RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Krtap4-13Q9D7P3 165 aa8.85□□□□□ -0.99
Ldb1-208ENSMUST00000185355 Gm38119A0A0A6YX29 146 aa8.84□□□□□ -0.99
Ldb1-208ENSMUST00000185355 Lce3bQ9CQM7 98 aa8.84□□□□□ -0.99
Ldb1-208ENSMUST00000185355 Syne1Q6ZWR6 8799 aa8.77□□□□□ -1.01
Ldb1-208ENSMUST00000185355 Sprr2kO70562 68 aa8.71□□□□□ -1.02
Ldb1-208ENSMUST00000185355 Gm10100J3QK64 120 aa8.69□□□□□ -1.02
Ldb1-208ENSMUST00000185355 2300003K06RikA2A4M0 262 aa8.66□□□□□ -1.02
Ldb1-208ENSMUST00000185355 Lce1fB9EJP6 147 aa8.59□□□□□ -1.03
Ldb1-208ENSMUST00000185355 Lce1a1Q9CQH5 143 aa8.59□□□□□ -1.03
Ldb1-208ENSMUST00000185355 Gm10142J3KMP7 120 aa8.5□□□□□ -1.05
Ldb1-208ENSMUST00000185355 Krtap6-3A0A087WQL6 57 aa8.47□□□□□ -1.05
Ldb1-208ENSMUST00000185355 Krtap4-7Q9D732 168 aa8.46□□□□□ -1.05
Ldb1-208ENSMUST00000185355 Lce3cQ91V05 98 aa8.43□□□□□ -1.06
Ldb1-208ENSMUST00000185355 Lce3eF8VQJ0 98 aa8.38□□□□□ -1.07
Ldb1-208ENSMUST00000185355 Lce3fQ6PAI4 98 aa8.38□□□□□ -1.07
Ldb1-208ENSMUST00000185355 Lce1lQ9D1G7 135 aa8.38□□□□□ -1.07
Ldb1-208ENSMUST00000185355 Lce3dE9Q8V1 98 aa8.31□□□□□ -1.08
Ldb1-208ENSMUST00000185355 Sprr2hO70559 108 aa8.25□□□□□ -1.09
Ldb1-208ENSMUST00000185355 Mt1P02802 61 aaKnown RBP8.12□□□□□ -1.11
Ldb1-208ENSMUST00000185355 ObscnA2AAJ9 8891 aaKnown RBP8.1□□□□□ -1.11
Ldb1-208ENSMUST00000185355 Sprr2iO70560 76 aa8.1□□□□□ -1.11
Ldb1-208ENSMUST00000185355 Lce1kJ3QP15 125 aa8.08□□□□□ -1.12
Ldb1-208ENSMUST00000185355 Lce3aQ497I5 98 aa8.02□□□□□ -1.12
Ldb1-208ENSMUST00000185355 A0A1Y7VJH8 109 aa7.99□□□□□ -1.13
Ldb1-208ENSMUST00000185355 Sprr2eO70556 76 aa7.99□□□□□ -1.13
Ldb1-208ENSMUST00000185355 Krtap20-2E9Q0A8 60 aa7.93□□□□□ -1.14
Ldb1-208ENSMUST00000185355 Gm11568A2A4M2 211 aa7.82□□□□□ -1.16
Ldb1-208ENSMUST00000185355 Krtap9-1Q64526 186 aa7.82□□□□□ -1.16
Ldb1-208ENSMUST00000185355 Krtap5-2Q9D5Z7 189 aa7.79□□□□□ -1.16
Ldb1-208ENSMUST00000185355 Sprr2fO70557 76 aa7.62□□□□□ -1.19
Ldb1-208ENSMUST00000185355 Krtap31-1Q9D644 177 aa7.51□□□□□ -1.21
Ldb1-208ENSMUST00000185355 Gm10153A0A1B0GRL1 320 aa7.43□□□□□ -1.22
Ldb1-208ENSMUST00000185355 Gm11559Q9D3H7 191 aa7.39□□□□□ -1.23
Ldb1-208ENSMUST00000185355 Macf1Q9QXZ0 7354 aaKnown RBP7.35□□□□□ -1.23
Ldb1-208ENSMUST00000185355 Gm4553A0A1B0GSA9 284 aa7.29□□□□□ -1.24
Ldb1-208ENSMUST00000185355 Gm11554B1AQB2 190 aa7.23□□□□□ -1.25
Ldb1-208ENSMUST00000185355 Mt3P28184 68 aa7.22□□□□□ -1.25
Ldb1-208ENSMUST00000185355 A0A1Y7VLE6 161 aa7.12□□□□□ -1.27
Ldb1-208ENSMUST00000185355 Gm45337A0A1B0GS71 263 aa7.11□□□□□ -1.27
Ldb1-208ENSMUST00000185355 Gm2431E9Q8S1 172 aa7.07□□□□□ -1.28
Ldb1-208ENSMUST00000185355 Gm10024A0A0A0MQA4 119 aa7.04□□□□□ -1.28
