RNA–Protein interactions for RNA: ENSMUST00000081339.12

Rrp1b-201, Transcript of Ribosomal RNA processing protein 1 homolog B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rrp1b, Length 4,874 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1b-201ENSMUST00000081339 Lce1cQ9D1C5 147 aa4.72□□□□□ -1.65
Rrp1b-201ENSMUST00000081339 Lce1lQ9D1G7 135 aa4.72□□□□□ -1.65
Rrp1b-201ENSMUST00000081339 Lce1dQ9D731 133 aa4.72□□□□□ -1.65
Rrp1b-201ENSMUST00000081339 Krtap4-9B1AQA9 244 aa4.69□□□□□ -1.66
Rrp1b-201ENSMUST00000081339 Lce3aQ497I5 98 aa4.69□□□□□ -1.66
Rrp1b-201ENSMUST00000081339 Lce1hQ9D6R3 140 aa4.67□□□□□ -1.66
Rrp1b-201ENSMUST00000081339 Krtap19-4Q925H7 84 aa4.64□□□□□ -1.67
Rrp1b-201ENSMUST00000081339 Syne2Q6ZWQ0 6874 aaKnown RBP4.63□□□□□ -1.67
Rrp1b-201ENSMUST00000081339 SspoQ8CG65 4998 aa4.58□□□□□ -1.68
Rrp1b-201ENSMUST00000081339 2300003K06RikA2A4M0 262 aa4.57□□□□□ -1.68
Rrp1b-201ENSMUST00000081339 Krtap4-13Q9D7P3 165 aa4.56□□□□□ -1.68
Rrp1b-201ENSMUST00000081339 Lce1eQ9D139 143 aa4.55□□□□□ -1.68
Rrp1b-201ENSMUST00000081339 Krtap4-7Q9D732 168 aa4.5□□□□□ -1.69
Rrp1b-201ENSMUST00000081339 Sprr2dO70555 85 aa4.46□□□□□ -1.7
Rrp1b-201ENSMUST00000081339 Gm10024A0A0A0MQA4 119 aa4.4□□□□□ -1.7
Rrp1b-201ENSMUST00000081339 Sprr2fO70557 76 aa4.4□□□□□ -1.7
Rrp1b-201ENSMUST00000081339 Gm11938Q9D3H4 131 aa4.4□□□□□ -1.71
Rrp1b-201ENSMUST00000081339 Gm11562A0PK51 136 aa4.36□□□□□ -1.71
Rrp1b-201ENSMUST00000081339 Sprr2eO70556 76 aa4.35□□□□□ -1.71
Rrp1b-201ENSMUST00000081339 Lce1kJ3QP15 125 aa4.32□□□□□ -1.72
Rrp1b-201ENSMUST00000081339 Muc16A0A140LJ72 8478 aa4.25□□□□□ -1.73
Rrp1b-201ENSMUST00000081339 Sprr2hO70559 108 aa4.25□□□□□ -1.73
Rrp1b-201ENSMUST00000081339 Macf1Q9QXZ0 7354 aaKnown RBP4.22□□□□□ -1.73
Rrp1b-201ENSMUST00000081339 Krtap31-1Q9D644 177 aa4.2□□□□□ -1.74
Rrp1b-201ENSMUST00000081339 Krtap6-3A0A087WQL6 57 aa4.17□□□□□ -1.74
Rrp1b-201ENSMUST00000081339 Lce1a1Q9CQH5 143 aa4.16□□□□□ -1.74
Rrp1b-201ENSMUST00000081339 Gm11555B1AQ89 175 aa4.11□□□□□ -1.75
Rrp1b-201ENSMUST00000081339 Krtap20-2E9Q0A8 60 aa3.99□□□□□ -1.77
Rrp1b-201ENSMUST00000081339 Gm11554B1AQB2 190 aa3.99□□□□□ -1.77
Rrp1b-201ENSMUST00000081339 Mt3P28184 68 aa3.92□□□□□ -1.78
Rrp1b-201ENSMUST00000081339 Krtap4-16Q91W93 202 aa3.9□□□□□ -1.79
Rrp1b-201ENSMUST00000081339 ObscnA2AAJ9 8891 aaKnown RBP3.88□□□□□ -1.79
Rrp1b-201ENSMUST00000081339 Mt1P02802 61 aaKnown RBP3.8□□□□□ -1.8
Rrp1b-201ENSMUST00000081339 DstQ91ZU6 7393 aaKnown RBP3.77□□□□□ -1.81
Rrp1b-201ENSMUST00000081339 Krtap31-2Q8CAY5 177 aa3.73□□□□□ -1.81
Rrp1b-201ENSMUST00000081339 NebE9Q1W3 7152 aa3.73□□□□□ -1.81
Rrp1b-201ENSMUST00000081339 Muc19Q6PZE0 7524 aa3.6□□□□□ -1.83
Rrp1b-201ENSMUST00000081339 Eppk1Q8R0W0 6548 aa3.59□□□□□ -1.84
Rrp1b-201ENSMUST00000081339 Kmt2dQ6PDK2 5588 aa3.54□□□□□ -1.84
