RNA–Protein interactions for RNA: ENSMUST00000078752.9

Casc4-201, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 4,215 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-201ENSMUST00000078752 Sprr2fO70557 76 aa4.7□□□□□ -1.66
Casc4-201ENSMUST00000078752 ObscnA2AAJ9 8891 aaKnown RBP4.7□□□□□ -1.66
Casc4-201ENSMUST00000078752 Krtap19-4Q925H7 84 aa4.69□□□□□ -1.66
Casc4-201ENSMUST00000078752 Syne2Q6ZWQ0 6874 aaKnown RBP4.67□□□□□ -1.66
Casc4-201ENSMUST00000078752 Mt4P47945 62 aa4.67□□□□□ -1.66
Casc4-201ENSMUST00000078752 Lce1bQ9D149 137 aa4.65□□□□□ -1.66
Casc4-201ENSMUST00000078752 Krtap31-2Q8CAY5 177 aa4.63□□□□□ -1.67
Casc4-201ENSMUST00000078752 Lce1fB9EJP6 147 aa4.61□□□□□ -1.67
Casc4-201ENSMUST00000078752 Lce1lQ9D1G7 135 aa4.61□□□□□ -1.67
Casc4-201ENSMUST00000078752 Lce1a1Q9CQH5 143 aa4.56□□□□□ -1.68
Casc4-201ENSMUST00000078752 Krtap4-2B1AQ85 167 aa4.54□□□□□ -1.68
Casc4-201ENSMUST00000078752 SspoQ8CG65 4998 aa4.52□□□□□ -1.69
Casc4-201ENSMUST00000078752 Gm10024A0A0A0MQA4 119 aa4.51□□□□□ -1.69
Casc4-201ENSMUST00000078752 Muc5bE9Q5I3 4800 aa4.5□□□□□ -1.69
Casc4-201ENSMUST00000078752 Krtap4-1Q3UUY3 169 aa4.48□□□□□ -1.69
Casc4-201ENSMUST00000078752 Sprr2hO70559 108 aa4.46□□□□□ -1.7
Casc4-201ENSMUST00000078752 Krtap4-9B1AQA9 244 aa4.39□□□□□ -1.71
Casc4-201ENSMUST00000078752 Gm11562A0PK51 136 aa4.38□□□□□ -1.71
Casc4-201ENSMUST00000078752 Sprr2eO70556 76 aa4.35□□□□□ -1.71
Casc4-201ENSMUST00000078752 Gm11564A2A4L9 201 aa4.34□□□□□ -1.72
Casc4-201ENSMUST00000078752 Gm11563B1AQ90 168 aa4.34□□□□□ -1.72
Casc4-201ENSMUST00000078752 Gm11595B1AQA7 289 aa4.34□□□□□ -1.72
Casc4-201ENSMUST00000078752 Krtap4-8B1AQA8 209 aa4.34□□□□□ -1.72
Casc4-201ENSMUST00000078752 2300003K06RikA2A4M0 262 aa4.31□□□□□ -1.72
Casc4-201ENSMUST00000078752 Gm11596B1AQB0 205 aa4.31□□□□□ -1.72
Casc4-201ENSMUST00000078752 Krtap4-13Q9D7P3 165 aa4.3□□□□□ -1.72
Casc4-201ENSMUST00000078752 Muc19Q6PZE0 7524 aa4.23□□□□□ -1.73
Casc4-201ENSMUST00000078752 Krtap4-7Q9D732 168 aa4.21□□□□□ -1.74
Casc4-201ENSMUST00000078752 Lce1kJ3QP15 125 aa4.2□□□□□ -1.74
Casc4-201ENSMUST00000078752 A0A1Y7VJH8 109 aa4.13□□□□□ -1.75
Casc4-201ENSMUST00000078752 Krtap28-10A0A1Y7VP58 119 aa4.06□□□□□ -1.76
Casc4-201ENSMUST00000078752 DstQ91ZU6 7393 aaKnown RBP4.06□□□□□ -1.76
Casc4-201ENSMUST00000078752 NebE9Q1W3 7152 aa3.96□□□□□ -1.78
Casc4-201ENSMUST00000078752 Krtap28-13A0A087WQP5 138 aa3.94□□□□□ -1.78
Casc4-201ENSMUST00000078752 A0A1Y7VLE6 161 aa3.94□□□□□ -1.78
Casc4-201ENSMUST00000078752 Gm11555B1AQ89 175 aa3.92□□□□□ -1.78
Casc4-201ENSMUST00000078752 Gm11554B1AQB2 190 aa3.8□□□□□ -1.8
Casc4-201ENSMUST00000078752 Krtap20-2E9Q0A8 60 aa3.79□□□□□ -1.8
Casc4-201ENSMUST00000078752 A030005L19RikA0A1Y7VIU2 113 aa3.78□□□□□ -1.8
