RNA–Protein interactions for RNA: ENSMUST00000160422.7

Cpsf4-202, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Cpsf4, Length 1,756 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-202ENSMUST00000160422 Lce1a1Q9CQH5 143 aa6.69□□□□□ -1.34
Cpsf4-202ENSMUST00000160422 Lce1dQ9D731 133 aa6.64□□□□□ -1.35
Cpsf4-202ENSMUST00000160422 Gm11938Q9D3H4 131 aa6.64□□□□□ -1.35
Cpsf4-202ENSMUST00000160422 Krtap20-2E9Q0A8 60 aa6.61□□□□□ -1.35
Cpsf4-202ENSMUST00000160422 A0A1Y7VJH8 109 aa6.58□□□□□ -1.36
Cpsf4-202ENSMUST00000160422 Lce3bQ9CQM7 98 aa6.54□□□□□ -1.36
Cpsf4-202ENSMUST00000160422 Syne1Q6ZWR6 8799 aa6.53□□□□□ -1.36
Cpsf4-202ENSMUST00000160422 Sprr2dO70555 85 aa6.48□□□□□ -1.37
Cpsf4-202ENSMUST00000160422 Lce1kJ3QP15 125 aa6.42□□□□□ -1.38
Cpsf4-202ENSMUST00000160422 Sprr2iO70560 76 aa6.42□□□□□ -1.38
Cpsf4-202ENSMUST00000160422 4933428G20RikQ9D3X4 101 aa6.41□□□□□ -1.38
Cpsf4-202ENSMUST00000160422 Krtap5-2Q9D5Z7 189 aa6.41□□□□□ -1.38
Cpsf4-202ENSMUST00000160422 Lce1eQ9D139 143 aa6.4□□□□□ -1.38
Cpsf4-202ENSMUST00000160422 Gm11568A2A4M2 211 aa6.24□□□□□ -1.41
Cpsf4-202ENSMUST00000160422 Krtap9-1Q64526 186 aa6.24□□□□□ -1.41
Cpsf4-202ENSMUST00000160422 Gm11559Q9D3H7 191 aa6.21□□□□□ -1.41
Cpsf4-202ENSMUST00000160422 Krtap19-4Q925H7 84 aa6.21□□□□□ -1.42
Cpsf4-202ENSMUST00000160422 Lce1cQ9D1C5 147 aa6.17□□□□□ -1.42
Cpsf4-202ENSMUST00000160422 Macf1Q9QXZ0 7354 aaKnown RBP6.11□□□□□ -1.43
Cpsf4-202ENSMUST00000160422 Gm11554B1AQB2 190 aa6.09□□□□□ -1.43
Cpsf4-202ENSMUST00000160422 Lce1fB9EJP6 147 aa6.09□□□□□ -1.43
Cpsf4-202ENSMUST00000160422 Mt1P02802 61 aaKnown RBP6.08□□□□□ -1.44
Cpsf4-202ENSMUST00000160422 Lce3cQ91V05 98 aa6.08□□□□□ -1.44
Cpsf4-202ENSMUST00000160422 Gm4553A0A1B0GSA9 284 aa6.07□□□□□ -1.44
Cpsf4-202ENSMUST00000160422 Eppk1Q8R0W0 6548 aa6.06□□□□□ -1.44
Cpsf4-202ENSMUST00000160422 Lce3dE9Q8V1 98 aa6.01□□□□□ -1.45
Cpsf4-202ENSMUST00000160422 Kmt2dQ6PDK2 5588 aa5.99□□□□□ -1.45
Cpsf4-202ENSMUST00000160422 A030005L19RikA0A1Y7VIU2 113 aa5.98□□□□□ -1.45
Cpsf4-202ENSMUST00000160422 Lce3eF8VQJ0 98 aa5.95□□□□□ -1.46
Cpsf4-202ENSMUST00000160422 Lce3fQ6PAI4 98 aa5.95□□□□□ -1.46
Cpsf4-202ENSMUST00000160422 Gm2431E9Q8S1 172 aa5.91□□□□□ -1.46
Cpsf4-202ENSMUST00000160422 ObscnA2AAJ9 8891 aaKnown RBP5.87□□□□□ -1.47
Cpsf4-202ENSMUST00000160422 Gm10100J3QK64 120 aa5.87□□□□□ -1.47
Cpsf4-202ENSMUST00000160422 Gm45337A0A1B0GS71 263 aa5.86□□□□□ -1.47
Cpsf4-202ENSMUST00000160422 Gm10153A0A1B0GRL1 320 aa5.84□□□□□ -1.47
Cpsf4-202ENSMUST00000160422 Hmcn1D3YXG0 5634 aa5.76□□□□□ -1.49
Cpsf4-202ENSMUST00000160422 Gm10142J3KMP7 120 aa5.75□□□□□ -1.49
Cpsf4-202ENSMUST00000160422 Gm11639A0A1D5RLM8 5808 aa5.72□□□□□ -1.49
Cpsf4-202ENSMUST00000160422 Lce3aQ497I5 98 aa5.7□□□□□ -1.5
