RNA–Protein interactions for RNA: ENSMUST00000089915.9

Casc4-203, Transcript of Protein CASC4, mousemouse

TSL 2 BASIC

Gene Casc4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-203ENSMUST00000089915 Krtap4-1Q3UUY3 169 aa4.44□□□□□ -1.7
Casc4-203ENSMUST00000089915 Gm7544A0A1Y7VJ58 118 aa4.43□□□□□ -1.7
Casc4-203ENSMUST00000089915 Fsip2A2ARZ3 6995 aa4.42□□□□□ -1.7
Casc4-203ENSMUST00000089915 Gm10142J3KMP7 120 aa4.4□□□□□ -1.7
Casc4-203ENSMUST00000089915 Gm11555B1AQ89 175 aa4.39□□□□□ -1.71
Casc4-203ENSMUST00000089915 Lce3cQ91V05 98 aa4.32□□□□□ -1.72
Casc4-203ENSMUST00000089915 Gm38119A0A0A6YX29 146 aa4.3□□□□□ -1.72
Casc4-203ENSMUST00000089915 ObscnA2AAJ9 8891 aaKnown RBP4.3□□□□□ -1.72
Casc4-203ENSMUST00000089915 Mt4P47945 62 aa4.3□□□□□ -1.72
Casc4-203ENSMUST00000089915 Lce3dE9Q8V1 98 aa4.29□□□□□ -1.72
Casc4-203ENSMUST00000089915 Sprr2hO70559 108 aa4.27□□□□□ -1.73
Casc4-203ENSMUST00000089915 Lce1gQ9D195 139 aa4.27□□□□□ -1.73
Casc4-203ENSMUST00000089915 Gm11564A2A4L9 201 aa4.25□□□□□ -1.73
Casc4-203ENSMUST00000089915 Gm11563B1AQ90 168 aa4.25□□□□□ -1.73
Casc4-203ENSMUST00000089915 Gm11595B1AQA7 289 aa4.25□□□□□ -1.73
Casc4-203ENSMUST00000089915 Krtap4-8B1AQA8 209 aa4.25□□□□□ -1.73
Casc4-203ENSMUST00000089915 Syne2Q6ZWQ0 6874 aaKnown RBP4.25□□□□□ -1.73
Casc4-203ENSMUST00000089915 Lce3eF8VQJ0 98 aa4.24□□□□□ -1.73
Casc4-203ENSMUST00000089915 Lce3fQ6PAI4 98 aa4.24□□□□□ -1.73
Casc4-203ENSMUST00000089915 Gm11596B1AQB0 205 aa4.23□□□□□ -1.73
Casc4-203ENSMUST00000089915 Krtap4-2B1AQ85 167 aa4.21□□□□□ -1.74
Casc4-203ENSMUST00000089915 Krtap4-9B1AQA9 244 aa4.19□□□□□ -1.74
Casc4-203ENSMUST00000089915 Sprr2iO70560 76 aa4.19□□□□□ -1.74
Casc4-203ENSMUST00000089915 Lce1bQ9D149 137 aa4.16□□□□□ -1.74
Casc4-203ENSMUST00000089915 2300003K06RikA2A4M0 262 aa4.16□□□□□ -1.74
Casc4-203ENSMUST00000089915 Lce3aQ497I5 98 aa4.1□□□□□ -1.75
Casc4-203ENSMUST00000089915 Sprr2eO70556 76 aa4.09□□□□□ -1.75
Casc4-203ENSMUST00000089915 Krtap4-7Q9D732 168 aa4.07□□□□□ -1.76
Casc4-203ENSMUST00000089915 Krtap4-13Q9D7P3 165 aa4.07□□□□□ -1.76
Casc4-203ENSMUST00000089915 A0A1Y7VJ07 166 aa4.07□□□□□ -1.76
Casc4-203ENSMUST00000089915 Krtap4-16Q91W93 202 aa4.04□□□□□ -1.76
Casc4-203ENSMUST00000089915 Lce1kJ3QP15 125 aa4.03□□□□□ -1.76
Casc4-203ENSMUST00000089915 Mt1P02802 61 aaKnown RBP4.02□□□□□ -1.77
Casc4-203ENSMUST00000089915 Lce1lQ9D1G7 135 aa3.98□□□□□ -1.77
Casc4-203ENSMUST00000089915 Sprr2fO70557 76 aa3.97□□□□□ -1.77
Casc4-203ENSMUST00000089915 A030003K21RikA0A1Y7VIM3 128 aa3.93□□□□□ -1.78
Casc4-203ENSMUST00000089915 Sprr2kO70562 68 aa3.9□□□□□ -1.78
Casc4-203ENSMUST00000089915 Gm11568A2A4M2 211 aa3.88□□□□□ -1.79
Casc4-203ENSMUST00000089915 Krtap9-1Q64526 186 aa3.88□□□□□ -1.79
