RNA–Protein interactions for RNA: ENSMUST00000095899.4

Syne1-202, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-202ENSMUST00000095899 Krtap4-9B1AQA9 244 aa2.82□□□□□ -1.96
Syne1-202ENSMUST00000095899 Gm7544A0A1Y7VJ58 118 aa2.81□□□□□ -1.96
Syne1-202ENSMUST00000095899 Fsip2A2ARZ3 6995 aa2.81□□□□□ -1.96
Syne1-202ENSMUST00000095899 Sprr2dO70555 85 aa2.81□□□□□ -1.96
Syne1-202ENSMUST00000095899 Gm11938Q9D3H4 131 aa2.8□□□□□ -1.96
Syne1-202ENSMUST00000095899 Mt4P47945 62 aa2.79□□□□□ -1.96
Syne1-202ENSMUST00000095899 Lce1bQ9D149 137 aa2.78□□□□□ -1.96
Syne1-202ENSMUST00000095899 Gm10272F7CZ33 110 aa2.77□□□□□ -1.97
Syne1-202ENSMUST00000095899 A0A1Y7VJ07 166 aa2.75□□□□□ -1.97
Syne1-202ENSMUST00000095899 Lce1cQ9D1C5 147 aa2.73□□□□□ -1.97
Syne1-202ENSMUST00000095899 Krtap4-13Q9D7P3 165 aa2.71□□□□□ -1.97
Syne1-202ENSMUST00000095899 Krtap6-3A0A087WQL6 57 aa2.7□□□□□ -1.98
Syne1-202ENSMUST00000095899 Gm38119A0A0A6YX29 146 aa2.68□□□□□ -1.98
Syne1-202ENSMUST00000095899 Syne1Q6ZWR6 8799 aa2.66□□□□□ -1.98
Syne1-202ENSMUST00000095899 Sprr2kO70562 68 aa2.65□□□□□ -1.98
Syne1-202ENSMUST00000095899 Sprr2iO70560 76 aa2.65□□□□□ -1.99
Syne1-202ENSMUST00000095899 2300003K06RikA2A4M0 262 aa2.64□□□□□ -1.99
Syne1-202ENSMUST00000095899 Lce1fB9EJP6 147 aa2.62□□□□□ -1.99
Syne1-202ENSMUST00000095899 Lce1a1Q9CQH5 143 aa2.62□□□□□ -1.99
Syne1-202ENSMUST00000095899 Krtap19-4Q925H7 84 aa2.58□□□□□ -2
Syne1-202ENSMUST00000095899 Lce1lQ9D1G7 135 aa2.58□□□□□ -2
Syne1-202ENSMUST00000095899 Gm10100J3QK64 120 aa2.52□□□□□ -2.01
Syne1-202ENSMUST00000095899 A0A286YCP9 139 aa2.52□□□□□ -2.01
Syne1-202ENSMUST00000095899 A030003K21RikA0A1Y7VIM3 128 aa2.51□□□□□ -2.01
Syne1-202ENSMUST00000095899 Sprr2fO70557 76 aa2.5□□□□□ -2.01
Syne1-202ENSMUST00000095899 Lce3bQ9CQM7 98 aa2.5□□□□□ -2.01
Syne1-202ENSMUST00000095899 Krtap20-2E9Q0A8 60 aa2.49□□□□□ -2.01
Syne1-202ENSMUST00000095899 Gm10142J3KMP7 120 aa2.49□□□□□ -2.01
Syne1-202ENSMUST00000095899 A030014E15RikA0A1Y7VJV2 120 aa2.48□□□□□ -2.01
Syne1-202ENSMUST00000095899 Krtap5-2Q9D5Z7 189 aa2.47□□□□□ -2.01
Syne1-202ENSMUST00000095899 Sprr2eO70556 76 aa2.46□□□□□ -2.01
Syne1-202ENSMUST00000095899 Sprr2hO70559 108 aa2.45□□□□□ -2.02
Syne1-202ENSMUST00000095899 Gm6217A0A1Y7VJK9 128 aa2.42□□□□□ -2.02
Syne1-202ENSMUST00000095899 ObscnA2AAJ9 8891 aaKnown RBP2.42□□□□□ -2.02
Syne1-202ENSMUST00000095899 Lce1kJ3QP15 125 aa2.4□□□□□ -2.03
Syne1-202ENSMUST00000095899 Gm11568A2A4M2 211 aa2.39□□□□□ -2.03
Syne1-202ENSMUST00000095899 Krtap9-1Q64526 186 aa2.39□□□□□ -2.03
Syne1-202ENSMUST00000095899 Lce3dE9Q8V1 98 aa2.39□□□□□ -2.03
Syne1-202ENSMUST00000095899 Lce3cQ91V05 98 aa2.39□□□□□ -2.03
Syne1-202ENSMUST00000095899 Mt1P02802 61 aaKnown RBP2.37□□□□□ -2.03
