RNA–Protein interactions for RNA: ENSMUST00000060479.13

Ush2a-201, Transcript of Usherin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush2a, Length 15,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2a-201ENSMUST00000060479 SspoQ8CG65 4998 aa1.66□□□□□ -2.14
Ush2a-201ENSMUST00000060479 Lce1bQ9D149 137 aa1.66□□□□□ -2.14
Ush2a-201ENSMUST00000060479 Lce1dQ9D731 133 aa1.66□□□□□ -2.14
Ush2a-201ENSMUST00000060479 Sprr2dO70555 85 aa1.65□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Lce1eQ9D139 143 aa1.64□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Lce1fB9EJP6 147 aa1.63□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Lce1cQ9D1C5 147 aa1.63□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Lce1lQ9D1G7 135 aa1.63□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Gm11569B1AQB1 180 aa1.62□□□□□ -2.15
Ush2a-201ENSMUST00000060479 NebE9Q1W3 7152 aa1.62□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Krtap4-2B1AQ85 167 aa1.61□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Gm11639A0A1D5RLM8 5808 aa1.6□□□□□ -2.15
Ush2a-201ENSMUST00000060479 DstQ91ZU6 7393 aaKnown RBP1.6□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Gm11562A0PK51 136 aa1.58□□□□□ -2.16
Ush2a-201ENSMUST00000060479 Sprr2hO70559 108 aa1.56□□□□□ -2.16
Ush2a-201ENSMUST00000060479 Kmt2dQ6PDK2 5588 aa1.54□□□□□ -2.16
Ush2a-201ENSMUST00000060479 Syne1Q6ZWR6 8799 aa1.52□□□□□ -2.17
Ush2a-201ENSMUST00000060479 Mt4P47945 62 aa1.52□□□□□ -2.17
Ush2a-201ENSMUST00000060479 Krtap4-6Q3V4B7 195 aa1.51□□□□□ -2.17
Ush2a-201ENSMUST00000060479 Lce1a1Q9CQH5 143 aa1.51□□□□□ -2.17
Ush2a-201ENSMUST00000060479 Krtap4-16Q91W93 202 aa1.5□□□□□ -2.17
Ush2a-201ENSMUST00000060479 Gm11596B1AQB0 205 aa1.46□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Hmcn1D3YXG0 5634 aa1.46□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Krtap4-1Q3UUY3 169 aa1.45□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Lce1kJ3QP15 125 aa1.44□□□□□ -2.18
Ush2a-201ENSMUST00000060479 2300003K06RikA2A4M0 262 aa1.43□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Mt3P28184 68 aa1.42□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Gm11564A2A4L9 201 aa1.41□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Gm11563B1AQ90 168 aa1.41□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Gm11595B1AQA7 289 aa1.41□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Krtap4-8B1AQA8 209 aa1.41□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Mt1P02802 61 aaKnown RBP1.41□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Krtap4-9B1AQA9 244 aa1.4□□□□□ -2.19
Ush2a-201ENSMUST00000060479 Sprr2bO70554 98 aa1.4□□□□□ -2.19
Ush2a-201ENSMUST00000060479 ObscnA2AAJ9 8891 aaKnown RBP1.4□□□□□ -2.19
Ush2a-201ENSMUST00000060479 Krtap4-7Q9D732 168 aa1.38□□□□□ -2.19
Ush2a-201ENSMUST00000060479 Muc19Q6PZE0 7524 aa1.36□□□□□ -2.19
Ush2a-201ENSMUST00000060479 AhnakE9Q616 5656 aaKnown RBP1.35□□□□□ -2.19