Casc4-201ENSMUST00000078752 A030005K14RikA0A1Y7VNY1 122 aa3.77□□□□□ -1.81
Casc4-201ENSMUST00000078752 Mt3P28184 68 aa3.69□□□□□ -1.82
Casc4-201ENSMUST00000078752 Mt1P02802 61 aaKnown RBP3.67□□□□□ -1.82
Casc4-201ENSMUST00000078752 A0A1Y7VJ07 166 aa3.6□□□□□ -1.83
Casc4-201ENSMUST00000078752 Kmt2dQ6PDK2 5588 aa3.56□□□□□ -1.84
Casc4-201ENSMUST00000078752 Krtap6-3A0A087WQL6 57 aa3.54□□□□□ -1.84
Casc4-201ENSMUST00000078752 Gm7544A0A1Y7VJ58 118 aa3.53□□□□□ -1.84
Casc4-201ENSMUST00000078752 A030003K21RikA0A1Y7VIM3 128 aa3.5□□□□□ -1.85
Casc4-201ENSMUST00000078752 A030014E15RikA0A1Y7VJV2 120 aa3.41□□□□□ -1.86
Casc4-201ENSMUST00000078752 Gm6217A0A1Y7VJK9 128 aa3.27□□□□□ -1.89
Casc4-201ENSMUST00000078752 Hmcn1D3YXG0 5634 aa3.21□□□□□ -1.9
Casc4-201ENSMUST00000078752 Gm11568A2A4M2 211 aa3.19□□□□□ -1.9
Casc4-201ENSMUST00000078752 Krtap9-1Q64526 186 aa3.19□□□□□ -1.9
Casc4-201ENSMUST00000078752 Sprr2bO70554 98 aa3.15□□□□□ -1.91
Casc4-201ENSMUST00000078752 Gm11639A0A1D5RLM8 5808 aa3.1□□□□□ -1.91
Casc4-201ENSMUST00000078752 Gpr98Q8VHN7 6298 aaKnown RBP3.09□□□□□ -1.91
Casc4-201ENSMUST00000078752 Eppk1Q8R0W0 6548 aa3.06□□□□□ -1.92
Casc4-201ENSMUST00000078752 1110025L11RikO09048 78 aa2.96□□□□□ -1.94
Casc4-201ENSMUST00000078752 Krtap6-5Q925H3 78 aa2.96□□□□□ -1.94
Casc4-201ENSMUST00000078752 Phgr1Q8K0G7 91 aa2.96□□□□□ -1.94
Casc4-201ENSMUST00000078752 Gm11559Q9D3H7 191 aa2.92□□□□□ -1.94
Casc4-201ENSMUST00000078752 Krtap5-2Q9D5Z7 189 aa2.75□□□□□ -1.97
Casc4-201ENSMUST00000078752 Gm10229O08631 77 aa2.74□□□□□ -1.97
Casc4-201ENSMUST00000078752 A0A286YCP9 139 aa2.72□□□□□ -1.97
Casc4-201ENSMUST00000078752 Gm10153A0A1B0GRL1 320 aa2.61□□□□□ -1.99
Casc4-201ENSMUST00000078752 AhnakE9Q616 5656 aaKnown RBP2.58□□□□□ -2
Casc4-201ENSMUST00000078752 Gm4553A0A1B0GSA9 284 aa2.54□□□□□ -2
Casc4-201ENSMUST00000078752 Gm2431E9Q8S1 172 aa2.51□□□□□ -2.01
Casc4-201ENSMUST00000078752 Gm11567Q9D141 195 aa2.44□□□□□ -2.02
Casc4-201ENSMUST00000078752 Gm45337A0A1B0GS71 263 aa2.38□□□□□ -2.03
Casc4-201ENSMUST00000078752 Gm40460A0A1B0GR10 244 aa2.32□□□□□ -2.04
Casc4-201ENSMUST00000078752 Gm7579A0A1B0GRJ4 243 aa2.32□□□□□ -2.04
Casc4-201ENSMUST00000078752 Krtap5-5Q2TA51 241 aa2.32□□□□□ -2.04
Casc4-201ENSMUST00000078752 Krtap5-4Q62220 223 aa2.32□□□□□ -2.04
Casc4-201ENSMUST00000078752 Krtap21-1Q925H4 128 aa2.3□□□□□ -2.04
Casc4-201ENSMUST00000078752 Krtap6-2O08884 159 aa2.27□□□□□ -2.05
Casc4-201ENSMUST00000078752 Gm39115A0A1B0GSH7 232 aa2.12□□□□□ -2.07
Casc4-201ENSMUST00000078752 Gm45618A0A1B0GSA0 219 aa2□□□□□ -2.09
Casc4-201ENSMUST00000078752 Gm29735A0A1B0GT06 219 aa1.85□□□□□ -2.11
Casc4-201ENSMUST00000078752 Krtap5-1Q64507 230 aa1.35□□□□□ -2.19
Casc4-201ENSMUST00000078752 Gm4559A4IF42 199 aa1.35□□□□□ -2.19
Retrieved 80 of 22,080 RNA–protein pairs in 162.3 ms