RNA–Protein interactions for RNA: ENSMUST00000105994.3

Snrnp40-201, Transcript of U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp40, Length 1,584 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40-201ENSMUST00000105994 2310046K23RikA0A0A6YVW6 87 aa7.48□□□□□ -1.21
Snrnp40-201ENSMUST00000105994 Gm10272F7CZ33 110 aa7.35□□□□□ -1.23
Snrnp40-201ENSMUST00000105994 Krtap5-2Q9D5Z7 189 aa7.32□□□□□ -1.24
Snrnp40-201ENSMUST00000105994 Sprr2iO70560 76 aa7.25□□□□□ -1.25
Snrnp40-201ENSMUST00000105994 Syne1Q6ZWR6 8799 aa7.25□□□□□ -1.25
Snrnp40-201ENSMUST00000105994 Lce1kJ3QP15 125 aa7.25□□□□□ -1.25
Snrnp40-201ENSMUST00000105994 Gm11559Q9D3H7 191 aa7.16□□□□□ -1.26
Snrnp40-201ENSMUST00000105994 Eppk1Q8R0W0 6548 aa7.12□□□□□ -1.27
Snrnp40-201ENSMUST00000105994 Lce3bQ9CQM7 98 aa7.1□□□□□ -1.27
Snrnp40-201ENSMUST00000105994 Macf1Q9QXZ0 7354 aaKnown RBP7.05□□□□□ -1.28
Snrnp40-201ENSMUST00000105994 Gm11568A2A4M2 211 aa7.03□□□□□ -1.28
Snrnp40-201ENSMUST00000105994 Krtap9-1Q64526 186 aa7.03□□□□□ -1.28
Snrnp40-201ENSMUST00000105994 Gm11938Q9D3H4 131 aa7.03□□□□□ -1.28
Snrnp40-201ENSMUST00000105994 A030005L19RikA0A1Y7VIU2 113 aa7.02□□□□□ -1.29
Snrnp40-201ENSMUST00000105994 Gm11554B1AQB2 190 aa6.99□□□□□ -1.29
Snrnp40-201ENSMUST00000105994 Gm4553A0A1B0GSA9 284 aa6.98□□□□□ -1.29
Snrnp40-201ENSMUST00000105994 Gm20538F6Z9R1 75 aa6.92□□□□□ -1.3
Snrnp40-201ENSMUST00000105994 Kmt2dQ6PDK2 5588 aa6.9□□□□□ -1.3
Snrnp40-201ENSMUST00000105994 Lce1fB9EJP6 147 aa6.8□□□□□ -1.32
Snrnp40-201ENSMUST00000105994 Lce1cQ9D1C5 147 aa6.8□□□□□ -1.32
Snrnp40-201ENSMUST00000105994 Gm2431E9Q8S1 172 aa6.77□□□□□ -1.33
Snrnp40-201ENSMUST00000105994 Gm11639A0A1D5RLM8 5808 aa6.73□□□□□ -1.33
Snrnp40-201ENSMUST00000105994 Sprr2dO70555 85 aa6.71□□□□□ -1.34
Snrnp40-201ENSMUST00000105994 Gm45337A0A1B0GS71 263 aa6.7□□□□□ -1.34
Snrnp40-201ENSMUST00000105994 Ndufaf8A2AMZ4 74 aa6.69□□□□□ -1.34
Snrnp40-201ENSMUST00000105994 Muc19Q6PZE0 7524 aa6.6□□□□□ -1.35
Snrnp40-201ENSMUST00000105994 Krtap19-4Q925H7 84 aa6.57□□□□□ -1.36
Snrnp40-201ENSMUST00000105994 Gm10153A0A1B0GRL1 320 aa6.57□□□□□ -1.36
Snrnp40-201ENSMUST00000105994 Mt1P02802 61 aaKnown RBP6.56□□□□□ -1.36
Snrnp40-201ENSMUST00000105994 Hmcn1D3YXG0 5634 aa6.55□□□□□ -1.36
Snrnp40-201ENSMUST00000105994 Lce3cQ91V05 98 aa6.54□□□□□ -1.36
Snrnp40-201ENSMUST00000105994 Krtap28-10A0A1Y7VP58 119 aa6.52□□□□□ -1.36
Snrnp40-201ENSMUST00000105994 A0A1Y7VLE6 161 aa6.49□□□□□ -1.37
Snrnp40-201ENSMUST00000105994 Lce3dE9Q8V1 98 aa6.46□□□□□ -1.38
Snrnp40-201ENSMUST00000105994 Krtap28-13A0A087WQP5 138 aa6.45□□□□□ -1.38
Snrnp40-201ENSMUST00000105994 Gm40460A0A1B0GR10 244 aa6.45□□□□□ -1.38
Snrnp40-201ENSMUST00000105994 Gm7579A0A1B0GRJ4 243 aa6.45□□□□□ -1.38
Snrnp40-201ENSMUST00000105994 Krtap5-5Q2TA51 241 aa6.45□□□□□ -1.38
Snrnp40-201ENSMUST00000105994 Krtap5-4Q62220 223 aa6.45□□□□□ -1.38