Casc4-203ENSMUST00000089915 A030014E15RikA0A1Y7VJV2 120 aa3.88□□□□□ -1.79
Casc4-203ENSMUST00000089915 Gm6217A0A1Y7VJK9 128 aa3.83□□□□□ -1.8
Casc4-203ENSMUST00000089915 Macf1Q9QXZ0 7354 aaKnown RBP3.81□□□□□ -1.8
Casc4-203ENSMUST00000089915 Krtap20-2E9Q0A8 60 aa3.79□□□□□ -1.8
Casc4-203ENSMUST00000089915 Krtap5-2Q9D5Z7 189 aa3.67□□□□□ -1.82
Casc4-203ENSMUST00000089915 Gm10153A0A1B0GRL1 320 aa3.62□□□□□ -1.83
Casc4-203ENSMUST00000089915 Kmt2dQ6PDK2 5588 aa3.61□□□□□ -1.83
Casc4-203ENSMUST00000089915 Muc19Q6PZE0 7524 aa3.6□□□□□ -1.83
Casc4-203ENSMUST00000089915 A0A286YCP9 139 aa3.59□□□□□ -1.83
Casc4-203ENSMUST00000089915 Gm10024A0A0A0MQA4 119 aa3.56□□□□□ -1.84
Casc4-203ENSMUST00000089915 Hmcn1D3YXG0 5634 aa3.53□□□□□ -1.84
Casc4-203ENSMUST00000089915 Krtap6-3A0A087WQL6 57 aa3.47□□□□□ -1.85
Casc4-203ENSMUST00000089915 Mt3P28184 68 aa3.46□□□□□ -1.86
Casc4-203ENSMUST00000089915 Gm45337A0A1B0GS71 263 aa3.32□□□□□ -1.88
Casc4-203ENSMUST00000089915 Gm4553A0A1B0GSA9 284 aa3.31□□□□□ -1.88
Casc4-203ENSMUST00000089915 Gm11554B1AQB2 190 aa3.29□□□□□ -1.88
Casc4-203ENSMUST00000089915 Gm11559Q9D3H7 191 aa3.29□□□□□ -1.88
Casc4-203ENSMUST00000089915 Gm2431E9Q8S1 172 aa3.28□□□□□ -1.88
Casc4-203ENSMUST00000089915 DstQ91ZU6 7393 aaKnown RBP3.27□□□□□ -1.89
Casc4-203ENSMUST00000089915 Gm40460A0A1B0GR10 244 aa3.21□□□□□ -1.9
Casc4-203ENSMUST00000089915 Gm7579A0A1B0GRJ4 243 aa3.21□□□□□ -1.9
Casc4-203ENSMUST00000089915 Krtap5-5Q2TA51 241 aa3.21□□□□□ -1.9
Casc4-203ENSMUST00000089915 Krtap5-4Q62220 223 aa3.21□□□□□ -1.9
Casc4-203ENSMUST00000089915 1110025L11RikO09048 78 aa3.06□□□□□ -1.92
Casc4-203ENSMUST00000089915 Krtap6-5Q925H3 78 aa3.06□□□□□ -1.92
Casc4-203ENSMUST00000089915 Gm11639A0A1D5RLM8 5808 aa2.98□□□□□ -1.93
Casc4-203ENSMUST00000089915 NebE9Q1W3 7152 aa2.92□□□□□ -1.94
Casc4-203ENSMUST00000089915 Gm39115A0A1B0GSH7 232 aa2.9□□□□□ -1.95
Casc4-203ENSMUST00000089915 Eppk1Q8R0W0 6548 aa2.88□□□□□ -1.95
Casc4-203ENSMUST00000089915 AhnakE9Q616 5656 aaKnown RBP2.84□□□□□ -1.95
Casc4-203ENSMUST00000089915 Gm10229O08631 77 aa2.7□□□□□ -1.98
Casc4-203ENSMUST00000089915 Sprr2bO70554 98 aa2.67□□□□□ -1.98
Casc4-203ENSMUST00000089915 Gm11567Q9D141 195 aa2.64□□□□□ -1.99
Casc4-203ENSMUST00000089915 Gpr98Q8VHN7 6298 aaKnown RBP2.6□□□□□ -1.99
Casc4-203ENSMUST00000089915 Gm45618A0A1B0GSA0 219 aa2.58□□□□□ -2
Casc4-203ENSMUST00000089915 Krtap21-1Q925H4 128 aa2.54□□□□□ -2
Casc4-203ENSMUST00000089915 Phgr1Q8K0G7 91 aa2.52□□□□□ -2.01
Casc4-203ENSMUST00000089915 Gm29735A0A1B0GT06 219 aa2.43□□□□□ -2.02
Casc4-203ENSMUST00000089915 Krtap6-2O08884 159 aa2.27□□□□□ -2.05
Casc4-203ENSMUST00000089915 Krtap5-1Q64507 230 aa1.79□□□□□ -2.12
Casc4-203ENSMUST00000089915 Gm4559A4IF42 199 aa1.66□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 13.2 ms