RNA–Protein interactions for RNA: ENSMUST00000063249.8

Xrcc1-201, Transcript of DNA repair protein XRCC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Xrcc1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1-201ENSMUST00000063249 A0A1Y7VJH8 109 aa5.16□□□□□ -1.58
Xrcc1-201ENSMUST00000063249 Krtap20-2E9Q0A8 60 aa5.16□□□□□ -1.58
Xrcc1-201ENSMUST00000063249 Gm10272F7CZ33 110 aa5.11□□□□□ -1.59
Xrcc1-201ENSMUST00000063249 Krtap5-2Q9D5Z7 189 aa5.04□□□□□ -1.6
Xrcc1-201ENSMUST00000063249 Sprr2iO70560 76 aa5.03□□□□□ -1.6
Xrcc1-201ENSMUST00000063249 Lce3bQ9CQM7 98 aa5.03□□□□□ -1.6
Xrcc1-201ENSMUST00000063249 Syne1Q6ZWR6 8799 aa5.03□□□□□ -1.6
Xrcc1-201ENSMUST00000063249 2310046K23RikA0A0A6YVW6 87 aa5.01□□□□□ -1.61
Xrcc1-201ENSMUST00000063249 Lce1kJ3QP15 125 aa5.01□□□□□ -1.61
Xrcc1-201ENSMUST00000063249 Lce1eQ9D139 143 aa4.98□□□□□ -1.61
Xrcc1-201ENSMUST00000063249 Gm11568A2A4M2 211 aa4.88□□□□□ -1.63
Xrcc1-201ENSMUST00000063249 Krtap9-1Q64526 186 aa4.88□□□□□ -1.63
Xrcc1-201ENSMUST00000063249 Gm11559Q9D3H7 191 aa4.85□□□□□ -1.63
Xrcc1-201ENSMUST00000063249 Gm11938Q9D3H4 131 aa4.79□□□□□ -1.64
Xrcc1-201ENSMUST00000063249 Gm4553A0A1B0GSA9 284 aa4.77□□□□□ -1.65
Xrcc1-201ENSMUST00000063249 Lce1fB9EJP6 147 aa4.77□□□□□ -1.65
Xrcc1-201ENSMUST00000063249 Lce1cQ9D1C5 147 aa4.77□□□□□ -1.65
Xrcc1-201ENSMUST00000063249 Gm11554B1AQB2 190 aa4.7□□□□□ -1.66
Xrcc1-201ENSMUST00000063249 Krtap31-1Q9D644 177 aa4.7□□□□□ -1.66
Xrcc1-201ENSMUST00000063249 A030005L19RikA0A1Y7VIU2 113 aa4.7□□□□□ -1.66
Xrcc1-201ENSMUST00000063249 Mt1P02802 61 aaKnown RBP4.65□□□□□ -1.67
Xrcc1-201ENSMUST00000063249 Eppk1Q8R0W0 6548 aa4.64□□□□□ -1.67
Xrcc1-201ENSMUST00000063249 Macf1Q9QXZ0 7354 aaKnown RBP4.62□□□□□ -1.67
Xrcc1-201ENSMUST00000063249 Gm45337A0A1B0GS71 263 aa4.61□□□□□ -1.67
Xrcc1-201ENSMUST00000063249 Gm2431E9Q8S1 172 aa4.61□□□□□ -1.67
Xrcc1-201ENSMUST00000063249 Kmt2dQ6PDK2 5588 aa4.61□□□□□ -1.67
Xrcc1-201ENSMUST00000063249 4933428G20RikQ9D3X4 101 aa4.59□□□□□ -1.67
Xrcc1-201ENSMUST00000063249 Gm10153A0A1B0GRL1 320 aa4.58□□□□□ -1.68
Xrcc1-201ENSMUST00000063249 Lce3cQ91V05 98 aa4.57□□□□□ -1.68
Xrcc1-201ENSMUST00000063249 Lce3dE9Q8V1 98 aa4.5□□□□□ -1.69
Xrcc1-201ENSMUST00000063249 Krtap19-4Q925H7 84 aa4.5□□□□□ -1.69
Xrcc1-201ENSMUST00000063249 Gm40460A0A1B0GR10 244 aa4.46□□□□□ -1.7
Xrcc1-201ENSMUST00000063249 Gm7579A0A1B0GRJ4 243 aa4.46□□□□□ -1.7
Xrcc1-201ENSMUST00000063249 Krtap5-5Q2TA51 241 aa4.46□□□□□ -1.7
Xrcc1-201ENSMUST00000063249 Krtap5-4Q62220 223 aa4.46□□□□□ -1.7
Xrcc1-201ENSMUST00000063249 Sprr2dO70555 85 aa4.41□□□□□ -1.7
Xrcc1-201ENSMUST00000063249 Hmcn1D3YXG0 5634 aa4.4□□□□□ -1.7
Xrcc1-201ENSMUST00000063249 Lce3eF8VQJ0 98 aa4.4□□□□□ -1.7
Xrcc1-201ENSMUST00000063249 Lce3fQ6PAI4 98 aa4.4□□□□□ -1.7
