RNA–Protein interactions for RNA: ENSMUST00000055006.11

Trim16-201, Transcript of Tripartite motif-containing protein 16, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim16, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16-201ENSMUST00000055006 A0A1Y7VJ07 166 aa2.57□□□□□ -2
Trim16-201ENSMUST00000055006 Muc16A0A140LJ72 8478 aa2.56□□□□□ -2
Trim16-201ENSMUST00000055006 Sprr2kO70562 68 aa2.56□□□□□ -2
Trim16-201ENSMUST00000055006 Gm10142J3KMP7 120 aa2.54□□□□□ -2
Trim16-201ENSMUST00000055006 Krtap31-1Q9D644 177 aa2.54□□□□□ -2
Trim16-201ENSMUST00000055006 Lce1fB9EJP6 147 aa2.51□□□□□ -2.01
Trim16-201ENSMUST00000055006 Lce1a1Q9CQH5 143 aa2.51□□□□□ -2.01
Trim16-201ENSMUST00000055006 Macf1Q9QXZ0 7354 aaKnown RBP2.49□□□□□ -2.01
Trim16-201ENSMUST00000055006 Gm11562A0PK51 136 aa2.49□□□□□ -2.01
Trim16-201ENSMUST00000055006 Lce3cQ91V05 98 aa2.49□□□□□ -2.01
Trim16-201ENSMUST00000055006 Lce3dE9Q8V1 98 aa2.46□□□□□ -2.02
Trim16-201ENSMUST00000055006 Krtap19-4Q925H7 84 aa2.46□□□□□ -2.02
Trim16-201ENSMUST00000055006 Fsip2A2ARZ3 6995 aa2.46□□□□□ -2.02
Trim16-201ENSMUST00000055006 Lce1bQ9D149 137 aa2.44□□□□□ -2.02
Trim16-201ENSMUST00000055006 Lce3eF8VQJ0 98 aa2.41□□□□□ -2.02
Trim16-201ENSMUST00000055006 Lce3fQ6PAI4 98 aa2.41□□□□□ -2.02
Trim16-201ENSMUST00000055006 Lce1gQ9D195 139 aa2.39□□□□□ -2.03
Trim16-201ENSMUST00000055006 Gm38119A0A0A6YX29 146 aa2.36□□□□□ -2.03
Trim16-201ENSMUST00000055006 Sprr2iO70560 76 aa2.36□□□□□ -2.03
Trim16-201ENSMUST00000055006 Krtap4-6Q3V4B7 195 aa2.36□□□□□ -2.03
Trim16-201ENSMUST00000055006 ObscnA2AAJ9 8891 aaKnown RBP2.36□□□□□ -2.03
Trim16-201ENSMUST00000055006 Syne2Q6ZWQ0 6874 aaKnown RBP2.36□□□□□ -2.03
Trim16-201ENSMUST00000055006 Lce3aQ497I5 98 aa2.36□□□□□ -2.03
Trim16-201ENSMUST00000055006 Sprr2hO70559 108 aa2.34□□□□□ -2.03
Trim16-201ENSMUST00000055006 Gm11596B1AQB0 205 aa2.33□□□□□ -2.04
Trim16-201ENSMUST00000055006 Krtap28-13A0A087WQP5 138 aa2.31□□□□□ -2.04
Trim16-201ENSMUST00000055006 Sprr2fO70557 76 aa2.28□□□□□ -2.04
Trim16-201ENSMUST00000055006 Krtap4-16Q91W93 202 aa2.27□□□□□ -2.05
Trim16-201ENSMUST00000055006 Sprr2eO70556 76 aa2.26□□□□□ -2.05
Trim16-201ENSMUST00000055006 Gm11564A2A4L9 201 aa2.26□□□□□ -2.05
Trim16-201ENSMUST00000055006 Gm11595B1AQA7 289 aa2.26□□□□□ -2.05
Trim16-201ENSMUST00000055006 Krtap4-8B1AQA8 209 aa2.26□□□□□ -2.05
Trim16-201ENSMUST00000055006 Mt4P47945 62 aa2.25□□□□□ -2.05
Trim16-201ENSMUST00000055006 2300003K06RikA2A4M0 262 aa2.22□□□□□ -2.05
Trim16-201ENSMUST00000055006 Lce1lQ9D1G7 135 aa2.2□□□□□ -2.06
Trim16-201ENSMUST00000055006 Krtap4-9B1AQA9 244 aa2.19□□□□□ -2.06
Trim16-201ENSMUST00000055006 DstQ91ZU6 7393 aaKnown RBP2.17□□□□□ -2.06
Trim16-201ENSMUST00000055006 Gm11559Q9D3H7 191 aa2.16□□□□□ -2.06
Trim16-201ENSMUST00000055006 A0A286YCP9 139 aa2.16□□□□□ -2.06