Rrp1b-201ENSMUST00000081339 Gm11568A2A4M2 211 aa3.36□□□□□ -1.87
Rrp1b-201ENSMUST00000081339 Krtap9-1Q64526 186 aa3.36□□□□□ -1.87
Rrp1b-201ENSMUST00000081339 Gm11559Q9D3H7 191 aa3.33□□□□□ -1.88
Rrp1b-201ENSMUST00000081339 Sprr2bO70554 98 aa3.29□□□□□ -1.88
Rrp1b-201ENSMUST00000081339 Gm11639A0A1D5RLM8 5808 aa3.25□□□□□ -1.89
Rrp1b-201ENSMUST00000081339 Gpr98Q8VHN7 6298 aaKnown RBP3.24□□□□□ -1.89
Rrp1b-201ENSMUST00000081339 Krtap5-2Q9D5Z7 189 aa3.13□□□□□ -1.91
Rrp1b-201ENSMUST00000081339 Hmcn1D3YXG0 5634 aa3.08□□□□□ -1.92
Rrp1b-201ENSMUST00000081339 1110025L11RikO09048 78 aa3.03□□□□□ -1.92
Rrp1b-201ENSMUST00000081339 Krtap6-5Q925H3 78 aa3.03□□□□□ -1.92
Rrp1b-201ENSMUST00000081339 Gm4553A0A1B0GSA9 284 aa2.96□□□□□ -1.94
Rrp1b-201ENSMUST00000081339 Gm2431E9Q8S1 172 aa2.84□□□□□ -1.96
Rrp1b-201ENSMUST00000081339 Gm10229O08631 77 aa2.81□□□□□ -1.96
Rrp1b-201ENSMUST00000081339 A030005L19RikA0A1Y7VIU2 113 aa2.76□□□□□ -1.97
Rrp1b-201ENSMUST00000081339 Gm10153A0A1B0GRL1 320 aa2.74□□□□□ -1.97
Rrp1b-201ENSMUST00000081339 A0A1Y7VJH8 109 aa2.73□□□□□ -1.97
Rrp1b-201ENSMUST00000081339 AhnakE9Q616 5656 aaKnown RBP2.7□□□□□ -1.98
Rrp1b-201ENSMUST00000081339 Gm45337A0A1B0GS71 263 aa2.65□□□□□ -1.98
Rrp1b-201ENSMUST00000081339 Phgr1Q8K0G7 91 aa2.64□□□□□ -1.99
Rrp1b-201ENSMUST00000081339 Gm40460A0A1B0GR10 244 aa2.58□□□□□ -2
Rrp1b-201ENSMUST00000081339 Gm7579A0A1B0GRJ4 243 aa2.58□□□□□ -2
Rrp1b-201ENSMUST00000081339 Krtap5-5Q2TA51 241 aa2.58□□□□□ -2
Rrp1b-201ENSMUST00000081339 Krtap5-4Q62220 223 aa2.58□□□□□ -2
Rrp1b-201ENSMUST00000081339 Gm39115A0A1B0GSH7 232 aa2.44□□□□□ -2.02
Rrp1b-201ENSMUST00000081339 Krtap6-2O08884 159 aa2.35□□□□□ -2.03
Rrp1b-201ENSMUST00000081339 Krtap21-1Q925H4 128 aa2.23□□□□□ -2.05
Rrp1b-201ENSMUST00000081339 Gm11567Q9D141 195 aa2.16□□□□□ -2.06
Rrp1b-201ENSMUST00000081339 A0A1Y7VLE6 161 aa2.14□□□□□ -2.07
Rrp1b-201ENSMUST00000081339 Gm45618A0A1B0GSA0 219 aa2.13□□□□□ -2.07
Rrp1b-201ENSMUST00000081339 Gm29735A0A1B0GT06 219 aa1.91□□□□□ -2.1
Rrp1b-201ENSMUST00000081339 Krtap28-10A0A1Y7VP58 119 aa1.75□□□□□ -2.13
Rrp1b-201ENSMUST00000081339 A030005K14RikA0A1Y7VNY1 122 aa1.71□□□□□ -2.14
Rrp1b-201ENSMUST00000081339 Krtap28-13A0A087WQP5 138 aa1.69□□□□□ -2.14
Rrp1b-201ENSMUST00000081339 Gm7544A0A1Y7VJ58 118 aa1.59□□□□□ -2.15
Rrp1b-201ENSMUST00000081339 A030003K21RikA0A1Y7VIM3 128 aa1.55□□□□□ -2.16
Rrp1b-201ENSMUST00000081339 A0A1Y7VJ07 166 aa1.54□□□□□ -2.16
Rrp1b-201ENSMUST00000081339 Krtap5-1Q64507 230 aa1.53□□□□□ -2.16
Rrp1b-201ENSMUST00000081339 A030014E15RikA0A1Y7VJV2 120 aa1.49□□□□□ -2.17
Rrp1b-201ENSMUST00000081339 Gm6217A0A1Y7VJK9 128 aa1.48□□□□□ -2.17
Rrp1b-201ENSMUST00000081339 A0A286YCP9 139 aa1.34□□□□□ -2.19
Rrp1b-201ENSMUST00000081339 Gm4559A4IF42 199 aa1.03□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 67 ms