RNA–Protein interactions for RNA: ENSMUST00000039541.11

Tubgcp4-201, Transcript of Gamma-tubulin complex component 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Tubgcp4, Length 4,206 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4-201ENSMUST00000039541 Gm11564A2A4L9 201 aa3.88□□□□□ -1.79
Tubgcp4-201ENSMUST00000039541 Gm11563B1AQ90 168 aa3.88□□□□□ -1.79
Tubgcp4-201ENSMUST00000039541 Gm11595B1AQA7 289 aa3.88□□□□□ -1.79
Tubgcp4-201ENSMUST00000039541 Krtap4-8B1AQA8 209 aa3.88□□□□□ -1.79
Tubgcp4-201ENSMUST00000039541 Gm10100J3QK64 120 aa3.85□□□□□ -1.79
Tubgcp4-201ENSMUST00000039541 2310046K23RikA0A0A6YVW6 87 aa3.82□□□□□ -1.8
Tubgcp4-201ENSMUST00000039541 Lce1lQ9D1G7 135 aa3.82□□□□□ -1.8
Tubgcp4-201ENSMUST00000039541 Lce1bQ9D149 137 aa3.82□□□□□ -1.8
Tubgcp4-201ENSMUST00000039541 Lce3eF8VQJ0 98 aa3.81□□□□□ -1.8
Tubgcp4-201ENSMUST00000039541 Lce3fQ6PAI4 98 aa3.81□□□□□ -1.8
Tubgcp4-201ENSMUST00000039541 Krtap4-13Q9D7P3 165 aa3.81□□□□□ -1.8
Tubgcp4-201ENSMUST00000039541 A030003K21RikA0A1Y7VIM3 128 aa3.77□□□□□ -1.81
Tubgcp4-201ENSMUST00000039541 Lce1fB9EJP6 147 aa3.76□□□□□ -1.81
Tubgcp4-201ENSMUST00000039541 Lce1cQ9D1C5 147 aa3.76□□□□□ -1.81
Tubgcp4-201ENSMUST00000039541 Lce1dQ9D731 133 aa3.76□□□□□ -1.81
Tubgcp4-201ENSMUST00000039541 Sprr2iO70560 76 aa3.76□□□□□ -1.81
Tubgcp4-201ENSMUST00000039541 2300003K06RikA2A4M0 262 aa3.75□□□□□ -1.81
Tubgcp4-201ENSMUST00000039541 Lce3dE9Q8V1 98 aa3.7□□□□□ -1.82
Tubgcp4-201ENSMUST00000039541 Gm10142J3KMP7 120 aa3.68□□□□□ -1.82
Tubgcp4-201ENSMUST00000039541 Krtap4-7Q9D732 168 aa3.68□□□□□ -1.82
Tubgcp4-201ENSMUST00000039541 A0A1Y7VJ07 166 aa3.66□□□□□ -1.82
Tubgcp4-201ENSMUST00000039541 Lce3aQ497I5 98 aa3.65□□□□□ -1.82
Tubgcp4-201ENSMUST00000039541 Gm6217A0A1Y7VJK9 128 aa3.63□□□□□ -1.83
Tubgcp4-201ENSMUST00000039541 Lce1eQ9D139 143 aa3.63□□□□□ -1.83
Tubgcp4-201ENSMUST00000039541 ObscnA2AAJ9 8891 aaKnown RBP3.55□□□□□ -1.84
Tubgcp4-201ENSMUST00000039541 Gm11555B1AQ89 175 aa3.55□□□□□ -1.84
Tubgcp4-201ENSMUST00000039541 Lce1kJ3QP15 125 aa3.55□□□□□ -1.84
Tubgcp4-201ENSMUST00000039541 Gm11562A0PK51 136 aa3.5□□□□□ -1.85
Tubgcp4-201ENSMUST00000039541 Muc19Q6PZE0 7524 aa3.49□□□□□ -1.85
Tubgcp4-201ENSMUST00000039541 Krtap19-4Q925H7 84 aa3.44□□□□□ -1.86
Tubgcp4-201ENSMUST00000039541 A030014E15RikA0A1Y7VJV2 120 aa3.43□□□□□ -1.86
Tubgcp4-201ENSMUST00000039541 DstQ91ZU6 7393 aaKnown RBP3.42□□□□□ -1.86
Tubgcp4-201ENSMUST00000039541 Sprr2eO70556 76 aa3.38□□□□□ -1.87
Tubgcp4-201ENSMUST00000039541 Lce1a1Q9CQH5 143 aa3.37□□□□□ -1.87
Tubgcp4-201ENSMUST00000039541 NebE9Q1W3 7152 aa3.36□□□□□ -1.87
Tubgcp4-201ENSMUST00000039541 Gm11938Q9D3H4 131 aa3.33□□□□□ -1.88
Tubgcp4-201ENSMUST00000039541 Krtap20-2E9Q0A8 60 aa3.32□□□□□ -1.88
Tubgcp4-201ENSMUST00000039541 Gm11554B1AQB2 190 aa3.31□□□□□ -1.88
Tubgcp4-201ENSMUST00000039541 Gm10024A0A0A0MQA4 119 aa3.27□□□□□ -1.89
