RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 Lce1cQ9D1C5 147 aa6.48□□□□□ -1.37
Sox1-201ENSMUST00000180353 Lce1lQ9D1G7 135 aa6.48□□□□□ -1.37
Sox1-201ENSMUST00000180353 Lce1bQ9D149 137 aa6.44□□□□□ -1.38
Sox1-201ENSMUST00000180353 Lce1eQ9D139 143 aa6.42□□□□□ -1.38
Sox1-201ENSMUST00000180353 Sprr2eO70556 76 aa6.39□□□□□ -1.39
Sox1-201ENSMUST00000180353 Mt4P47945 62 aa6.37□□□□□ -1.39
Sox1-201ENSMUST00000180353 Gm11562A0PK51 136 aa6.35□□□□□ -1.39
Sox1-201ENSMUST00000180353 Krtap4-16Q91W93 202 aa6.28□□□□□ -1.4
Sox1-201ENSMUST00000180353 Krtap4-1Q3UUY3 169 aa6.23□□□□□ -1.41
Sox1-201ENSMUST00000180353 Muc5bE9Q5I3 4800 aa6.2□□□□□ -1.42
Sox1-201ENSMUST00000180353 Gm11596B1AQB0 205 aa6.19□□□□□ -1.42
Sox1-201ENSMUST00000180353 Fsip2A2ARZ3 6995 aa6.18□□□□□ -1.42
Sox1-201ENSMUST00000180353 Gm11564A2A4L9 201 aa6.09□□□□□ -1.44
Sox1-201ENSMUST00000180353 Gm11563B1AQ90 168 aa6.09□□□□□ -1.44
Sox1-201ENSMUST00000180353 Gm11595B1AQA7 289 aa6.09□□□□□ -1.44
Sox1-201ENSMUST00000180353 Krtap4-8B1AQA8 209 aa6.09□□□□□ -1.44
Sox1-201ENSMUST00000180353 Krtap4-9B1AQA9 244 aa6.05□□□□□ -1.44
Sox1-201ENSMUST00000180353 Muc16A0A140LJ72 8478 aa6.03□□□□□ -1.44
Sox1-201ENSMUST00000180353 Lce1a1Q9CQH5 143 aa5.99□□□□□ -1.45
Sox1-201ENSMUST00000180353 Syne2Q6ZWQ0 6874 aaKnown RBP5.97□□□□□ -1.45
Sox1-201ENSMUST00000180353 Krtap31-2Q8CAY5 177 aa5.96□□□□□ -1.45
Sox1-201ENSMUST00000180353 SspoQ8CG65 4998 aa5.95□□□□□ -1.46
Sox1-201ENSMUST00000180353 2300003K06RikA2A4M0 262 aa5.9□□□□□ -1.46
Sox1-201ENSMUST00000180353 Krtap4-13Q9D7P3 165 aa5.89□□□□□ -1.47
Sox1-201ENSMUST00000180353 Krtap4-7Q9D732 168 aa5.83□□□□□ -1.48
Sox1-201ENSMUST00000180353 Lce1kJ3QP15 125 aa5.73□□□□□ -1.49
Sox1-201ENSMUST00000180353 ObscnA2AAJ9 8891 aaKnown RBP5.55□□□□□ -1.52
Sox1-201ENSMUST00000180353 Gm11555B1AQ89 175 aa5.5□□□□□ -1.53
Sox1-201ENSMUST00000180353 Macf1Q9QXZ0 7354 aaKnown RBP5.45□□□□□ -1.54
Sox1-201ENSMUST00000180353 Mt1P02802 61 aaKnown RBP5.42□□□□□ -1.54
Sox1-201ENSMUST00000180353 Krtap6-3A0A087WQL6 57 aa5.4□□□□□ -1.55
Sox1-201ENSMUST00000180353 Mt3P28184 68 aa5.39□□□□□ -1.55
Sox1-201ENSMUST00000180353 Gm11554B1AQB2 190 aa5.17□□□□□ -1.58
Sox1-201ENSMUST00000180353 Krtap20-2E9Q0A8 60 aa5.14□□□□□ -1.59
Sox1-201ENSMUST00000180353 Sprr2bO70554 98 aa4.96□□□□□ -1.62
Sox1-201ENSMUST00000180353 DstQ91ZU6 7393 aaKnown RBP4.93□□□□□ -1.62
Sox1-201ENSMUST00000180353 Eppk1Q8R0W0 6548 aa4.9□□□□□ -1.62
Sox1-201ENSMUST00000180353 NebE9Q1W3 7152 aa4.86□□□□□ -1.63
Sox1-201ENSMUST00000180353 Muc19Q6PZE0 7524 aa4.69□□□□□ -1.66
Sox1-201ENSMUST00000180353 Kmt2dQ6PDK2 5588 aa4.63□□□□□ -1.67
Sox1-201ENSMUST00000180353 Gm11568A2A4M2 211 aa4.38□□□□□ -1.71