Trim16-201ENSMUST00000055006 Lce1kJ3QP15 125 aa2.14□□□□□ -2.07
Trim16-201ENSMUST00000055006 Krtap4-13Q9D7P3 165 aa2.1□□□□□ -2.07
Trim16-201ENSMUST00000055006 Mt1P02802 61 aaKnown RBP2.1□□□□□ -2.07
Trim16-201ENSMUST00000055006 Muc19Q6PZE0 7524 aa2.09□□□□□ -2.08
Trim16-201ENSMUST00000055006 NebE9Q1W3 7152 aa2.09□□□□□ -2.08
Trim16-201ENSMUST00000055006 Gm10024A0A0A0MQA4 119 aa2.08□□□□□ -2.08
Trim16-201ENSMUST00000055006 Krtap6-3A0A087WQL6 57 aa2.01□□□□□ -2.09
Trim16-201ENSMUST00000055006 A030014E15RikA0A1Y7VJV2 120 aa1.98□□□□□ -2.09
Trim16-201ENSMUST00000055006 Krtap5-2Q9D5Z7 189 aa1.97□□□□□ -2.09
Trim16-201ENSMUST00000055006 Krtap20-2E9Q0A8 60 aa1.95□□□□□ -2.1
Trim16-201ENSMUST00000055006 Gm11568A2A4M2 211 aa1.93□□□□□ -2.1
Trim16-201ENSMUST00000055006 Krtap9-1Q64526 186 aa1.93□□□□□ -2.1
Trim16-201ENSMUST00000055006 Mt3P28184 68 aa1.86□□□□□ -2.11
Trim16-201ENSMUST00000055006 Gm10153A0A1B0GRL1 320 aa1.85□□□□□ -2.11
Trim16-201ENSMUST00000055006 Gm11554B1AQB2 190 aa1.85□□□□□ -2.11
Trim16-201ENSMUST00000055006 Kmt2dQ6PDK2 5588 aa1.84□□□□□ -2.11
Trim16-201ENSMUST00000055006 Gm4553A0A1B0GSA9 284 aa1.83□□□□□ -2.12
Trim16-201ENSMUST00000055006 Gm45337A0A1B0GS71 263 aa1.82□□□□□ -2.12
Trim16-201ENSMUST00000055006 Hmcn1D3YXG0 5634 aa1.81□□□□□ -2.12
Trim16-201ENSMUST00000055006 Gm2431E9Q8S1 172 aa1.77□□□□□ -2.13
Trim16-201ENSMUST00000055006 Gm40460A0A1B0GR10 244 aa1.77□□□□□ -2.13
Trim16-201ENSMUST00000055006 Gm7579A0A1B0GRJ4 243 aa1.77□□□□□ -2.13
Trim16-201ENSMUST00000055006 Krtap5-5Q2TA51 241 aa1.77□□□□□ -2.13
Trim16-201ENSMUST00000055006 Krtap5-4Q62220 223 aa1.77□□□□□ -2.13
Trim16-201ENSMUST00000055006 Gpr98Q8VHN7 6298 aaKnown RBP1.68□□□□□ -2.14
Trim16-201ENSMUST00000055006 Gm39115A0A1B0GSH7 232 aa1.68□□□□□ -2.14
Trim16-201ENSMUST00000055006 Gm11639A0A1D5RLM8 5808 aa1.65□□□□□ -2.15
Trim16-201ENSMUST00000055006 1110025L11RikO09048 78 aa1.64□□□□□ -2.15
Trim16-201ENSMUST00000055006 Krtap6-5Q925H3 78 aa1.64□□□□□ -2.15
Trim16-201ENSMUST00000055006 Eppk1Q8R0W0 6548 aa1.61□□□□□ -2.15
Trim16-201ENSMUST00000055006 Sprr2bO70554 98 aa1.52□□□□□ -2.17
Trim16-201ENSMUST00000055006 Gm45618A0A1B0GSA0 219 aa1.51□□□□□ -2.17
Trim16-201ENSMUST00000055006 Gm10229O08631 77 aa1.46□□□□□ -2.18
Trim16-201ENSMUST00000055006 AhnakE9Q616 5656 aaKnown RBP1.44□□□□□ -2.18
Trim16-201ENSMUST00000055006 Phgr1Q8K0G7 91 aa1.42□□□□□ -2.18
Trim16-201ENSMUST00000055006 Krtap21-1Q925H4 128 aa1.33□□□□□ -2.2
Trim16-201ENSMUST00000055006 Gm29735A0A1B0GT06 219 aa1.33□□□□□ -2.2
Trim16-201ENSMUST00000055006 Gm11567Q9D141 195 aa1.32□□□□□ -2.2
Trim16-201ENSMUST00000055006 Krtap6-2O08884 159 aa1.21□□□□□ -2.22
Trim16-201ENSMUST00000055006 Gm4559A4IF42 199 aa0.93□□□□□ -2.26
Trim16-201ENSMUST00000055006 Krtap5-1Q64507 230 aa0.89□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 160.6 ms