RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 Lce3bQ9CQM7 98 aa5.13□□□□□ -1.59
Trim3-201ENSMUST00000057525 Krtap6-3A0A087WQL6 57 aa5.12□□□□□ -1.59
Trim3-201ENSMUST00000057525 Krtap31-1Q9D644 177 aa5.12□□□□□ -1.59
Trim3-201ENSMUST00000057525 Lce1kJ3QP15 125 aa4.99□□□□□ -1.61
Trim3-201ENSMUST00000057525 Sprr2gO70558 76 aa4.99□□□□□ -1.61
Trim3-201ENSMUST00000057525 Gm11938Q9D3H4 131 aa4.97□□□□□ -1.61
Trim3-201ENSMUST00000057525 Krtap20-2E9Q0A8 60 aa4.94□□□□□ -1.62
Trim3-201ENSMUST00000057525 Sprr2iO70560 76 aa4.92□□□□□ -1.62
Trim3-201ENSMUST00000057525 Krtap31-2Q8CAY5 177 aa4.89□□□□□ -1.63
Trim3-201ENSMUST00000057525 A0A1Y7VJH8 109 aa4.87□□□□□ -1.63
Trim3-201ENSMUST00000057525 Macf1Q9QXZ0 7354 aaKnown RBP4.86□□□□□ -1.63
Trim3-201ENSMUST00000057525 Lce1a1Q9CQH5 143 aa4.86□□□□□ -1.63
Trim3-201ENSMUST00000057525 Lce1eQ9D139 143 aa4.86□□□□□ -1.63
Trim3-201ENSMUST00000057525 Lce1cQ9D1C5 147 aa4.85□□□□□ -1.63
Trim3-201ENSMUST00000057525 Lce1fB9EJP6 147 aa4.81□□□□□ -1.64
Trim3-201ENSMUST00000057525 Lce3cQ91V05 98 aa4.78□□□□□ -1.64
Trim3-201ENSMUST00000057525 Gm11568A2A4M2 211 aa4.76□□□□□ -1.65
Trim3-201ENSMUST00000057525 Krtap9-1Q64526 186 aa4.76□□□□□ -1.65
Trim3-201ENSMUST00000057525 Sprr2dO70555 85 aa4.75□□□□□ -1.65
Trim3-201ENSMUST00000057525 Krtap5-2Q9D5Z7 189 aa4.72□□□□□ -1.65
Trim3-201ENSMUST00000057525 ObscnA2AAJ9 8891 aaKnown RBP4.69□□□□□ -1.66
Trim3-201ENSMUST00000057525 Lce3eF8VQJ0 98 aa4.66□□□□□ -1.66
Trim3-201ENSMUST00000057525 Lce3fQ6PAI4 98 aa4.66□□□□□ -1.66
Trim3-201ENSMUST00000057525 Mt1P02802 61 aaKnown RBP4.66□□□□□ -1.66
Trim3-201ENSMUST00000057525 Lce3dE9Q8V1 98 aa4.65□□□□□ -1.66
Trim3-201ENSMUST00000057525 Krtap19-4Q925H7 84 aa4.63□□□□□ -1.67
Trim3-201ENSMUST00000057525 Gm11554B1AQB2 190 aa4.54□□□□□ -1.68
Trim3-201ENSMUST00000057525 Gm10100J3QK64 120 aa4.54□□□□□ -1.68
Trim3-201ENSMUST00000057525 Gm11559Q9D3H7 191 aa4.5□□□□□ -1.69
Trim3-201ENSMUST00000057525 4933428G20RikQ9D3X4 101 aa4.5□□□□□ -1.69
Trim3-201ENSMUST00000057525 Hmcn1D3YXG0 5634 aa4.45□□□□□ -1.7
Trim3-201ENSMUST00000057525 Lce3aQ497I5 98 aa4.45□□□□□ -1.7
Trim3-201ENSMUST00000057525 Gm4553A0A1B0GSA9 284 aa4.4□□□□□ -1.71
Trim3-201ENSMUST00000057525 Kmt2dQ6PDK2 5588 aa4.39□□□□□ -1.71
Trim3-201ENSMUST00000057525 Gm10153A0A1B0GRL1 320 aa4.39□□□□□ -1.71
Trim3-201ENSMUST00000057525 Gm10142J3KMP7 120 aa4.38□□□□□ -1.71
Trim3-201ENSMUST00000057525 Gm2431E9Q8S1 172 aa4.32□□□□□ -1.72
Trim3-201ENSMUST00000057525 Gm45337A0A1B0GS71 263 aa4.28□□□□□ -1.72
Trim3-201ENSMUST00000057525 Eppk1Q8R0W0 6548 aa4.22□□□□□ -1.73
Trim3-201ENSMUST00000057525 Muc19Q6PZE0 7524 aa4.22□□□□□ -1.73
Trim3-201ENSMUST00000057525 Mt3P28184 68 aa4.19□□□□□ -1.74