Ush2a-201ENSMUST00000060479 Krtap4-13Q9D7P3 165 aa1.35□□□□□ -2.19
Ush2a-201ENSMUST00000060479 Krtap6-3A0A087WQL6 57 aa1.32□□□□□ -2.2
Ush2a-201ENSMUST00000060479 Gm11554B1AQB2 190 aa1.24□□□□□ -2.21
Ush2a-201ENSMUST00000060479 Krtap20-2E9Q0A8 60 aa1.24□□□□□ -2.21
Ush2a-201ENSMUST00000060479 Gm11555B1AQ89 175 aa1.23□□□□□ -2.21
Ush2a-201ENSMUST00000060479 Muc16A0A140LJ72 8478 aa1.22□□□□□ -2.21
Ush2a-201ENSMUST00000060479 1110025L11RikO09048 78 aa1.08□□□□□ -2.24
Ush2a-201ENSMUST00000060479 Krtap6-5Q925H3 78 aa1.08□□□□□ -2.24
Ush2a-201ENSMUST00000060479 Gm11568A2A4M2 211 aa1.07□□□□□ -2.24
Ush2a-201ENSMUST00000060479 Krtap9-1Q64526 186 aa1.07□□□□□ -2.24
Ush2a-201ENSMUST00000060479 A0A1Y7VJH8 109 aa1.03□□□□□ -2.24
Ush2a-201ENSMUST00000060479 Gm11559Q9D3H7 191 aa1.01□□□□□ -2.25
Ush2a-201ENSMUST00000060479 Krtap5-2Q9D5Z7 189 aa0.99□□□□□ -2.25
Ush2a-201ENSMUST00000060479 Gm10229O08631 77 aa0.99□□□□□ -2.25
Ush2a-201ENSMUST00000060479 Phgr1Q8K0G7 91 aa0.98□□□□□ -2.25
Ush2a-201ENSMUST00000060479 Gm4553A0A1B0GSA9 284 aa0.92□□□□□ -2.26
Ush2a-201ENSMUST00000060479 Gm10153A0A1B0GRL1 320 aa0.91□□□□□ -2.26
Ush2a-201ENSMUST00000060479 Gm11567Q9D141 195 aa0.89□□□□□ -2.27
Ush2a-201ENSMUST00000060479 Gm2431E9Q8S1 172 aa0.87□□□□□ -2.27
Ush2a-201ENSMUST00000060479 A0A286YCP9 139 aa0.87□□□□□ -2.27
Ush2a-201ENSMUST00000060479 A0A1Y7VLE6 161 aa0.86□□□□□ -2.27
Ush2a-201ENSMUST00000060479 Gm40460A0A1B0GR10 244 aa0.85□□□□□ -2.27
Ush2a-201ENSMUST00000060479 Gm7579A0A1B0GRJ4 243 aa0.85□□□□□ -2.27
Ush2a-201ENSMUST00000060479 Krtap5-5Q2TA51 241 aa0.85□□□□□ -2.27
Ush2a-201ENSMUST00000060479 Krtap5-4Q62220 223 aa0.85□□□□□ -2.27
Ush2a-201ENSMUST00000060479 Gm45337A0A1B0GS71 263 aa0.85□□□□□ -2.27
Ush2a-201ENSMUST00000060479 A030005L19RikA0A1Y7VIU2 113 aa0.85□□□□□ -2.27
Ush2a-201ENSMUST00000060479 Krtap6-2O08884 159 aa0.84□□□□□ -2.28
Ush2a-201ENSMUST00000060479 Krtap21-1Q925H4 128 aa0.82□□□□□ -2.28
Ush2a-201ENSMUST00000060479 Gm39115A0A1B0GSH7 232 aa0.8□□□□□ -2.28
Ush2a-201ENSMUST00000060479 A0A1Y7VJ07 166 aa0.7□□□□□ -2.3
Ush2a-201ENSMUST00000060479 Gm45618A0A1B0GSA0 219 aa0.69□□□□□ -2.3
Ush2a-201ENSMUST00000060479 Gm29735A0A1B0GT06 219 aa0.69□□□□□ -2.3
Ush2a-201ENSMUST00000060479 Krtap28-13A0A087WQP5 138 aa0.66□□□□□ -2.3
Ush2a-201ENSMUST00000060479 A030003K21RikA0A1Y7VIM3 128 aa0.52□□□□□ -2.33
Ush2a-201ENSMUST00000060479 Gm6217A0A1Y7VJK9 128 aa0.48□□□□□ -2.33
Ush2a-201ENSMUST00000060479 A030014E15RikA0A1Y7VJV2 120 aa0.46□□□□□ -2.34
Ush2a-201ENSMUST00000060479 A030005K14RikA0A1Y7VNY1 122 aa0.46□□□□□ -2.34
Ush2a-201ENSMUST00000060479 Krtap5-1Q64507 230 aa0.44□□□□□ -2.34
Ush2a-201ENSMUST00000060479 Krtap28-10A0A1Y7VP58 119 aa0.41□□□□□ -2.34
Ush2a-201ENSMUST00000060479 Gm7544A0A1Y7VJ58 118 aa0.38□□□□□ -2.35
Ush2a-201ENSMUST00000060479 Gm4559A4IF42 199 aa0.34□□□□□ -2.36
Retrieved 80 of 22,080 RNA–protein pairs in 64.3 ms