RNA–Protein interactions for RNA: ENSMUST00000052239.11

Pbrm1-203, Transcript of Protein polybromo-1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Pbrm1, Length 5,065 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1-203ENSMUST00000052239 Sprr2iO70560 76 aa4.16□□□□□ -1.74
Pbrm1-203ENSMUST00000052239 Lce1cQ9D1C5 147 aa4.14□□□□□ -1.75
Pbrm1-203ENSMUST00000052239 Syne2Q6ZWQ0 6874 aaKnown RBP4.12□□□□□ -1.75
Pbrm1-203ENSMUST00000052239 Lce1fB9EJP6 147 aa4.11□□□□□ -1.75
Pbrm1-203ENSMUST00000052239 Lce1lQ9D1G7 135 aa4.11□□□□□ -1.75
Pbrm1-203ENSMUST00000052239 Lce1bQ9D149 137 aa4.1□□□□□ -1.75
Pbrm1-203ENSMUST00000052239 Gm11564A2A4L9 201 aa4.09□□□□□ -1.76
Pbrm1-203ENSMUST00000052239 Gm11563B1AQ90 168 aa4.09□□□□□ -1.76
Pbrm1-203ENSMUST00000052239 Gm11595B1AQA7 289 aa4.09□□□□□ -1.76
Pbrm1-203ENSMUST00000052239 Krtap4-8B1AQA8 209 aa4.09□□□□□ -1.76
Pbrm1-203ENSMUST00000052239 Gm11555B1AQ89 175 aa4.08□□□□□ -1.76
Pbrm1-203ENSMUST00000052239 Krtap4-9B1AQA9 244 aa4.01□□□□□ -1.77
Pbrm1-203ENSMUST00000052239 Lce1a1Q9CQH5 143 aa3.97□□□□□ -1.77
Pbrm1-203ENSMUST00000052239 Sprr2hO70559 108 aa3.95□□□□□ -1.78
Pbrm1-203ENSMUST00000052239 Fsip2A2ARZ3 6995 aa3.95□□□□□ -1.78
Pbrm1-203ENSMUST00000052239 2300003K06RikA2A4M0 262 aa3.95□□□□□ -1.78
Pbrm1-203ENSMUST00000052239 A0A1Y7VLE6 161 aa3.9□□□□□ -1.78
Pbrm1-203ENSMUST00000052239 Sprr2eO70556 76 aa3.9□□□□□ -1.79
Pbrm1-203ENSMUST00000052239 Krtap4-13Q9D7P3 165 aa3.88□□□□□ -1.79
Pbrm1-203ENSMUST00000052239 Sprr2fO70557 76 aa3.87□□□□□ -1.79
Pbrm1-203ENSMUST00000052239 Lce1kJ3QP15 125 aa3.86□□□□□ -1.79
Pbrm1-203ENSMUST00000052239 Syne1Q6ZWR6 8799 aa3.86□□□□□ -1.79
Pbrm1-203ENSMUST00000052239 Krtap31-1Q9D644 177 aa3.84□□□□□ -1.8
Pbrm1-203ENSMUST00000052239 Krtap4-7Q9D732 168 aa3.83□□□□□ -1.8
Pbrm1-203ENSMUST00000052239 Gm10024A0A0A0MQA4 119 aa3.81□□□□□ -1.8
Pbrm1-203ENSMUST00000052239 Mt1P02802 61 aaKnown RBP3.77□□□□□ -1.81
Pbrm1-203ENSMUST00000052239 A0A1Y7VJH8 109 aa3.75□□□□□ -1.81
Pbrm1-203ENSMUST00000052239 ObscnA2AAJ9 8891 aaKnown RBP3.68□□□□□ -1.82
Pbrm1-203ENSMUST00000052239 Krtap28-10A0A1Y7VP58 119 aa3.67□□□□□ -1.82
Pbrm1-203ENSMUST00000052239 Krtap6-3A0A087WQL6 57 aa3.66□□□□□ -1.82
Pbrm1-203ENSMUST00000052239 Mt3P28184 68 aa3.59□□□□□ -1.84
Pbrm1-203ENSMUST00000052239 Krtap20-2E9Q0A8 60 aa3.55□□□□□ -1.84
Pbrm1-203ENSMUST00000052239 Krtap28-13A0A087WQP5 138 aa3.53□□□□□ -1.84
Pbrm1-203ENSMUST00000052239 Krtap4-16Q91W93 202 aa3.53□□□□□ -1.84
Pbrm1-203ENSMUST00000052239 A030003K21RikA0A1Y7VIM3 128 aa3.52□□□□□ -1.85
Pbrm1-203ENSMUST00000052239 A030005K14RikA0A1Y7VNY1 122 aa3.43□□□□□ -1.86
Pbrm1-203ENSMUST00000052239 A030005L19RikA0A1Y7VIU2 113 aa3.41□□□□□ -1.86
Pbrm1-203ENSMUST00000052239 Gm11568A2A4M2 211 aa3.38□□□□□ -1.87
Pbrm1-203ENSMUST00000052239 Krtap9-1Q64526 186 aa3.38□□□□□ -1.87