Tubgcp4-201ENSMUST00000039541 Sprr2dO70555 85 aa3.25□□□□□ -1.89
Tubgcp4-201ENSMUST00000039541 Sprr2fO70557 76 aa3.25□□□□□ -1.89
Tubgcp4-201ENSMUST00000039541 Krtap6-3A0A087WQL6 57 aa3.24□□□□□ -1.89
Tubgcp4-201ENSMUST00000039541 Krtap31-1Q9D644 177 aa3.08□□□□□ -1.92
Tubgcp4-201ENSMUST00000039541 Mt1P02802 61 aaKnown RBP3.07□□□□□ -1.92
Tubgcp4-201ENSMUST00000039541 Krtap4-16Q91W93 202 aa3.04□□□□□ -1.92
Tubgcp4-201ENSMUST00000039541 Mt3P28184 68 aa3.03□□□□□ -1.92
Tubgcp4-201ENSMUST00000039541 Sprr2hO70559 108 aa2.99□□□□□ -1.93
Tubgcp4-201ENSMUST00000039541 Kmt2dQ6PDK2 5588 aa2.97□□□□□ -1.93
Tubgcp4-201ENSMUST00000039541 A0A286YCP9 139 aa2.96□□□□□ -1.94
Tubgcp4-201ENSMUST00000039541 Gm11568A2A4M2 211 aa2.89□□□□□ -1.95
Tubgcp4-201ENSMUST00000039541 Krtap9-1Q64526 186 aa2.89□□□□□ -1.95
Tubgcp4-201ENSMUST00000039541 Hmcn1D3YXG0 5634 aa2.89□□□□□ -1.95
Tubgcp4-201ENSMUST00000039541 Gm11639A0A1D5RLM8 5808 aa2.82□□□□□ -1.96
Tubgcp4-201ENSMUST00000039541 Eppk1Q8R0W0 6548 aa2.79□□□□□ -1.96
Tubgcp4-201ENSMUST00000039541 Gpr98Q8VHN7 6298 aaKnown RBP2.73□□□□□ -1.97
Tubgcp4-201ENSMUST00000039541 Gm11559Q9D3H7 191 aa2.73□□□□□ -1.97
Tubgcp4-201ENSMUST00000039541 Krtap5-2Q9D5Z7 189 aa2.65□□□□□ -1.98
Tubgcp4-201ENSMUST00000039541 Sprr2bO70554 98 aa2.51□□□□□ -2.01
Tubgcp4-201ENSMUST00000039541 Krtap31-2Q8CAY5 177 aa2.49□□□□□ -2.01
Tubgcp4-201ENSMUST00000039541 Gm4553A0A1B0GSA9 284 aa2.48□□□□□ -2.01
Tubgcp4-201ENSMUST00000039541 Gm2431E9Q8S1 172 aa2.48□□□□□ -2.01
Tubgcp4-201ENSMUST00000039541 Gm10153A0A1B0GRL1 320 aa2.42□□□□□ -2.02
Tubgcp4-201ENSMUST00000039541 1110025L11RikO09048 78 aa2.4□□□□□ -2.02
Tubgcp4-201ENSMUST00000039541 Krtap6-5Q925H3 78 aa2.4□□□□□ -2.02
Tubgcp4-201ENSMUST00000039541 Gm45337A0A1B0GS71 263 aa2.29□□□□□ -2.04
Tubgcp4-201ENSMUST00000039541 AhnakE9Q616 5656 aaKnown RBP2.28□□□□□ -2.04
Tubgcp4-201ENSMUST00000039541 Gm10229O08631 77 aa2.21□□□□□ -2.06
Tubgcp4-201ENSMUST00000039541 Gm40460A0A1B0GR10 244 aa2.18□□□□□ -2.06
Tubgcp4-201ENSMUST00000039541 Gm7579A0A1B0GRJ4 243 aa2.18□□□□□ -2.06
Tubgcp4-201ENSMUST00000039541 Krtap5-5Q2TA51 241 aa2.18□□□□□ -2.06
Tubgcp4-201ENSMUST00000039541 Krtap5-4Q62220 223 aa2.18□□□□□ -2.06
Tubgcp4-201ENSMUST00000039541 Gm45618A0A1B0GSA0 219 aa2.1□□□□□ -2.07
Tubgcp4-201ENSMUST00000039541 Gm39115A0A1B0GSH7 232 aa2.08□□□□□ -2.08
Tubgcp4-201ENSMUST00000039541 Phgr1Q8K0G7 91 aa1.98□□□□□ -2.09
Tubgcp4-201ENSMUST00000039541 Gm11567Q9D141 195 aa1.9□□□□□ -2.11
Tubgcp4-201ENSMUST00000039541 Krtap6-2O08884 159 aa1.87□□□□□ -2.11
Tubgcp4-201ENSMUST00000039541 Krtap21-1Q925H4 128 aa1.81□□□□□ -2.12
Tubgcp4-201ENSMUST00000039541 Gm29735A0A1B0GT06 219 aa1.77□□□□□ -2.13
Tubgcp4-201ENSMUST00000039541 Krtap5-1Q64507 230 aa1.49□□□□□ -2.17
Tubgcp4-201ENSMUST00000039541 Gm4559A4IF42 199 aa1.32□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 216 ms