Snrnp40-201ENSMUST00000105994 A030005K14RikA0A1Y7VNY1 122 aa6.38□□□□□ -1.39
Snrnp40-201ENSMUST00000105994 Lce3eF8VQJ0 98 aa6.37□□□□□ -1.39
Snrnp40-201ENSMUST00000105994 Lce3fQ6PAI4 98 aa6.37□□□□□ -1.39
Snrnp40-201ENSMUST00000105994 Gpr98Q8VHN7 6298 aaKnown RBP6.34□□□□□ -1.39
Snrnp40-201ENSMUST00000105994 Gm39115A0A1B0GSH7 232 aa6.34□□□□□ -1.39
Snrnp40-201ENSMUST00000105994 4933428G20RikQ9D3X4 101 aa6.34□□□□□ -1.39
Snrnp40-201ENSMUST00000105994 DstQ91ZU6 7393 aaKnown RBP6.31□□□□□ -1.4
Snrnp40-201ENSMUST00000105994 ObscnA2AAJ9 8891 aaKnown RBP6.21□□□□□ -1.41
Snrnp40-201ENSMUST00000105994 Gm10100J3QK64 120 aa6.12□□□□□ -1.43
Snrnp40-201ENSMUST00000105994 Lce3aQ497I5 98 aa6.1□□□□□ -1.43
Snrnp40-201ENSMUST00000105994 NebE9Q1W3 7152 aa6.06□□□□□ -1.44
Snrnp40-201ENSMUST00000105994 Mt3P28184 68 aa6.05□□□□□ -1.44
Snrnp40-201ENSMUST00000105994 Krtap4-16Q91W93 202 aa5.95□□□□□ -1.46
Snrnp40-201ENSMUST00000105994 Gm10142J3KMP7 120 aa5.93□□□□□ -1.46
Snrnp40-201ENSMUST00000105994 Gm45618A0A1B0GSA0 219 aa5.89□□□□□ -1.47
Snrnp40-201ENSMUST00000105994 Sprr2fO70557 76 aa5.89□□□□□ -1.47
Snrnp40-201ENSMUST00000105994 A0A1Y7VJ07 166 aa5.84□□□□□ -1.47
Snrnp40-201ENSMUST00000105994 AhnakE9Q616 5656 aaKnown RBP5.83□□□□□ -1.48
Snrnp40-201ENSMUST00000105994 Sprr2hO70559 108 aa5.79□□□□□ -1.48
Snrnp40-201ENSMUST00000105994 Gm7544A0A1Y7VJ58 118 aa5.76□□□□□ -1.49
Snrnp40-201ENSMUST00000105994 A030014E15RikA0A1Y7VJV2 120 aa5.74□□□□□ -1.49
Snrnp40-201ENSMUST00000105994 Gm9112A2AI92 75 aa5.64□□□□□ -1.51
Snrnp40-201ENSMUST00000105994 Sprr2eO70556 76 aa5.35□□□□□ -1.55
Snrnp40-201ENSMUST00000105994 Gm10024A0A0A0MQA4 119 aa5.23□□□□□ -1.57
Snrnp40-201ENSMUST00000105994 A030003K21RikA0A1Y7VIM3 128 aa4.96□□□□□ -1.62
Snrnp40-201ENSMUST00000105994 Krtap31-1Q9D644 177 aa4.94□□□□□ -1.62
Snrnp40-201ENSMUST00000105994 Muc16A0A140LJ72 8478 aa4.87□□□□□ -1.63
Snrnp40-201ENSMUST00000105994 1110025L11RikO09048 78 aa4.86□□□□□ -1.63
Snrnp40-201ENSMUST00000105994 Krtap6-5Q925H3 78 aa4.86□□□□□ -1.63
Snrnp40-201ENSMUST00000105994 Krtap31-2Q8CAY5 177 aa4.77□□□□□ -1.65
Snrnp40-201ENSMUST00000105994 Gm29735A0A1B0GT06 219 aa4.75□□□□□ -1.65
Snrnp40-201ENSMUST00000105994 Gm6217A0A1Y7VJK9 128 aa4.74□□□□□ -1.65
Snrnp40-201ENSMUST00000105994 A0A286YCP9 139 aa4.61□□□□□ -1.67
Snrnp40-201ENSMUST00000105994 Gm11567Q9D141 195 aa4.49□□□□□ -1.69
Snrnp40-201ENSMUST00000105994 Gm10229O08631 77 aa4.33□□□□□ -1.72
Snrnp40-201ENSMUST00000105994 Sprr2bO70554 98 aa4.13□□□□□ -1.75
Snrnp40-201ENSMUST00000105994 Krtap21-1Q925H4 128 aa3.95□□□□□ -1.78
Snrnp40-201ENSMUST00000105994 Krtap6-2O08884 159 aa3.76□□□□□ -1.81
Snrnp40-201ENSMUST00000105994 Krtap5-1Q64507 230 aa3.63□□□□□ -1.83
Snrnp40-201ENSMUST00000105994 Phgr1Q8K0G7 91 aa3.45□□□□□ -1.86
Snrnp40-201ENSMUST00000105994 Gm4559A4IF42 199 aa2.76□□□□□ -1.97
Retrieved 80 of 22,080 RNA–protein pairs in 16.6 ms