RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Mt4P47945 62 aa4.23□□□□□ -1.73
Upk3b-201ENSMUST00000062606 Sprr2iO70560 76 aa4.21□□□□□ -1.74
Upk3b-201ENSMUST00000062606 Sprr2gO70558 76 aa4.2□□□□□ -1.74
Upk3b-201ENSMUST00000062606 Krtap4-13Q9D7P3 165 aa4.11□□□□□ -1.75
Upk3b-201ENSMUST00000062606 Sprr2dO70555 85 aa4.05□□□□□ -1.76
Upk3b-201ENSMUST00000062606 A0A1Y7VJH8 109 aa4.05□□□□□ -1.76
Upk3b-201ENSMUST00000062606 2300003K06RikA2A4M0 262 aa4.04□□□□□ -1.76
Upk3b-201ENSMUST00000062606 Fsip2A2ARZ3 6995 aa4□□□□□ -1.77
Upk3b-201ENSMUST00000062606 Sprr2fO70557 76 aa3.98□□□□□ -1.77
Upk3b-201ENSMUST00000062606 Sprr2kO70562 68 aa3.96□□□□□ -1.77
Upk3b-201ENSMUST00000062606 Krtap5-2Q9D5Z7 189 aa3.96□□□□□ -1.77
Upk3b-201ENSMUST00000062606 Krtap20-2E9Q0A8 60 aa3.92□□□□□ -1.78
Upk3b-201ENSMUST00000062606 Muc16A0A140LJ72 8478 aa3.92□□□□□ -1.78
Upk3b-201ENSMUST00000062606 Syne1Q6ZWR6 8799 aa3.88□□□□□ -1.79
Upk3b-201ENSMUST00000062606 Lce1cQ9D1C5 147 aa3.87□□□□□ -1.79
Upk3b-201ENSMUST00000062606 Lce1lQ9D1G7 135 aa3.87□□□□□ -1.79
Upk3b-201ENSMUST00000062606 Gm10100J3QK64 120 aa3.86□□□□□ -1.79
Upk3b-201ENSMUST00000062606 Krtap4-16Q91W93 202 aa3.86□□□□□ -1.79
Upk3b-201ENSMUST00000062606 Gm10142J3KMP7 120 aa3.81□□□□□ -1.8
Upk3b-201ENSMUST00000062606 Lce1a1Q9CQH5 143 aa3.79□□□□□ -1.8
Upk3b-201ENSMUST00000062606 Lce1fB9EJP6 147 aa3.77□□□□□ -1.81
Upk3b-201ENSMUST00000062606 Gm10024A0A0A0MQA4 119 aa3.76□□□□□ -1.81
Upk3b-201ENSMUST00000062606 Gm4553A0A1B0GSA9 284 aa3.74□□□□□ -1.81
Upk3b-201ENSMUST00000062606 Lce3bQ9CQM7 98 aa3.73□□□□□ -1.81
Upk3b-201ENSMUST00000062606 Gm11568A2A4M2 211 aa3.71□□□□□ -1.82
Upk3b-201ENSMUST00000062606 Krtap9-1Q64526 186 aa3.71□□□□□ -1.82
Upk3b-201ENSMUST00000062606 Sprr2eO70556 76 aa3.7□□□□□ -1.82
Upk3b-201ENSMUST00000062606 Gm45337A0A1B0GS71 263 aa3.69□□□□□ -1.82
Upk3b-201ENSMUST00000062606 Krtap19-4Q925H7 84 aa3.69□□□□□ -1.82
Upk3b-201ENSMUST00000062606 A030005L19RikA0A1Y7VIU2 113 aa3.68□□□□□ -1.82
Upk3b-201ENSMUST00000062606 Lce1kJ3QP15 125 aa3.67□□□□□ -1.82
Upk3b-201ENSMUST00000062606 Lce3dE9Q8V1 98 aa3.66□□□□□ -1.82
Upk3b-201ENSMUST00000062606 Lce3cQ91V05 98 aa3.65□□□□□ -1.83
Upk3b-201ENSMUST00000062606 Gm10153A0A1B0GRL1 320 aa3.63□□□□□ -1.83
Upk3b-201ENSMUST00000062606 Sprr2hO70559 108 aa3.6□□□□□ -1.83
Upk3b-201ENSMUST00000062606 Gm40460A0A1B0GR10 244 aa3.6□□□□□ -1.83
Upk3b-201ENSMUST00000062606 Gm7579A0A1B0GRJ4 243 aa3.6□□□□□ -1.83
Upk3b-201ENSMUST00000062606 Mt1P02802 61 aaKnown RBP3.6□□□□□ -1.83
Upk3b-201ENSMUST00000062606 Krtap5-5Q2TA51 241 aa3.6□□□□□ -1.83
Upk3b-201ENSMUST00000062606 Krtap5-4Q62220 223 aa3.6□□□□□ -1.83
Upk3b-201ENSMUST00000062606 Lce3eF8VQJ0 98 aa3.59□□□□□ -1.83
