RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Krtap4-13Q9D7P3 165 aa5.14□□□□□ -1.59
Trim39-203ENSMUST00000113706 Lce3bQ9CQM7 98 aa5.14□□□□□ -1.59
Trim39-203ENSMUST00000113706 4933428G20RikQ9D3X4 101 aa5.13□□□□□ -1.59
Trim39-203ENSMUST00000113706 2300003K06RikA2A4M0 262 aa5.1□□□□□ -1.59
Trim39-203ENSMUST00000113706 Sprr2kO70562 68 aa5.04□□□□□ -1.6
Trim39-203ENSMUST00000113706 Krtap19-4Q925H7 84 aa5.01□□□□□ -1.61
Trim39-203ENSMUST00000113706 Lce1fB9EJP6 147 aa4.96□□□□□ -1.62
Trim39-203ENSMUST00000113706 Lce1a1Q9CQH5 143 aa4.96□□□□□ -1.62
Trim39-203ENSMUST00000113706 Krtap4-7Q9D732 168 aa4.94□□□□□ -1.62
Trim39-203ENSMUST00000113706 Gm10100J3QK64 120 aa4.89□□□□□ -1.63
Trim39-203ENSMUST00000113706 Lce3cQ91V05 98 aa4.85□□□□□ -1.63
Trim39-203ENSMUST00000113706 Lce1kJ3QP15 125 aa4.83□□□□□ -1.64
Trim39-203ENSMUST00000113706 Sprr2iO70560 76 aa4.81□□□□□ -1.64
Trim39-203ENSMUST00000113706 Krtap31-1Q9D644 177 aa4.8□□□□□ -1.64
Trim39-203ENSMUST00000113706 Lce1lQ9D1G7 135 aa4.8□□□□□ -1.64
Trim39-203ENSMUST00000113706 A0A1Y7VJH8 109 aa4.78□□□□□ -1.64
Trim39-203ENSMUST00000113706 Lce3eF8VQJ0 98 aa4.78□□□□□ -1.64
Trim39-203ENSMUST00000113706 Lce3fQ6PAI4 98 aa4.78□□□□□ -1.64
Trim39-203ENSMUST00000113706 Gm10142J3KMP7 120 aa4.78□□□□□ -1.64
Trim39-203ENSMUST00000113706 Krtap6-3A0A087WQL6 57 aa4.77□□□□□ -1.65
Trim39-203ENSMUST00000113706 Lce3dE9Q8V1 98 aa4.76□□□□□ -1.65
Trim39-203ENSMUST00000113706 ObscnA2AAJ9 8891 aaKnown RBP4.74□□□□□ -1.65
Trim39-203ENSMUST00000113706 Mt1P02802 61 aaKnown RBP4.73□□□□□ -1.65
Trim39-203ENSMUST00000113706 Krtap20-2E9Q0A8 60 aa4.7□□□□□ -1.66
Trim39-203ENSMUST00000113706 Gm11568A2A4M2 211 aa4.68□□□□□ -1.66
Trim39-203ENSMUST00000113706 Krtap9-1Q64526 186 aa4.68□□□□□ -1.66
Trim39-203ENSMUST00000113706 Muc16A0A140LJ72 8478 aa4.67□□□□□ -1.66
Trim39-203ENSMUST00000113706 Sprr2hO70559 108 aa4.66□□□□□ -1.66
Trim39-203ENSMUST00000113706 Krtap5-2Q9D5Z7 189 aa4.65□□□□□ -1.66
Trim39-203ENSMUST00000113706 Lce3aQ497I5 98 aa4.57□□□□□ -1.68
Trim39-203ENSMUST00000113706 Sprr2eO70556 76 aa4.46□□□□□ -1.69
Trim39-203ENSMUST00000113706 Gm10153A0A1B0GRL1 320 aa4.41□□□□□ -1.7
Trim39-203ENSMUST00000113706 Krtap4-16Q91W93 202 aa4.35□□□□□ -1.71
Trim39-203ENSMUST00000113706 Macf1Q9QXZ0 7354 aaKnown RBP4.34□□□□□ -1.72
Trim39-203ENSMUST00000113706 Gm4553A0A1B0GSA9 284 aa4.3□□□□□ -1.72
Trim39-203ENSMUST00000113706 Gm11559Q9D3H7 191 aa4.29□□□□□ -1.72
Trim39-203ENSMUST00000113706 Sprr2fO70557 76 aa4.25□□□□□ -1.73
Trim39-203ENSMUST00000113706 Gm45337A0A1B0GS71 263 aa4.25□□□□□ -1.73
Trim39-203ENSMUST00000113706 Mt3P28184 68 aa4.21□□□□□ -1.74
Trim39-203ENSMUST00000113706 Krtap31-2Q8CAY5 177 aa4.19□□□□□ -1.74
Trim39-203ENSMUST00000113706 A0A1Y7VLE6 161 aa4.17□□□□□ -1.74
