RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Gm11564A2A4L9 201 aa4.95□□□□□ -1.62
Vcan-201ENSMUST00000109543 Gm11595B1AQA7 289 aa4.95□□□□□ -1.62
Vcan-201ENSMUST00000109543 Krtap4-8B1AQA8 209 aa4.95□□□□□ -1.62
Vcan-201ENSMUST00000109543 Lce3bQ9CQM7 98 aa4.94□□□□□ -1.62
Vcan-201ENSMUST00000109543 Mt4P47945 62 aa4.93□□□□□ -1.62
Vcan-201ENSMUST00000109543 Syne2Q6ZWQ0 6874 aaKnown RBP4.91□□□□□ -1.62
Vcan-201ENSMUST00000109543 Gm38119A0A0A6YX29 146 aa4.9□□□□□ -1.62
Vcan-201ENSMUST00000109543 Lce1fB9EJP6 147 aa4.89□□□□□ -1.63
Vcan-201ENSMUST00000109543 Lce1a1Q9CQH5 143 aa4.89□□□□□ -1.63
Vcan-201ENSMUST00000109543 Gm10100J3QK64 120 aa4.88□□□□□ -1.63
Vcan-201ENSMUST00000109543 Krtap4-9B1AQA9 244 aa4.84□□□□□ -1.63
Vcan-201ENSMUST00000109543 Lce1bQ9D149 137 aa4.83□□□□□ -1.64
Vcan-201ENSMUST00000109543 Fsip2A2ARZ3 6995 aa4.8□□□□□ -1.64
Vcan-201ENSMUST00000109543 Gm7544A0A1Y7VJ58 118 aa4.79□□□□□ -1.64
Vcan-201ENSMUST00000109543 Gm10142J3KMP7 120 aa4.77□□□□□ -1.65
Vcan-201ENSMUST00000109543 A0A1Y7VJ07 166 aa4.75□□□□□ -1.65
Vcan-201ENSMUST00000109543 Lce3cQ91V05 98 aa4.73□□□□□ -1.65
Vcan-201ENSMUST00000109543 Lce3eF8VQJ0 98 aa4.7□□□□□ -1.66
Vcan-201ENSMUST00000109543 Lce3fQ6PAI4 98 aa4.7□□□□□ -1.66
Vcan-201ENSMUST00000109543 2300003K06RikA2A4M0 262 aa4.68□□□□□ -1.66
Vcan-201ENSMUST00000109543 Krtap4-13Q9D7P3 165 aa4.68□□□□□ -1.66
Vcan-201ENSMUST00000109543 Lce3dE9Q8V1 98 aa4.63□□□□□ -1.67
Vcan-201ENSMUST00000109543 Sprr2kO70562 68 aa4.62□□□□□ -1.67
Vcan-201ENSMUST00000109543 A030014E15RikA0A1Y7VJV2 120 aa4.6□□□□□ -1.67
Vcan-201ENSMUST00000109543 Sprr2hO70559 108 aa4.6□□□□□ -1.67
Vcan-201ENSMUST00000109543 ObscnA2AAJ9 8891 aaKnown RBP4.56□□□□□ -1.68
Vcan-201ENSMUST00000109543 Lce1kJ3QP15 125 aa4.55□□□□□ -1.68
Vcan-201ENSMUST00000109543 Lce1lQ9D1G7 135 aa4.52□□□□□ -1.69
Vcan-201ENSMUST00000109543 Sprr2iO70560 76 aa4.51□□□□□ -1.69
Vcan-201ENSMUST00000109543 Mt1P02802 61 aaKnown RBP4.51□□□□□ -1.69
Vcan-201ENSMUST00000109543 Lce3aQ497I5 98 aa4.5□□□□□ -1.69
Vcan-201ENSMUST00000109543 Krtap31-1Q9D644 177 aa4.46□□□□□ -1.69
Vcan-201ENSMUST00000109543 Sprr2eO70556 76 aa4.42□□□□□ -1.7
Vcan-201ENSMUST00000109543 Gm11568A2A4M2 211 aa4.36□□□□□ -1.71
Vcan-201ENSMUST00000109543 Krtap9-1Q64526 186 aa4.36□□□□□ -1.71
Vcan-201ENSMUST00000109543 Krtap20-2E9Q0A8 60 aa4.32□□□□□ -1.72
Vcan-201ENSMUST00000109543 Krtap5-2Q9D5Z7 189 aa4.25□□□□□ -1.73
Vcan-201ENSMUST00000109543 Krtap6-3A0A087WQL6 57 aa4.23□□□□□ -1.73
Vcan-201ENSMUST00000109543 Sprr2fO70557 76 aa4.23□□□□□ -1.73
Vcan-201ENSMUST00000109543 A030003K21RikA0A1Y7VIM3 128 aa4.22□□□□□ -1.73