Syne1-202ENSMUST00000095899 Gm4553A0A1B0GSA9 284 aa2.35□□□□□ -2.03
Syne1-202ENSMUST00000095899 Lce3eF8VQJ0 98 aa2.35□□□□□ -2.03
Syne1-202ENSMUST00000095899 Lce3fQ6PAI4 98 aa2.35□□□□□ -2.03
Syne1-202ENSMUST00000095899 Macf1Q9QXZ0 7354 aaKnown RBP2.32□□□□□ -2.04
Syne1-202ENSMUST00000095899 Gm45337A0A1B0GS71 263 aa2.32□□□□□ -2.04
Syne1-202ENSMUST00000095899 Gm11559Q9D3H7 191 aa2.32□□□□□ -2.04
Syne1-202ENSMUST00000095899 Lce3aQ497I5 98 aa2.31□□□□□ -2.04
Syne1-202ENSMUST00000095899 Muc16A0A140LJ72 8478 aa2.3□□□□□ -2.04
Syne1-202ENSMUST00000095899 Gm10153A0A1B0GRL1 320 aa2.28□□□□□ -2.04
Syne1-202ENSMUST00000095899 Gm40460A0A1B0GR10 244 aa2.27□□□□□ -2.05
Syne1-202ENSMUST00000095899 Gm7579A0A1B0GRJ4 243 aa2.27□□□□□ -2.05
Syne1-202ENSMUST00000095899 Krtap5-5Q2TA51 241 aa2.27□□□□□ -2.05
Syne1-202ENSMUST00000095899 Krtap5-4Q62220 223 aa2.27□□□□□ -2.05
Syne1-202ENSMUST00000095899 Gm10024A0A0A0MQA4 119 aa2.27□□□□□ -2.05
Syne1-202ENSMUST00000095899 Krtap4-16Q91W93 202 aa2.25□□□□□ -2.05
Syne1-202ENSMUST00000095899 Gm2431E9Q8S1 172 aa2.23□□□□□ -2.05
Syne1-202ENSMUST00000095899 Gm11554B1AQB2 190 aa2.21□□□□□ -2.06
Syne1-202ENSMUST00000095899 Gm39115A0A1B0GSH7 232 aa2.21□□□□□ -2.06
Syne1-202ENSMUST00000095899 Eppk1Q8R0W0 6548 aa2.17□□□□□ -2.06
Syne1-202ENSMUST00000095899 Kmt2dQ6PDK2 5588 aa2.13□□□□□ -2.07
Syne1-202ENSMUST00000095899 Hmcn1D3YXG0 5634 aa2.13□□□□□ -2.07
Syne1-202ENSMUST00000095899 Gm45618A0A1B0GSA0 219 aa2.09□□□□□ -2.08
Syne1-202ENSMUST00000095899 Mt3P28184 68 aa2.08□□□□□ -2.08
Syne1-202ENSMUST00000095899 Muc19Q6PZE0 7524 aa2.01□□□□□ -2.09
Syne1-202ENSMUST00000095899 DstQ91ZU6 7393 aaKnown RBP2.01□□□□□ -2.09
Syne1-202ENSMUST00000095899 Gm11639A0A1D5RLM8 5808 aa2□□□□□ -2.09
Syne1-202ENSMUST00000095899 Gpr98Q8VHN7 6298 aaKnown RBP2□□□□□ -2.09
Syne1-202ENSMUST00000095899 NebE9Q1W3 7152 aa1.89□□□□□ -2.11
Syne1-202ENSMUST00000095899 AhnakE9Q616 5656 aaKnown RBP1.85□□□□□ -2.11
Syne1-202ENSMUST00000095899 1110025L11RikO09048 78 aa1.79□□□□□ -2.12
Syne1-202ENSMUST00000095899 Krtap6-5Q925H3 78 aa1.79□□□□□ -2.12
Syne1-202ENSMUST00000095899 Gm29735A0A1B0GT06 219 aa1.7□□□□□ -2.14
Syne1-202ENSMUST00000095899 Sprr2bO70554 98 aa1.6□□□□□ -2.15
Syne1-202ENSMUST00000095899 Gm11567Q9D141 195 aa1.58□□□□□ -2.16
Syne1-202ENSMUST00000095899 Gm10229O08631 77 aa1.56□□□□□ -2.16
Syne1-202ENSMUST00000095899 Krtap21-1Q925H4 128 aa1.5□□□□□ -2.17
Syne1-202ENSMUST00000095899 Phgr1Q8K0G7 91 aa1.44□□□□□ -2.18
Syne1-202ENSMUST00000095899 Krtap6-2O08884 159 aa1.33□□□□□ -2.2
Syne1-202ENSMUST00000095899 Krtap5-1Q64507 230 aa1.22□□□□□ -2.21
Syne1-202ENSMUST00000095899 Gm4559A4IF42 199 aa1.18□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 96.7 ms