RNA–Protein interactions for RNA: ENSMUST00000070478.3

Sdc3-201, Transcript of Syndecan-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc3, Length 4,973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3-201ENSMUST00000070478 Krtap4-1Q3UUY3 169 aa5.58□□□□□ -1.52
Sdc3-201ENSMUST00000070478 Krtap17-1A2A5X6 109 aa5.56□□□□□ -1.52
Sdc3-201ENSMUST00000070478 Hmcn2A2AJ76 5100 aa5.55□□□□□ -1.52
Sdc3-201ENSMUST00000070478 Muc5bE9Q5I3 4800 aa5.5□□□□□ -1.53
Sdc3-201ENSMUST00000070478 Gm11596B1AQB0 205 aa5.5□□□□□ -1.53
Sdc3-201ENSMUST00000070478 Gm11564A2A4L9 201 aa5.46□□□□□ -1.54
Sdc3-201ENSMUST00000070478 Gm11563B1AQ90 168 aa5.46□□□□□ -1.54
Sdc3-201ENSMUST00000070478 Gm11595B1AQA7 289 aa5.46□□□□□ -1.54
Sdc3-201ENSMUST00000070478 Krtap4-8B1AQA8 209 aa5.46□□□□□ -1.54
Sdc3-201ENSMUST00000070478 Krtap4-9B1AQA9 244 aa5.44□□□□□ -1.54
Sdc3-201ENSMUST00000070478 2300003K06RikA2A4M0 262 aa5.4□□□□□ -1.54
Sdc3-201ENSMUST00000070478 Krtap4-7Q9D732 168 aa5.34□□□□□ -1.55
Sdc3-201ENSMUST00000070478 Fsip2A2ARZ3 6995 aa5.33□□□□□ -1.56
Sdc3-201ENSMUST00000070478 Krtap4-13Q9D7P3 165 aa5.29□□□□□ -1.56
Sdc3-201ENSMUST00000070478 Gm11562A0PK51 136 aa5.26□□□□□ -1.57
Sdc3-201ENSMUST00000070478 Sprr2dO70555 85 aa5.25□□□□□ -1.57
Sdc3-201ENSMUST00000070478 Lce1kJ3QP15 125 aa5.21□□□□□ -1.58
Sdc3-201ENSMUST00000070478 Gm11938Q9D3H4 131 aa5.17□□□□□ -1.58
Sdc3-201ENSMUST00000070478 Sprr2hO70559 108 aa5.14□□□□□ -1.59
Sdc3-201ENSMUST00000070478 Syne2Q6ZWQ0 6874 aaKnown RBP5.12□□□□□ -1.59
Sdc3-201ENSMUST00000070478 SspoQ8CG65 4998 aa5.11□□□□□ -1.59
Sdc3-201ENSMUST00000070478 Krtap31-1Q9D644 177 aa5.07□□□□□ -1.6
Sdc3-201ENSMUST00000070478 Muc16A0A140LJ72 8478 aa5.06□□□□□ -1.6
Sdc3-201ENSMUST00000070478 Mt3P28184 68 aa4.97□□□□□ -1.61
Sdc3-201ENSMUST00000070478 Lce1a1Q9CQH5 143 aa4.88□□□□□ -1.63
Sdc3-201ENSMUST00000070478 Krtap6-3A0A087WQL6 57 aa4.86□□□□□ -1.63
Sdc3-201ENSMUST00000070478 Gm11554B1AQB2 190 aa4.72□□□□□ -1.65
Sdc3-201ENSMUST00000070478 Krtap4-16Q91W93 202 aa4.66□□□□□ -1.66
Sdc3-201ENSMUST00000070478 ObscnA2AAJ9 8891 aaKnown RBP4.66□□□□□ -1.66
Sdc3-201ENSMUST00000070478 Macf1Q9QXZ0 7354 aaKnown RBP4.65□□□□□ -1.66
Sdc3-201ENSMUST00000070478 Krtap20-2E9Q0A8 60 aa4.63□□□□□ -1.67
Sdc3-201ENSMUST00000070478 Mt1P02802 61 aaKnown RBP4.62□□□□□ -1.67
Sdc3-201ENSMUST00000070478 DstQ91ZU6 7393 aaKnown RBP4.37□□□□□ -1.71
Sdc3-201ENSMUST00000070478 Gm11555B1AQ89 175 aa4.37□□□□□ -1.71
Sdc3-201ENSMUST00000070478 Eppk1Q8R0W0 6548 aa4.32□□□□□ -1.72
Sdc3-201ENSMUST00000070478 Kmt2dQ6PDK2 5588 aa4.31□□□□□ -1.72
Sdc3-201ENSMUST00000070478 Sprr2bO70554 98 aa4.31□□□□□ -1.72
Sdc3-201ENSMUST00000070478 NebE9Q1W3 7152 aa4.27□□□□□ -1.73
Sdc3-201ENSMUST00000070478 Muc19Q6PZE0 7524 aa4.03□□□□□ -1.76