Ldb1-208ENSMUST00000185355 Krtap4-16Q91W93 202 aa6.96□□□□□ -1.3
Ldb1-208ENSMUST00000185355 Hmcn1D3YXG0 5634 aa6.95□□□□□ -1.3
Ldb1-208ENSMUST00000185355 A030005L19RikA0A1Y7VIU2 113 aa6.94□□□□□ -1.3
Ldb1-208ENSMUST00000185355 Kmt2dQ6PDK2 5588 aa6.94□□□□□ -1.3
Ldb1-208ENSMUST00000185355 Gm40460A0A1B0GR10 244 aa6.89□□□□□ -1.31
Ldb1-208ENSMUST00000185355 Gm7579A0A1B0GRJ4 243 aa6.89□□□□□ -1.31
Ldb1-208ENSMUST00000185355 Krtap5-5Q2TA51 241 aa6.89□□□□□ -1.31
Ldb1-208ENSMUST00000185355 Krtap5-4Q62220 223 aa6.89□□□□□ -1.31
Ldb1-208ENSMUST00000185355 Eppk1Q8R0W0 6548 aa6.75□□□□□ -1.33
Ldb1-208ENSMUST00000185355 Gm39115A0A1B0GSH7 232 aa6.56□□□□□ -1.36
Ldb1-208ENSMUST00000185355 Muc19Q6PZE0 7524 aa6.51□□□□□ -1.37
Ldb1-208ENSMUST00000185355 Gm11639A0A1D5RLM8 5808 aa6.39□□□□□ -1.39
Ldb1-208ENSMUST00000185355 DstQ91ZU6 7393 aaKnown RBP6.38□□□□□ -1.39
Ldb1-208ENSMUST00000185355 1110025L11RikO09048 78 aa6.21□□□□□ -1.42
Ldb1-208ENSMUST00000185355 Krtap6-5Q925H3 78 aa6.21□□□□□ -1.42
Ldb1-208ENSMUST00000185355 Muc16A0A140LJ72 8478 aa6.12□□□□□ -1.43
Ldb1-208ENSMUST00000185355 AhnakE9Q616 5656 aaKnown RBP5.94□□□□□ -1.46
Ldb1-208ENSMUST00000185355 NebE9Q1W3 7152 aa5.92□□□□□ -1.46
Ldb1-208ENSMUST00000185355 Gpr98Q8VHN7 6298 aaKnown RBP5.89□□□□□ -1.47
Ldb1-208ENSMUST00000185355 Gm45618A0A1B0GSA0 219 aa5.89□□□□□ -1.47
Ldb1-208ENSMUST00000185355 Sprr2bO70554 98 aa5.7□□□□□ -1.5
Ldb1-208ENSMUST00000185355 A0A1Y7VJ07 166 aa5.68□□□□□ -1.5
Ldb1-208ENSMUST00000185355 Gm10229O08631 77 aa5.49□□□□□ -1.53
Ldb1-208ENSMUST00000185355 Gm29735A0A1B0GT06 219 aa5.22□□□□□ -1.57
Ldb1-208ENSMUST00000185355 Gm11567Q9D141 195 aa5.21□□□□□ -1.58
Ldb1-208ENSMUST00000185355 Krtap21-1Q925H4 128 aa5.1□□□□□ -1.59
Ldb1-208ENSMUST00000185355 Krtap31-2Q8CAY5 177 aa4.92□□□□□ -1.62
Ldb1-208ENSMUST00000185355 Phgr1Q8K0G7 91 aa4.88□□□□□ -1.63
Ldb1-208ENSMUST00000185355 A0A286YCP9 139 aa4.84□□□□□ -1.63
Ldb1-208ENSMUST00000185355 Krtap6-2O08884 159 aa4.63□□□□□ -1.67
Ldb1-208ENSMUST00000185355 Krtap28-10A0A1Y7VP58 119 aa3.71□□□□□ -1.82
Ldb1-208ENSMUST00000185355 A030003K21RikA0A1Y7VIM3 128 aa3.68□□□□□ -1.82
Ldb1-208ENSMUST00000185355 Krtap28-13A0A087WQP5 138 aa3.67□□□□□ -1.82
Ldb1-208ENSMUST00000185355 A030005K14RikA0A1Y7VNY1 122 aa3.61□□□□□ -1.83
Ldb1-208ENSMUST00000185355 Krtap5-1Q64507 230 aa3.56□□□□□ -1.84
Ldb1-208ENSMUST00000185355 Gm7544A0A1Y7VJ58 118 aa3.27□□□□□ -1.89
Ldb1-208ENSMUST00000185355 A030014E15RikA0A1Y7VJV2 120 aa3.25□□□□□ -1.89
Ldb1-208ENSMUST00000185355 Gm4559A4IF42 199 aa2.98□□□□□ -1.93
Ldb1-208ENSMUST00000185355 Gm6217A0A1Y7VJK9 128 aa2.71□□□□□ -1.98
Retrieved 80 of 22,080 RNA–protein pairs in 11.3 ms