Trim39-203ENSMUST00000113706 Gm2431E9Q8S1 172 aa4.17□□□□□ -1.74
Trim39-203ENSMUST00000113706 Hmcn1D3YXG0 5634 aa4.17□□□□□ -1.74
Trim39-203ENSMUST00000113706 Gm11554B1AQB2 190 aa4.17□□□□□ -1.74
Trim39-203ENSMUST00000113706 Gm40460A0A1B0GR10 244 aa4.12□□□□□ -1.75
Trim39-203ENSMUST00000113706 Gm7579A0A1B0GRJ4 243 aa4.12□□□□□ -1.75
Trim39-203ENSMUST00000113706 Krtap5-5Q2TA51 241 aa4.12□□□□□ -1.75
Trim39-203ENSMUST00000113706 Krtap5-4Q62220 223 aa4.12□□□□□ -1.75
Trim39-203ENSMUST00000113706 Kmt2dQ6PDK2 5588 aa4.03□□□□□ -1.76
Trim39-203ENSMUST00000113706 Gm10024A0A0A0MQA4 119 aa3.94□□□□□ -1.78
Trim39-203ENSMUST00000113706 A030005L19RikA0A1Y7VIU2 113 aa3.9□□□□□ -1.79
Trim39-203ENSMUST00000113706 Gm39115A0A1B0GSH7 232 aa3.84□□□□□ -1.79
Trim39-203ENSMUST00000113706 Krtap28-10A0A1Y7VP58 119 aa3.74□□□□□ -1.81
Trim39-203ENSMUST00000113706 DstQ91ZU6 7393 aaKnown RBP3.72□□□□□ -1.81
Trim39-203ENSMUST00000113706 Eppk1Q8R0W0 6548 aa3.71□□□□□ -1.81
Trim39-203ENSMUST00000113706 Muc19Q6PZE0 7524 aa3.68□□□□□ -1.82
Trim39-203ENSMUST00000113706 Gm11639A0A1D5RLM8 5808 aa3.62□□□□□ -1.83
Trim39-203ENSMUST00000113706 Gm7544A0A1Y7VJ58 118 aa3.58□□□□□ -1.84
Trim39-203ENSMUST00000113706 1110025L11RikO09048 78 aa3.56□□□□□ -1.84
Trim39-203ENSMUST00000113706 Krtap6-5Q925H3 78 aa3.56□□□□□ -1.84
Trim39-203ENSMUST00000113706 AhnakE9Q616 5656 aaKnown RBP3.46□□□□□ -1.85
Trim39-203ENSMUST00000113706 A030005K14RikA0A1Y7VNY1 122 aa3.45□□□□□ -1.86
Trim39-203ENSMUST00000113706 Krtap28-13A0A087WQP5 138 aa3.42□□□□□ -1.86
Trim39-203ENSMUST00000113706 A0A1Y7VJ07 166 aa3.38□□□□□ -1.87
Trim39-203ENSMUST00000113706 Gm45618A0A1B0GSA0 219 aa3.35□□□□□ -1.87
Trim39-203ENSMUST00000113706 NebE9Q1W3 7152 aa3.33□□□□□ -1.88
Trim39-203ENSMUST00000113706 Gpr98Q8VHN7 6298 aaKnown RBP3.22□□□□□ -1.89
Trim39-203ENSMUST00000113706 Gm10229O08631 77 aa3.15□□□□□ -1.9
Trim39-203ENSMUST00000113706 A030003K21RikA0A1Y7VIM3 128 aa3.15□□□□□ -1.91
Trim39-203ENSMUST00000113706 Gm6217A0A1Y7VJK9 128 aa3.15□□□□□ -1.91
Trim39-203ENSMUST00000113706 Gm11567Q9D141 195 aa3.1□□□□□ -1.91
Trim39-203ENSMUST00000113706 Gm29735A0A1B0GT06 219 aa3.1□□□□□ -1.91
Trim39-203ENSMUST00000113706 Sprr2bO70554 98 aa3.1□□□□□ -1.91
Trim39-203ENSMUST00000113706 A0A286YCP9 139 aa2.97□□□□□ -1.93
Trim39-203ENSMUST00000113706 Krtap21-1Q925H4 128 aa2.92□□□□□ -1.94
Trim39-203ENSMUST00000113706 Phgr1Q8K0G7 91 aa2.76□□□□□ -1.97
Trim39-203ENSMUST00000113706 Krtap6-2O08884 159 aa2.7□□□□□ -1.98
Trim39-203ENSMUST00000113706 A030014E15RikA0A1Y7VJV2 120 aa2.69□□□□□ -1.98
Trim39-203ENSMUST00000113706 Krtap5-1Q64507 230 aa1.98□□□□□ -2.09
Trim39-203ENSMUST00000113706 Gm4559A4IF42 199 aa1.78□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 175.6 ms