Vcan-201ENSMUST00000109543 Krtap31-2Q8CAY5 177 aa4.18□□□□□ -1.74
Vcan-201ENSMUST00000109543 Gm10153A0A1B0GRL1 320 aa4.09□□□□□ -1.75
Vcan-201ENSMUST00000109543 Gm6217A0A1Y7VJK9 128 aa4.01□□□□□ -1.77
Vcan-201ENSMUST00000109543 Krtap4-16Q91W93 202 aa4□□□□□ -1.77
Vcan-201ENSMUST00000109543 Mt3P28184 68 aa4□□□□□ -1.77
Vcan-201ENSMUST00000109543 Macf1Q9QXZ0 7354 aaKnown RBP4□□□□□ -1.77
Vcan-201ENSMUST00000109543 Gm10024A0A0A0MQA4 119 aa3.94□□□□□ -1.78
Vcan-201ENSMUST00000109543 Gm4553A0A1B0GSA9 284 aa3.89□□□□□ -1.79
Vcan-201ENSMUST00000109543 Hmcn1D3YXG0 5634 aa3.88□□□□□ -1.79
Vcan-201ENSMUST00000109543 Gm45337A0A1B0GS71 263 aa3.87□□□□□ -1.79
Vcan-201ENSMUST00000109543 Gm11559Q9D3H7 191 aa3.87□□□□□ -1.79
Vcan-201ENSMUST00000109543 A0A286YCP9 139 aa3.84□□□□□ -1.79
Vcan-201ENSMUST00000109543 Kmt2dQ6PDK2 5588 aa3.81□□□□□ -1.8
Vcan-201ENSMUST00000109543 Gm11554B1AQB2 190 aa3.79□□□□□ -1.8
Vcan-201ENSMUST00000109543 Gm2431E9Q8S1 172 aa3.79□□□□□ -1.8
Vcan-201ENSMUST00000109543 Gm40460A0A1B0GR10 244 aa3.76□□□□□ -1.81
Vcan-201ENSMUST00000109543 Gm7579A0A1B0GRJ4 243 aa3.76□□□□□ -1.81
Vcan-201ENSMUST00000109543 Krtap5-5Q2TA51 241 aa3.76□□□□□ -1.81
Vcan-201ENSMUST00000109543 Krtap5-4Q62220 223 aa3.76□□□□□ -1.81
Vcan-201ENSMUST00000109543 Muc16A0A140LJ72 8478 aa3.62□□□□□ -1.83
Vcan-201ENSMUST00000109543 Eppk1Q8R0W0 6548 aa3.48□□□□□ -1.85
Vcan-201ENSMUST00000109543 Gm39115A0A1B0GSH7 232 aa3.44□□□□□ -1.86
Vcan-201ENSMUST00000109543 1110025L11RikO09048 78 aa3.44□□□□□ -1.86
Vcan-201ENSMUST00000109543 Krtap6-5Q925H3 78 aa3.44□□□□□ -1.86
Vcan-201ENSMUST00000109543 Muc19Q6PZE0 7524 aa3.38□□□□□ -1.87
Vcan-201ENSMUST00000109543 DstQ91ZU6 7393 aaKnown RBP3.37□□□□□ -1.87
Vcan-201ENSMUST00000109543 Gm11639A0A1D5RLM8 5808 aa3.32□□□□□ -1.88
Vcan-201ENSMUST00000109543 AhnakE9Q616 5656 aaKnown RBP3.22□□□□□ -1.89
Vcan-201ENSMUST00000109543 Gm45618A0A1B0GSA0 219 aa3.19□□□□□ -1.9
Vcan-201ENSMUST00000109543 Sprr2bO70554 98 aa3.09□□□□□ -1.92
Vcan-201ENSMUST00000109543 Gm10229O08631 77 aa3.05□□□□□ -1.92
Vcan-201ENSMUST00000109543 Gpr98Q8VHN7 6298 aaKnown RBP2.96□□□□□ -1.94
Vcan-201ENSMUST00000109543 NebE9Q1W3 7152 aa2.96□□□□□ -1.94
Vcan-201ENSMUST00000109543 Gm29735A0A1B0GT06 219 aa2.93□□□□□ -1.94
Vcan-201ENSMUST00000109543 Gm11567Q9D141 195 aa2.92□□□□□ -1.94
Vcan-201ENSMUST00000109543 Krtap21-1Q925H4 128 aa2.82□□□□□ -1.96
Vcan-201ENSMUST00000109543 Phgr1Q8K0G7 91 aa2.72□□□□□ -1.97
Vcan-201ENSMUST00000109543 Krtap6-2O08884 159 aa2.57□□□□□ -2
Vcan-201ENSMUST00000109543 Krtap5-1Q64507 230 aa2.07□□□□□ -2.08
Vcan-201ENSMUST00000109543 Gm4559A4IF42 199 aa2.05□□□□□ -2.08
Retrieved 80 of 22,080 RNA–protein pairs in 159 ms