RNA–Protein interactions for RNA: ENSMUST00000108362.7

Sptbn4-202, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-202ENSMUST00000108362 Krtap4-2B1AQ85 167 aa4.93□□□□□ -1.62
Sptbn4-202ENSMUST00000108362 Krtap31-1Q9D644 177 aa4.9□□□□□ -1.63
Sptbn4-202ENSMUST00000108362 Krtap4-6Q3V4B7 195 aa4.89□□□□□ -1.63
Sptbn4-202ENSMUST00000108362 Mt4P47945 62 aa4.87□□□□□ -1.63
Sptbn4-202ENSMUST00000108362 Muc5bE9Q5I3 4800 aa4.82□□□□□ -1.64
Sptbn4-202ENSMUST00000108362 Sprr2hO70559 108 aa4.81□□□□□ -1.64
Sptbn4-202ENSMUST00000108362 ObscnA2AAJ9 8891 aaKnown RBP4.81□□□□□ -1.64
Sptbn4-202ENSMUST00000108362 Gm11938Q9D3H4 131 aa4.79□□□□□ -1.64
Sptbn4-202ENSMUST00000108362 Sprr2dO70555 85 aa4.78□□□□□ -1.64
Sptbn4-202ENSMUST00000108362 SspoQ8CG65 4998 aa4.75□□□□□ -1.65
Sptbn4-202ENSMUST00000108362 Krtap4-1Q3UUY3 169 aa4.71□□□□□ -1.66
Sptbn4-202ENSMUST00000108362 Fsip2A2ARZ3 6995 aa4.67□□□□□ -1.66
Sptbn4-202ENSMUST00000108362 Krtap4-16Q91W93 202 aa4.62□□□□□ -1.67
Sptbn4-202ENSMUST00000108362 Gm11562A0PK51 136 aa4.6□□□□□ -1.67
Sptbn4-202ENSMUST00000108362 Gm11596B1AQB0 205 aa4.58□□□□□ -1.68
Sptbn4-202ENSMUST00000108362 Gm11564A2A4L9 201 aa4.58□□□□□ -1.68
Sptbn4-202ENSMUST00000108362 Gm11563B1AQ90 168 aa4.58□□□□□ -1.68
Sptbn4-202ENSMUST00000108362 Gm11595B1AQA7 289 aa4.58□□□□□ -1.68
Sptbn4-202ENSMUST00000108362 Krtap4-8B1AQA8 209 aa4.58□□□□□ -1.68
Sptbn4-202ENSMUST00000108362 Krtap4-9B1AQA9 244 aa4.56□□□□□ -1.68
Sptbn4-202ENSMUST00000108362 2300003K06RikA2A4M0 262 aa4.51□□□□□ -1.69
Sptbn4-202ENSMUST00000108362 Lce1kJ3QP15 125 aa4.46□□□□□ -1.7
Sptbn4-202ENSMUST00000108362 Krtap4-7Q9D732 168 aa4.45□□□□□ -1.7
Sptbn4-202ENSMUST00000108362 Syne2Q6ZWQ0 6874 aaKnown RBP4.44□□□□□ -1.7
Sptbn4-202ENSMUST00000108362 Krtap4-13Q9D7P3 165 aa4.43□□□□□ -1.7
Sptbn4-202ENSMUST00000108362 Macf1Q9QXZ0 7354 aaKnown RBP4.41□□□□□ -1.7
Sptbn4-202ENSMUST00000108362 Mt3P28184 68 aa4.29□□□□□ -1.72
Sptbn4-202ENSMUST00000108362 Lce1a1Q9CQH5 143 aa4.23□□□□□ -1.73
Sptbn4-202ENSMUST00000108362 DstQ91ZU6 7393 aaKnown RBP4.15□□□□□ -1.75
Sptbn4-202ENSMUST00000108362 Krtap6-3A0A087WQL6 57 aa4.06□□□□□ -1.76
Sptbn4-202ENSMUST00000108362 Mt1P02802 61 aaKnown RBP4.06□□□□□ -1.76
Sptbn4-202ENSMUST00000108362 Gm11555B1AQ89 175 aa3.98□□□□□ -1.77
Sptbn4-202ENSMUST00000108362 Gm11554B1AQB2 190 aa3.98□□□□□ -1.77
Sptbn4-202ENSMUST00000108362 Muc19Q6PZE0 7524 aa3.96□□□□□ -1.77
Sptbn4-202ENSMUST00000108362 Krtap31-2Q8CAY5 177 aa3.96□□□□□ -1.78
Sptbn4-202ENSMUST00000108362 Krtap20-2E9Q0A8 60 aa3.94□□□□□ -1.78
Sptbn4-202ENSMUST00000108362 Sprr2bO70554 98 aa3.94□□□□□ -1.78
Sptbn4-202ENSMUST00000108362 NebE9Q1W3 7152 aa3.93□□□□□ -1.78
Sptbn4-202ENSMUST00000108362 Kmt2dQ6PDK2 5588 aa3.85□□□□□ -1.79
Sptbn4-202ENSMUST00000108362 Eppk1Q8R0W0 6548 aa3.81□□□□□ -1.8
