□□□□ -1.44
Matr3-209ENSMUST00000188275 Gm11568A2A4M2 211 aa6.04□□□□□ -1.44
Matr3-209ENSMUST00000188275 Krtap9-1Q64526 186 aa6.04□□□□□ -1.44
Matr3-209ENSMUST00000188275 Lce1fB9EJP6 147 aa6.04□□□□□ -1.44
Matr3-209ENSMUST00000188275 4933428G20RikQ9D3X4 101 aa6.01□□□□□ -1.45
Matr3-209ENSMUST00000188275 Lce1a1Q9CQH5 143 aa6□□□□□ -1.45
Matr3-209ENSMUST00000188275 Mt1P02802 61 aaKnown RBP5.99□□□□□ -1.45
Matr3-209ENSMUST00000188275 Lce3dE9Q8V1 98 aa5.97□□□□□ -1.45
Matr3-209ENSMUST00000188275 Lce3eF8VQJ0 98 aa5.96□□□□□ -1.46
Matr3-209ENSMUST00000188275 Lce3fQ6PAI4 98 aa5.96□□□□□ -1.46
Matr3-209ENSMUST00000188275 Gm10100J3QK64 120 aa5.89□□□□□ -1.47
Matr3-209ENSMUST00000188275 Gm7544A0A1Y7VJ58 118 aa5.88□□□□□ -1.47
Matr3-209ENSMUST00000188275 ObscnA2AAJ9 8891 aaKnown RBP5.87□□□□□ -1.47
Matr3-209ENSMUST00000188275 A0A1Y7VJ07 166 aa5.82□□□□□ -1.48
Matr3-209ENSMUST00000188275 Gm10142J3KMP7 120 aa5.73□□□□□ -1.49
Matr3-209ENSMUST00000188275 Lce3aQ497I5 98 aa5.7□□□□□ -1.5
Matr3-209ENSMUST00000188275 Gm10153A0A1B0GRL1 320 aa5.68□□□□□ -1.5
Matr3-209ENSMUST00000188275 Gm9112A2AI92 75 aa5.66□□□□□ -1.5
Matr3-209ENSMUST00000188275 Gm11559Q9D3H7 191 aa5.65□□□□□ -1.51
Matr3-209ENSMUST00000188275 Gm4553A0A1B0GSA9 284 aa5.63□□□□□ -1.51
Matr3-209ENSMUST00000188275 A030014E15RikA0A1Y7VJV2 120 aa5.62□□□□□ -1.51
Matr3-209ENSMUST00000188275 Sprr2hO70559 108 aa5.58□□□□□ -1.52
Matr3-209ENSMUST00000188275 Macf1Q9QXZ0 7354 aaKnown RBP5.57□□□□□ -1.52
Matr3-209ENSMUST00000188275 Gm45337A0A1B0GS71 263 aa5.53□□□□□ -1.52
Matr3-209ENSMUST00000188275 Gm11554B1AQB2 190 aa5.48□□□□□ -1.53
Matr3-209ENSMUST00000188275 Gm2431E9Q8S1 172 aa5.47□□□□□ -1.53
Matr3-209ENSMUST00000188275 Mt3P28184 68 aa5.37□□□□□ -1.55
Matr3-209ENSMUST00000188275 Gm40460A0A1B0GR10 244 aa5.36□□□□□ -1.55
Matr3-209ENSMUST00000188275 Gm7579A0A1B0GRJ4 243 aa5.36□□□□□ -1.55
Matr3-209ENSMUST00000188275 Krtap5-5Q2TA51 241 aa5.36□□□□□ -1.55
Matr3-209ENSMUST00000188275 Krtap5-4Q62220 223 aa5.36□□□□□ -1.55
Matr3-209ENSMUST00000188275 Hmcn1D3YXG0 5634 aa5.33□□□□□ -1.56
Matr3-209ENSMUST00000188275 A030003K21RikA0A1Y7VIM3 128 aa5.24□□□□□ -1.57
Matr3-209ENSMUST00000188275 Kmt2dQ6PDK2 5588 aa5.23□□□□□ -1.57
Matr3-209ENSMUST00000188275 Sprr2eO70556 76 aa5.2□□□□□ -1.58
Matr3-209ENSMUST00000188275 Krtap31-2Q8CAY5 177 aa5.06□□□□□ -1.6
Matr3-209ENSMUST00000188275 Gm39115A0A1B0GSH7 232 aa5.05□□□□□ -1.6
Matr3-209ENSMUST00000188275 Gm6217A0A1Y7VJK9 128 aa4.97□□□□□ -1.61
Matr3-209ENSMUST00000188275 Eppk1Q8R0W0 6548 aa4.94□□□□□ -1.62
Matr3-209ENSMUST00000188275 Krtap31-1Q9D644 177 aa4.91□□□□□ -1.62
Matr3-209ENSMUST00000188275 Gm10024A0A0A0MQA4 119 aa4.84□□□□□ -1.63
Matr3-209ENSMUST00000188275 Muc19Q6PZE0 7524 aa4.83□□□□□ -1.64
Matr3-209ENSMUST00000188275 DstQ91ZU6 7393 aaKnown RBP4.81□□□□□ -1.64
Matr3-209ENSMUST00000188275 Sprr2fO70557 76 aa4.78□□□□□ -1.64
Matr3-209ENSMUST00000188275 Gm11639A0A1D5RLM8 5808 aa4.69□□□□□ -1.66
Matr3-209ENSMUST00000188275 A0A286YCP9 139 aa4.58□□□□□ -1.68
Matr3-209ENSMUST00000188275 Krtap4-16Q91W93 202 aa4.57□□□□□ -1.68
Matr3-209ENSMUST00000188275 Muc16A0A140LJ72 8478 aa4.5□□□□□ -1.69
Matr3-209ENSMUST00000188275 AhnakE9Q616 5656 aaKnown RBP4.47□□□□□ -1.69
Matr3-209ENSMUST00000188275 1110025L11RikO09048 78 aa4.47□□□□□ -1.69
Matr3-209ENSMUST00000188275 Krtap6-5Q925H3 78 aa4.47□□□□□ -1.69
Matr3-209ENSMUST00000188275 Gm45618A0A1B0GSA0 219 aa4.46□□□□□ -1.7
Matr3-209ENSMUST00000188275 NebE9Q1W3 7152 aa4.37□□□□□ -1.71
Matr3-209ENSMUST00000188275 Gpr98Q8VHN7 6298 aaKnown RBP4.3□□□□□ -1.72
Matr3-209ENSMUST00000188275 Gm29735A0A1B0GT06 219 aa4.02□□□□□ -1.77
Matr3-209ENSMUST00000188275 Gm11567Q9D141 195 aa3.98□□□□□ -1.77
Matr3-209ENSMUST00000188275 Gm10229O08631 77 aa3.97□□□□□ -1.77
Matr3-209ENSMUST00000188275 Sprr2bO70554 98 aa3.79□□□□□ -1.8
Matr3-209ENSMUST00000188275 Krtap21-1Q925H4 128 aa3.67□□□□□ -1.82
Matr3-209ENSMUST00000188275 Krtap6-2O08884 159 aa3.42□□□□□ -1.86
Matr3-209ENSMUST00000188275 Phgr1Q8K0G7 91 aa3.31□□□□□ -1.88
Matr3-209ENSMUST00000188275 Krtap5-1Q64507 230 aa2.65□□□□□ -1.98
Matr3-209ENSMUST00000188275 Gm4559A4IF42 199 aa2.5□□□□□ -2.01
Retrieved 80 of 22,080 RNA–protein pairs in 6.6 ms