Trim3-201ENSMUST00000057525 Sprr2hO70559 108 aa4.18□□□□□ -1.74
Trim3-201ENSMUST00000057525 DstQ91ZU6 7393 aaKnown RBP4.14□□□□□ -1.75
Trim3-201ENSMUST00000057525 A030005L19RikA0A1Y7VIU2 113 aa4.13□□□□□ -1.75
Trim3-201ENSMUST00000057525 Gm40460A0A1B0GR10 244 aa4.12□□□□□ -1.75
Trim3-201ENSMUST00000057525 Gm7579A0A1B0GRJ4 243 aa4.12□□□□□ -1.75
Trim3-201ENSMUST00000057525 Krtap5-5Q2TA51 241 aa4.12□□□□□ -1.75
Trim3-201ENSMUST00000057525 Krtap5-4Q62220 223 aa4.12□□□□□ -1.75
Trim3-201ENSMUST00000057525 A0A1Y7VLE6 161 aa4.07□□□□□ -1.76
Trim3-201ENSMUST00000057525 Gm11639A0A1D5RLM8 5808 aa4.05□□□□□ -1.76
Trim3-201ENSMUST00000057525 Muc16A0A140LJ72 8478 aa3.98□□□□□ -1.77
Trim3-201ENSMUST00000057525 Gm39115A0A1B0GSH7 232 aa3.93□□□□□ -1.78
Trim3-201ENSMUST00000057525 NebE9Q1W3 7152 aa3.92□□□□□ -1.78
Trim3-201ENSMUST00000057525 Sprr2eO70556 76 aa3.85□□□□□ -1.79
Trim3-201ENSMUST00000057525 Sprr2fO70557 76 aa3.75□□□□□ -1.81
Trim3-201ENSMUST00000057525 Gm10024A0A0A0MQA4 119 aa3.74□□□□□ -1.81
Trim3-201ENSMUST00000057525 Gpr98Q8VHN7 6298 aaKnown RBP3.71□□□□□ -1.82
Trim3-201ENSMUST00000057525 AhnakE9Q616 5656 aaKnown RBP3.69□□□□□ -1.82
Trim3-201ENSMUST00000057525 Gm7544A0A1Y7VJ58 118 aa3.61□□□□□ -1.83
Trim3-201ENSMUST00000057525 Krtap4-16Q91W93 202 aa3.57□□□□□ -1.84
Trim3-201ENSMUST00000057525 Gm45618A0A1B0GSA0 219 aa3.49□□□□□ -1.85
Trim3-201ENSMUST00000057525 1110025L11RikO09048 78 aa3.44□□□□□ -1.86
Trim3-201ENSMUST00000057525 Krtap6-5Q925H3 78 aa3.44□□□□□ -1.86
Trim3-201ENSMUST00000057525 Krtap28-10A0A1Y7VP58 119 aa3.43□□□□□ -1.86
Trim3-201ENSMUST00000057525 A0A1Y7VJ07 166 aa3.32□□□□□ -1.88
Trim3-201ENSMUST00000057525 A030003K21RikA0A1Y7VIM3 128 aa3.29□□□□□ -1.88
Trim3-201ENSMUST00000057525 Gm6217A0A1Y7VJK9 128 aa3.29□□□□□ -1.88
Trim3-201ENSMUST00000057525 A030005K14RikA0A1Y7VNY1 122 aa3.2□□□□□ -1.9
Trim3-201ENSMUST00000057525 A0A286YCP9 139 aa3.14□□□□□ -1.91
Trim3-201ENSMUST00000057525 Gm11567Q9D141 195 aa3.12□□□□□ -1.91
Trim3-201ENSMUST00000057525 Gm10229O08631 77 aa3.07□□□□□ -1.92
Trim3-201ENSMUST00000057525 Gm29735A0A1B0GT06 219 aa3.06□□□□□ -1.92
Trim3-201ENSMUST00000057525 Krtap28-13A0A087WQP5 138 aa2.98□□□□□ -1.93
Trim3-201ENSMUST00000057525 Krtap21-1Q925H4 128 aa2.8□□□□□ -1.96
Trim3-201ENSMUST00000057525 Sprr2bO70554 98 aa2.76□□□□□ -1.97
Trim3-201ENSMUST00000057525 Krtap6-2O08884 159 aa2.67□□□□□ -1.98
Trim3-201ENSMUST00000057525 Phgr1Q8K0G7 91 aa2.5□□□□□ -2.01
Trim3-201ENSMUST00000057525 A030014E15RikA0A1Y7VJV2 120 aa2.2□□□□□ -2.06
Trim3-201ENSMUST00000057525 Krtap5-1Q64507 230 aa2.17□□□□□ -2.06
Trim3-201ENSMUST00000057525 Gm4559A4IF42 199 aa1.78□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 186 ms