Upk3b-201ENSMUST00000062606 Lce3fQ6PAI4 98 aa3.59□□□□□ -1.83
Upk3b-201ENSMUST00000062606 Lce3aQ497I5 98 aa3.55□□□□□ -1.84
Upk3b-201ENSMUST00000062606 Gm2431E9Q8S1 172 aa3.54□□□□□ -1.84
Upk3b-201ENSMUST00000062606 Macf1Q9QXZ0 7354 aaKnown RBP3.47□□□□□ -1.85
Upk3b-201ENSMUST00000062606 ObscnA2AAJ9 8891 aaKnown RBP3.47□□□□□ -1.85
Upk3b-201ENSMUST00000062606 Gm39115A0A1B0GSH7 232 aa3.45□□□□□ -1.86
Upk3b-201ENSMUST00000062606 Kmt2dQ6PDK2 5588 aa3.38□□□□□ -1.87
Upk3b-201ENSMUST00000062606 Eppk1Q8R0W0 6548 aa3.37□□□□□ -1.87
Upk3b-201ENSMUST00000062606 Krtap28-10A0A1Y7VP58 119 aa3.36□□□□□ -1.87
Upk3b-201ENSMUST00000062606 Mt3P28184 68 aa3.3□□□□□ -1.88
Upk3b-201ENSMUST00000062606 Gm11554B1AQB2 190 aa3.29□□□□□ -1.88
Upk3b-201ENSMUST00000062606 A0A1Y7VLE6 161 aa3.27□□□□□ -1.89
Upk3b-201ENSMUST00000062606 Gm7544A0A1Y7VJ58 118 aa3.18□□□□□ -1.9
Upk3b-201ENSMUST00000062606 Gm45618A0A1B0GSA0 219 aa3.17□□□□□ -1.9
Upk3b-201ENSMUST00000062606 Hmcn1D3YXG0 5634 aa3.13□□□□□ -1.91
Upk3b-201ENSMUST00000062606 Krtap28-13A0A087WQP5 138 aa3.12□□□□□ -1.91
Upk3b-201ENSMUST00000062606 Muc19Q6PZE0 7524 aa3.11□□□□□ -1.91
Upk3b-201ENSMUST00000062606 A030005K14RikA0A1Y7VNY1 122 aa3.1□□□□□ -1.91
Upk3b-201ENSMUST00000062606 Gm11639A0A1D5RLM8 5808 aa3.04□□□□□ -1.92
Upk3b-201ENSMUST00000062606 DstQ91ZU6 7393 aaKnown RBP3.03□□□□□ -1.92
Upk3b-201ENSMUST00000062606 NebE9Q1W3 7152 aa2.9□□□□□ -1.95
Upk3b-201ENSMUST00000062606 A0A286YCP9 139 aa2.85□□□□□ -1.95
Upk3b-201ENSMUST00000062606 AhnakE9Q616 5656 aaKnown RBP2.84□□□□□ -1.95
Upk3b-201ENSMUST00000062606 A0A1Y7VJ07 166 aa2.77□□□□□ -1.97
Upk3b-201ENSMUST00000062606 Gpr98Q8VHN7 6298 aaKnown RBP2.72□□□□□ -1.97
Upk3b-201ENSMUST00000062606 Gm29735A0A1B0GT06 219 aa2.69□□□□□ -1.98
Upk3b-201ENSMUST00000062606 A030003K21RikA0A1Y7VIM3 128 aa2.68□□□□□ -1.98
Upk3b-201ENSMUST00000062606 Gm6217A0A1Y7VJK9 128 aa2.68□□□□□ -1.98
Upk3b-201ENSMUST00000062606 1110025L11RikO09048 78 aa2.64□□□□□ -1.99
Upk3b-201ENSMUST00000062606 Krtap6-5Q925H3 78 aa2.64□□□□□ -1.99
Upk3b-201ENSMUST00000062606 A030014E15RikA0A1Y7VJV2 120 aa2.47□□□□□ -2.01
Upk3b-201ENSMUST00000062606 Gm11567Q9D141 195 aa2.42□□□□□ -2.02
Upk3b-201ENSMUST00000062606 Sprr2bO70554 98 aa2.38□□□□□ -2.03
Upk3b-201ENSMUST00000062606 Gm10229O08631 77 aa2.34□□□□□ -2.03
Upk3b-201ENSMUST00000062606 Phgr1Q8K0G7 91 aa2.24□□□□□ -2.05
Upk3b-201ENSMUST00000062606 Krtap21-1Q925H4 128 aa2.17□□□□□ -2.06
Upk3b-201ENSMUST00000062606 Krtap6-2O08884 159 aa2.05□□□□□ -2.08
Upk3b-201ENSMUST00000062606 Krtap5-1Q64507 230 aa1.78□□□□□ -2.13
Upk3b-201ENSMUST00000062606 Gm4559A4IF42 199 aa1.63□□□□□ -2.15
Retrieved 80 of 22,080 RNA–protein pairs in 108.9 ms