Pbrm1-203ENSMUST00000052239 Gm7544A0A1Y7VJ58 118 aa3.33□□□□□ -1.88
Pbrm1-203ENSMUST00000052239 A0A1Y7VJ07 166 aa3.32□□□□□ -1.88
Pbrm1-203ENSMUST00000052239 Gm6217A0A1Y7VJK9 128 aa3.3□□□□□ -1.88
Pbrm1-203ENSMUST00000052239 Macf1Q9QXZ0 7354 aaKnown RBP3.26□□□□□ -1.89
Pbrm1-203ENSMUST00000052239 Krtap5-2Q9D5Z7 189 aa3.25□□□□□ -1.89
Pbrm1-203ENSMUST00000052239 Gm11554B1AQB2 190 aa3.24□□□□□ -1.89
Pbrm1-203ENSMUST00000052239 Gm11559Q9D3H7 191 aa3.12□□□□□ -1.91
Pbrm1-203ENSMUST00000052239 Muc16A0A140LJ72 8478 aa3.09□□□□□ -1.91
Pbrm1-203ENSMUST00000052239 A030014E15RikA0A1Y7VJV2 120 aa3.06□□□□□ -1.92
Pbrm1-203ENSMUST00000052239 Gm10153A0A1B0GRL1 320 aa3.04□□□□□ -1.92
Pbrm1-203ENSMUST00000052239 Gm4553A0A1B0GSA9 284 aa2.99□□□□□ -1.93
Pbrm1-203ENSMUST00000052239 Eppk1Q8R0W0 6548 aa2.98□□□□□ -1.93
Pbrm1-203ENSMUST00000052239 1110025L11RikO09048 78 aa2.98□□□□□ -1.93
Pbrm1-203ENSMUST00000052239 Krtap6-5Q925H3 78 aa2.98□□□□□ -1.93
Pbrm1-203ENSMUST00000052239 Kmt2dQ6PDK2 5588 aa2.97□□□□□ -1.93
Pbrm1-203ENSMUST00000052239 Sprr2bO70554 98 aa2.97□□□□□ -1.93
Pbrm1-203ENSMUST00000052239 Krtap31-2Q8CAY5 177 aa2.9□□□□□ -1.94
Pbrm1-203ENSMUST00000052239 DstQ91ZU6 7393 aaKnown RBP2.9□□□□□ -1.95
Pbrm1-203ENSMUST00000052239 Gm2431E9Q8S1 172 aa2.89□□□□□ -1.95
Pbrm1-203ENSMUST00000052239 Gm45337A0A1B0GS71 263 aa2.89□□□□□ -1.95
Pbrm1-203ENSMUST00000052239 Hmcn1D3YXG0 5634 aa2.88□□□□□ -1.95
Pbrm1-203ENSMUST00000052239 Gm40460A0A1B0GR10 244 aa2.83□□□□□ -1.96
Pbrm1-203ENSMUST00000052239 Gm7579A0A1B0GRJ4 243 aa2.83□□□□□ -1.96
Pbrm1-203ENSMUST00000052239 Krtap5-5Q2TA51 241 aa2.83□□□□□ -1.96
Pbrm1-203ENSMUST00000052239 Krtap5-4Q62220 223 aa2.83□□□□□ -1.96
Pbrm1-203ENSMUST00000052239 Gm11639A0A1D5RLM8 5808 aa2.78□□□□□ -1.96
Pbrm1-203ENSMUST00000052239 NebE9Q1W3 7152 aa2.74□□□□□ -1.97
Pbrm1-203ENSMUST00000052239 Gm10229O08631 77 aa2.69□□□□□ -1.98
Pbrm1-203ENSMUST00000052239 Muc19Q6PZE0 7524 aa2.69□□□□□ -1.98
Pbrm1-203ENSMUST00000052239 Gpr98Q8VHN7 6298 aaKnown RBP2.67□□□□□ -1.98
Pbrm1-203ENSMUST00000052239 Gm39115A0A1B0GSH7 232 aa2.64□□□□□ -1.99
Pbrm1-203ENSMUST00000052239 AhnakE9Q616 5656 aaKnown RBP2.51□□□□□ -2.01
Pbrm1-203ENSMUST00000052239 A0A286YCP9 139 aa2.44□□□□□ -2.02
Pbrm1-203ENSMUST00000052239 Phgr1Q8K0G7 91 aa2.39□□□□□ -2.03
Pbrm1-203ENSMUST00000052239 Gm45618A0A1B0GSA0 219 aa2.35□□□□□ -2.03
Pbrm1-203ENSMUST00000052239 Krtap21-1Q925H4 128 aa2.34□□□□□ -2.04
Pbrm1-203ENSMUST00000052239 Gm11567Q9D141 195 aa2.23□□□□□ -2.05
Pbrm1-203ENSMUST00000052239 Krtap6-2O08884 159 aa2.22□□□□□ -2.05
Pbrm1-203ENSMUST00000052239 Gm29735A0A1B0GT06 219 aa2.15□□□□□ -2.07
Pbrm1-203ENSMUST00000052239 Krtap5-1Q64507 230 aa1.47□□□□□ -2.17
Pbrm1-203ENSMUST00000052239 Gm4559A4IF42 199 aa1.18□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 10.4 ms