Sptbn4-202ENSMUST00000108362 Gm11568A2A4M2 211 aa3.4□□□□□ -1.87
Sptbn4-202ENSMUST00000108362 Krtap9-1Q64526 186 aa3.4□□□□□ -1.87
Sptbn4-202ENSMUST00000108362 1110025L11RikO09048 78 aa3.34□□□□□ -1.88
Sptbn4-202ENSMUST00000108362 Krtap6-5Q925H3 78 aa3.34□□□□□ -1.88
Sptbn4-202ENSMUST00000108362 Gpr98Q8VHN7 6298 aaKnown RBP3.3□□□□□ -1.88
Sptbn4-202ENSMUST00000108362 Gm11559Q9D3H7 191 aa3.23□□□□□ -1.89
Sptbn4-202ENSMUST00000108362 Gm11639A0A1D5RLM8 5808 aa3.18□□□□□ -1.9
Sptbn4-202ENSMUST00000108362 Krtap5-2Q9D5Z7 189 aa3.16□□□□□ -1.9
Sptbn4-202ENSMUST00000108362 Gm10229O08631 77 aa3.15□□□□□ -1.91
Sptbn4-202ENSMUST00000108362 Phgr1Q8K0G7 91 aa3.12□□□□□ -1.91
Sptbn4-202ENSMUST00000108362 Hmcn1D3YXG0 5634 aa3.07□□□□□ -1.92
Sptbn4-202ENSMUST00000108362 A0A1Y7VJH8 109 aa3.05□□□□□ -1.92
Sptbn4-202ENSMUST00000108362 Gm10153A0A1B0GRL1 320 aa2.95□□□□□ -1.94
Sptbn4-202ENSMUST00000108362 Gm4553A0A1B0GSA9 284 aa2.94□□□□□ -1.94
Sptbn4-202ENSMUST00000108362 Gm2431E9Q8S1 172 aa2.85□□□□□ -1.95
Sptbn4-202ENSMUST00000108362 Gm45337A0A1B0GS71 263 aa2.77□□□□□ -1.97
Sptbn4-202ENSMUST00000108362 Gm40460A0A1B0GR10 244 aa2.68□□□□□ -1.98
Sptbn4-202ENSMUST00000108362 Gm7579A0A1B0GRJ4 243 aa2.68□□□□□ -1.98
Sptbn4-202ENSMUST00000108362 Krtap5-5Q2TA51 241 aa2.68□□□□□ -1.98
Sptbn4-202ENSMUST00000108362 Krtap5-4Q62220 223 aa2.68□□□□□ -1.98
Sptbn4-202ENSMUST00000108362 A0A1Y7VLE6 161 aa2.68□□□□□ -1.98
Sptbn4-202ENSMUST00000108362 AhnakE9Q616 5656 aaKnown RBP2.68□□□□□ -1.98
Sptbn4-202ENSMUST00000108362 A030005L19RikA0A1Y7VIU2 113 aa2.65□□□□□ -1.98
Sptbn4-202ENSMUST00000108362 Krtap6-2O08884 159 aa2.53□□□□□ -2
Sptbn4-202ENSMUST00000108362 Gm39115A0A1B0GSH7 232 aa2.48□□□□□ -2.01
Sptbn4-202ENSMUST00000108362 Gm11567Q9D141 195 aa2.44□□□□□ -2.02
Sptbn4-202ENSMUST00000108362 Krtap21-1Q925H4 128 aa2.43□□□□□ -2.02
Sptbn4-202ENSMUST00000108362 Gm45618A0A1B0GSA0 219 aa2.12□□□□□ -2.07
Sptbn4-202ENSMUST00000108362 Gm29735A0A1B0GT06 219 aa2.01□□□□□ -2.09
Sptbn4-202ENSMUST00000108362 A0A1Y7VJ07 166 aa1.95□□□□□ -2.1
Sptbn4-202ENSMUST00000108362 A0A286YCP9 139 aa1.69□□□□□ -2.14
Sptbn4-202ENSMUST00000108362 Krtap5-1Q64507 230 aa1.42□□□□□ -2.18
Sptbn4-202ENSMUST00000108362 A030003K21RikA0A1Y7VIM3 128 aa1.18□□□□□ -2.22
Sptbn4-202ENSMUST00000108362 Gm4559A4IF42 199 aa1.14□□□□□ -2.23
Sptbn4-202ENSMUST00000108362 A030005K14RikA0A1Y7VNY1 122 aa0.97□□□□□ -2.25
Sptbn4-202ENSMUST00000108362 A030014E15RikA0A1Y7VJV2 120 aa0.94□□□□□ -2.26
Sptbn4-202ENSMUST00000108362 Gm6217A0A1Y7VJK9 128 aa0.93□□□□□ -2.26
Sptbn4-202ENSMUST00000108362 Krtap28-10A0A1Y7VP58 119 aa0.9□□□□□ -2.26
Sptbn4-202ENSMUST00000108362 Gm7544A0A1Y7VJ58 118 aa0.87□□□□□ -2.27
Sptbn4-202ENSMUST00000108362 Krtap28-13A0A087WQP5 138 aa0.87□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 15.7 ms