Cpsf4-202ENSMUST00000160422 Gm40460A0A1B0GR10 244 aa5.65□□□□□ -1.5
Cpsf4-202ENSMUST00000160422 Gm7579A0A1B0GRJ4 243 aa5.65□□□□□ -1.5
Cpsf4-202ENSMUST00000160422 Krtap5-5Q2TA51 241 aa5.65□□□□□ -1.5
Cpsf4-202ENSMUST00000160422 Krtap5-4Q62220 223 aa5.65□□□□□ -1.5
Cpsf4-202ENSMUST00000160422 Muc19Q6PZE0 7524 aa5.63□□□□□ -1.51
Cpsf4-202ENSMUST00000160422 Sprr2hO70559 108 aa5.62□□□□□ -1.51
Cpsf4-202ENSMUST00000160422 Gm39115A0A1B0GSH7 232 aa5.5□□□□□ -1.53
Cpsf4-202ENSMUST00000160422 Mt3P28184 68 aa5.49□□□□□ -1.53
Cpsf4-202ENSMUST00000160422 Sprr2eO70556 76 aa5.47□□□□□ -1.53
Cpsf4-202ENSMUST00000160422 DstQ91ZU6 7393 aaKnown RBP5.44□□□□□ -1.54
Cpsf4-202ENSMUST00000160422 A0A1Y7VLE6 161 aa5.42□□□□□ -1.54
Cpsf4-202ENSMUST00000160422 Gpr98Q8VHN7 6298 aaKnown RBP5.34□□□□□ -1.55
Cpsf4-202ENSMUST00000160422 Sprr2fO70557 76 aa5.2□□□□□ -1.58
Cpsf4-202ENSMUST00000160422 NebE9Q1W3 7152 aa5.18□□□□□ -1.58
Cpsf4-202ENSMUST00000160422 AhnakE9Q616 5656 aaKnown RBP5.1□□□□□ -1.59
Cpsf4-202ENSMUST00000160422 Krtap4-16Q91W93 202 aa5.09□□□□□ -1.6
Cpsf4-202ENSMUST00000160422 Krtap31-1Q9D644 177 aa5.06□□□□□ -1.6
Cpsf4-202ENSMUST00000160422 Gm45618A0A1B0GSA0 219 aa5.05□□□□□ -1.6
Cpsf4-202ENSMUST00000160422 Gm10024A0A0A0MQA4 119 aa4.83□□□□□ -1.64
Cpsf4-202ENSMUST00000160422 Krtap31-2Q8CAY5 177 aa4.78□□□□□ -1.64
Cpsf4-202ENSMUST00000160422 1110025L11RikO09048 78 aa4.53□□□□□ -1.69
Cpsf4-202ENSMUST00000160422 Krtap6-5Q925H3 78 aa4.53□□□□□ -1.69
Cpsf4-202ENSMUST00000160422 A0A1Y7VJ07 166 aa4.45□□□□□ -1.7
Cpsf4-202ENSMUST00000160422 Muc16A0A140LJ72 8478 aa4.31□□□□□ -1.72
Cpsf4-202ENSMUST00000160422 Gm29735A0A1B0GT06 219 aa4.18□□□□□ -1.74
Cpsf4-202ENSMUST00000160422 Gm11567Q9D141 195 aa4.03□□□□□ -1.76
Cpsf4-202ENSMUST00000160422 Gm10229O08631 77 aa4.02□□□□□ -1.77
Cpsf4-202ENSMUST00000160422 Sprr2bO70554 98 aa3.96□□□□□ -1.78
Cpsf4-202ENSMUST00000160422 Krtap21-1Q925H4 128 aa3.71□□□□□ -1.82
Cpsf4-202ENSMUST00000160422 Krtap6-2O08884 159 aa3.48□□□□□ -1.85
Cpsf4-202ENSMUST00000160422 A0A286YCP9 139 aa3.45□□□□□ -1.86
Cpsf4-202ENSMUST00000160422 Phgr1Q8K0G7 91 aa3.31□□□□□ -1.88
Cpsf4-202ENSMUST00000160422 A030003K21RikA0A1Y7VIM3 128 aa3.23□□□□□ -1.89
Cpsf4-202ENSMUST00000160422 Krtap5-1Q64507 230 aa3.1□□□□□ -1.91
Cpsf4-202ENSMUST00000160422 Krtap28-10A0A1Y7VP58 119 aa3.07□□□□□ -1.92
Cpsf4-202ENSMUST00000160422 Krtap28-13A0A087WQP5 138 aa3.06□□□□□ -1.92
Cpsf4-202ENSMUST00000160422 A030005K14RikA0A1Y7VNY1 122 aa3.02□□□□□ -1.93
Cpsf4-202ENSMUST00000160422 Gm7544A0A1Y7VJ58 118 aa2.87□□□□□ -1.95
Cpsf4-202ENSMUST00000160422 A030014E15RikA0A1Y7VJV2 120 aa2.68□□□□□ -1.98
Cpsf4-202ENSMUST00000160422 Gm6217A0A1Y7VJK9 128 aa2.59□□□□□ -1.99
Cpsf4-202ENSMUST00000160422 Gm4559A4IF42 199 aa2.42□□□□□ -2.02
Retrieved 80 of 22,080 RNA–protein pairs in 130.3 ms