Xrcc1-201ENSMUST00000063249 ObscnA2AAJ9 8891 aaKnown RBP4.35□□□□□ -1.71
Xrcc1-201ENSMUST00000063249 Krtap31-2Q8CAY5 177 aa4.35□□□□□ -1.71
Xrcc1-201ENSMUST00000063249 Gm39115A0A1B0GSH7 232 aa4.33□□□□□ -1.72
Xrcc1-201ENSMUST00000063249 Gm11639A0A1D5RLM8 5808 aa4.32□□□□□ -1.72
Xrcc1-201ENSMUST00000063249 Mt3P28184 68 aa4.26□□□□□ -1.73
Xrcc1-201ENSMUST00000063249 Muc19Q6PZE0 7524 aa4.24□□□□□ -1.73
Xrcc1-201ENSMUST00000063249 Lce3aQ497I5 98 aa4.21□□□□□ -1.73
Xrcc1-201ENSMUST00000063249 DstQ91ZU6 7393 aaKnown RBP4.12□□□□□ -1.75
Xrcc1-201ENSMUST00000063249 A0A1Y7VLE6 161 aa4.09□□□□□ -1.75
Xrcc1-201ENSMUST00000063249 Gm10100J3QK64 120 aa4.06□□□□□ -1.76
Xrcc1-201ENSMUST00000063249 Sprr2fO70557 76 aa4.06□□□□□ -1.76
Xrcc1-201ENSMUST00000063249 Gpr98Q8VHN7 6298 aaKnown RBP4.02□□□□□ -1.77
Xrcc1-201ENSMUST00000063249 Gm45618A0A1B0GSA0 219 aa3.97□□□□□ -1.77
Xrcc1-201ENSMUST00000063249 Krtap4-16Q91W93 202 aa3.96□□□□□ -1.78
Xrcc1-201ENSMUST00000063249 Sprr2eO70556 76 aa3.91□□□□□ -1.78
Xrcc1-201ENSMUST00000063249 Gm10142J3KMP7 120 aa3.9□□□□□ -1.78
Xrcc1-201ENSMUST00000063249 NebE9Q1W3 7152 aa3.9□□□□□ -1.78
Xrcc1-201ENSMUST00000063249 AhnakE9Q616 5656 aaKnown RBP3.88□□□□□ -1.79
Xrcc1-201ENSMUST00000063249 Sprr2hO70559 108 aa3.8□□□□□ -1.8
Xrcc1-201ENSMUST00000063249 Gm10024A0A0A0MQA4 119 aa3.69□□□□□ -1.82
Xrcc1-201ENSMUST00000063249 A0A1Y7VJ07 166 aa3.42□□□□□ -1.86
Xrcc1-201ENSMUST00000063249 1110025L11RikO09048 78 aa3.38□□□□□ -1.87
Xrcc1-201ENSMUST00000063249 Krtap6-5Q925H3 78 aa3.38□□□□□ -1.87
Xrcc1-201ENSMUST00000063249 Gm29735A0A1B0GT06 219 aa3.3□□□□□ -1.88
Xrcc1-201ENSMUST00000063249 Muc16A0A140LJ72 8478 aa3.25□□□□□ -1.89
Xrcc1-201ENSMUST00000063249 Gm11567Q9D141 195 aa3.14□□□□□ -1.91
Xrcc1-201ENSMUST00000063249 Gm10229O08631 77 aa3.02□□□□□ -1.93
Xrcc1-201ENSMUST00000063249 Krtap21-1Q925H4 128 aa2.74□□□□□ -1.97
Xrcc1-201ENSMUST00000063249 Sprr2bO70554 98 aa2.7□□□□□ -1.98
Xrcc1-201ENSMUST00000063249 Krtap6-2O08884 159 aa2.67□□□□□ -1.98
Xrcc1-201ENSMUST00000063249 A030003K21RikA0A1Y7VIM3 128 aa2.45□□□□□ -2.02
Xrcc1-201ENSMUST00000063249 A0A286YCP9 139 aa2.41□□□□□ -2.02
Xrcc1-201ENSMUST00000063249 Krtap5-1Q64507 230 aa2.4□□□□□ -2.02
Xrcc1-201ENSMUST00000063249 Phgr1Q8K0G7 91 aa2.28□□□□□ -2.04
Xrcc1-201ENSMUST00000063249 Krtap28-10A0A1Y7VP58 119 aa2.24□□□□□ -2.05
Xrcc1-201ENSMUST00000063249 A030014E15RikA0A1Y7VJV2 120 aa2.13□□□□□ -2.07
Xrcc1-201ENSMUST00000063249 A030005K14RikA0A1Y7VNY1 122 aa2.09□□□□□ -2.07
Xrcc1-201ENSMUST00000063249 Krtap28-13A0A087WQP5 138 aa2□□□□□ -2.09
Xrcc1-201ENSMUST00000063249 Gm4559A4IF42 199 aa1.91□□□□□ -2.1
Xrcc1-201ENSMUST00000063249 Gm6217A0A1Y7VJK9 128 aa1.82□□□□□ -2.12
Xrcc1-201ENSMUST00000063249 Gm7544A0A1Y7VJ58 118 aa1.75□□□□□ -2.13
Retrieved 80 of 22,080 RNA–protein pairs in 63.5 ms