Sdc3-201ENSMUST00000070478 Krtap31-2Q8CAY5 177 aa3.87□□□□□ -1.79
Sdc3-201ENSMUST00000070478 1110025L11RikO09048 78 aa3.81□□□□□ -1.8
Sdc3-201ENSMUST00000070478 Krtap6-5Q925H3 78 aa3.81□□□□□ -1.8
Sdc3-201ENSMUST00000070478 Gm11559Q9D3H7 191 aa3.75□□□□□ -1.81
Sdc3-201ENSMUST00000070478 Gm11568A2A4M2 211 aa3.74□□□□□ -1.81
Sdc3-201ENSMUST00000070478 Krtap9-1Q64526 186 aa3.74□□□□□ -1.81
Sdc3-201ENSMUST00000070478 Gpr98Q8VHN7 6298 aaKnown RBP3.69□□□□□ -1.82
Sdc3-201ENSMUST00000070478 Gm11639A0A1D5RLM8 5808 aa3.68□□□□□ -1.82
Sdc3-201ENSMUST00000070478 Gm10229O08631 77 aa3.58□□□□□ -1.84
Sdc3-201ENSMUST00000070478 Hmcn1D3YXG0 5634 aa3.44□□□□□ -1.86
Sdc3-201ENSMUST00000070478 Krtap5-2Q9D5Z7 189 aa3.4□□□□□ -1.86
Sdc3-201ENSMUST00000070478 Phgr1Q8K0G7 91 aa3.26□□□□□ -1.89
Sdc3-201ENSMUST00000070478 Gm4553A0A1B0GSA9 284 aa3.21□□□□□ -1.9
Sdc3-201ENSMUST00000070478 AhnakE9Q616 5656 aaKnown RBP3.03□□□□□ -1.92
Sdc3-201ENSMUST00000070478 Gm2431E9Q8S1 172 aa3.02□□□□□ -1.93
Sdc3-201ENSMUST00000070478 Gm10153A0A1B0GRL1 320 aa3.01□□□□□ -1.93
Sdc3-201ENSMUST00000070478 A030005L19RikA0A1Y7VIU2 113 aa2.92□□□□□ -1.94
Sdc3-201ENSMUST00000070478 Krtap6-2O08884 159 aa2.92□□□□□ -1.94
Sdc3-201ENSMUST00000070478 Gm45337A0A1B0GS71 263 aa2.85□□□□□ -1.95
Sdc3-201ENSMUST00000070478 A0A1Y7VJH8 109 aa2.81□□□□□ -1.96
Sdc3-201ENSMUST00000070478 Gm40460A0A1B0GR10 244 aa2.8□□□□□ -1.96
Sdc3-201ENSMUST00000070478 Gm7579A0A1B0GRJ4 243 aa2.8□□□□□ -1.96
Sdc3-201ENSMUST00000070478 Krtap5-5Q2TA51 241 aa2.8□□□□□ -1.96
Sdc3-201ENSMUST00000070478 Krtap5-4Q62220 223 aa2.8□□□□□ -1.96
Sdc3-201ENSMUST00000070478 Krtap21-1Q925H4 128 aa2.73□□□□□ -1.97
Sdc3-201ENSMUST00000070478 Gm39115A0A1B0GSH7 232 aa2.57□□□□□ -2
Sdc3-201ENSMUST00000070478 Gm11567Q9D141 195 aa2.42□□□□□ -2.02
Sdc3-201ENSMUST00000070478 A0A1Y7VLE6 161 aa2.34□□□□□ -2.03
Sdc3-201ENSMUST00000070478 Gm45618A0A1B0GSA0 219 aa2.17□□□□□ -2.06
Sdc3-201ENSMUST00000070478 Gm29735A0A1B0GT06 219 aa2.11□□□□□ -2.07
Sdc3-201ENSMUST00000070478 Krtap5-1Q64507 230 aa1.64□□□□□ -2.15
Sdc3-201ENSMUST00000070478 A0A1Y7VJ07 166 aa1.45□□□□□ -2.18
Sdc3-201ENSMUST00000070478 A030003K21RikA0A1Y7VIM3 128 aa1.4□□□□□ -2.19
Sdc3-201ENSMUST00000070478 Gm6217A0A1Y7VJK9 128 aa1.33□□□□□ -2.2
Sdc3-201ENSMUST00000070478 A0A286YCP9 139 aa1.24□□□□□ -2.21
Sdc3-201ENSMUST00000070478 Krtap28-10A0A1Y7VP58 119 aa1.21□□□□□ -2.21
Sdc3-201ENSMUST00000070478 A030005K14RikA0A1Y7VNY1 122 aa1.19□□□□□ -2.22
Sdc3-201ENSMUST00000070478 Krtap28-13A0A087WQP5 138 aa1.15□□□□□ -2.23
Sdc3-201ENSMUST00000070478 Gm7544A0A1Y7VJ58 118 aa1.13□□□□□ -2.23
Sdc3-201ENSMUST00000070478 Gm4559A4IF42 199 aa1.1□□□□□ -2.23
Sdc3-201ENSMUST00000070478 A030014E15RikA0A1Y7VJV2 120 aa1.04□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 6.9 ms