Sox1-201ENSMUST00000180353 Krtap9-1Q64526 186 aa4.38□□□□□ -1.71
Sox1-201ENSMUST00000180353 1110025L11RikO09048 78 aa4.37□□□□□ -1.71
Sox1-201ENSMUST00000180353 Krtap6-5Q925H3 78 aa4.37□□□□□ -1.71
Sox1-201ENSMUST00000180353 Gm11559Q9D3H7 191 aa4.26□□□□□ -1.73
Sox1-201ENSMUST00000180353 Gpr98Q8VHN7 6298 aaKnown RBP4.25□□□□□ -1.73
Sox1-201ENSMUST00000180353 Gm11639A0A1D5RLM8 5808 aa4.22□□□□□ -1.73
Sox1-201ENSMUST00000180353 Krtap5-2Q9D5Z7 189 aa4.17□□□□□ -1.74
Sox1-201ENSMUST00000180353 Phgr1Q8K0G7 91 aa4.15□□□□□ -1.75
Sox1-201ENSMUST00000180353 Gm10229O08631 77 aa4.03□□□□□ -1.76
Sox1-201ENSMUST00000180353 Hmcn1D3YXG0 5634 aa3.99□□□□□ -1.77
Sox1-201ENSMUST00000180353 Gm4553A0A1B0GSA9 284 aa3.96□□□□□ -1.78
Sox1-201ENSMUST00000180353 A0A1Y7VJH8 109 aa3.93□□□□□ -1.78
Sox1-201ENSMUST00000180353 A030005L19RikA0A1Y7VIU2 113 aa3.84□□□□□ -1.79
Sox1-201ENSMUST00000180353 Gm2431E9Q8S1 172 aa3.81□□□□□ -1.8
Sox1-201ENSMUST00000180353 Gm10153A0A1B0GRL1 320 aa3.69□□□□□ -1.82
Sox1-201ENSMUST00000180353 Gm45337A0A1B0GS71 263 aa3.67□□□□□ -1.82
Sox1-201ENSMUST00000180353 Gm40460A0A1B0GR10 244 aa3.56□□□□□ -1.84
Sox1-201ENSMUST00000180353 Gm7579A0A1B0GRJ4 243 aa3.56□□□□□ -1.84
Sox1-201ENSMUST00000180353 Krtap5-5Q2TA51 241 aa3.56□□□□□ -1.84
Sox1-201ENSMUST00000180353 Krtap5-4Q62220 223 aa3.56□□□□□ -1.84
Sox1-201ENSMUST00000180353 AhnakE9Q616 5656 aaKnown RBP3.49□□□□□ -1.85
Sox1-201ENSMUST00000180353 Krtap28-10A0A1Y7VP58 119 aa3.45□□□□□ -1.86
Sox1-201ENSMUST00000180353 Krtap28-13A0A087WQP5 138 aa3.44□□□□□ -1.86
Sox1-201ENSMUST00000180353 Gm39115A0A1B0GSH7 232 aa3.43□□□□□ -1.86
Sox1-201ENSMUST00000180353 A0A1Y7VLE6 161 aa3.43□□□□□ -1.86
Sox1-201ENSMUST00000180353 Gm11567Q9D141 195 aa3.4□□□□□ -1.86
Sox1-201ENSMUST00000180353 A030005K14RikA0A1Y7VNY1 122 aa3.36□□□□□ -1.87
Sox1-201ENSMUST00000180353 Krtap6-2O08884 159 aa3.27□□□□□ -1.89
Sox1-201ENSMUST00000180353 Krtap21-1Q925H4 128 aa3.26□□□□□ -1.89
Sox1-201ENSMUST00000180353 A030003K21RikA0A1Y7VIM3 128 aa3.22□□□□□ -1.89
Sox1-201ENSMUST00000180353 A0A1Y7VJ07 166 aa3.22□□□□□ -1.89
Sox1-201ENSMUST00000180353 Gm45618A0A1B0GSA0 219 aa3.1□□□□□ -1.91
Sox1-201ENSMUST00000180353 A030014E15RikA0A1Y7VJV2 120 aa3.1□□□□□ -1.91
Sox1-201ENSMUST00000180353 Gm7544A0A1Y7VJ58 118 aa3.09□□□□□ -1.91
Sox1-201ENSMUST00000180353 Gm6217A0A1Y7VJK9 128 aa3.02□□□□□ -1.93
Sox1-201ENSMUST00000180353 Gm29735A0A1B0GT06 219 aa2.63□□□□□ -1.99
Sox1-201ENSMUST00000180353 A0A286YCP9 139 aa2.5□□□□□ -2.01
Sox1-201ENSMUST00000180353 Krtap5-1Q64507 230 aa2.05□□□□□ -2.08
Sox1-201ENSMUST00000180353 Gm4559A4IF42 199 aa1.47□□□□□ -2.17
Retrieved 80 of 22,080 RNA–protein pairs in 12.7 ms