RNA–Protein interactions for RNA: ENSMUST00000039541.11

Tubgcp4-201, Transcript of Gamma-tubulin complex component 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Tubgcp4, Length 4,206 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4-201ENSMUST00000039541 Rhox8Q6VSS7 320 aa20.99■□□□□ 0.95
Tubgcp4-201ENSMUST00000039541 NischQ80TM9 1593 aa19.79■□□□□ 0.76
Tubgcp4-201ENSMUST00000039541 Ccdc136Q3TVA9 1136 aa19.15■□□□□ 0.66
Tubgcp4-201ENSMUST00000039541 Ehmt2Q9Z148 1263 aaKnown RBP18.75■□□□□ 0.59
Tubgcp4-201ENSMUST00000039541 Abcc9P70170 1546 aa18.71■□□□□ 0.59
Tubgcp4-201ENSMUST00000039541 Cngb1E1AZ71 1325 aa18.53■□□□□ 0.56
Tubgcp4-201ENSMUST00000039541 Esf1Q3V1V3 845 aaKnown RBP18.53■□□□□ 0.56
Tubgcp4-201ENSMUST00000039541 Gm35339A0A140LHH9 1649 aa18.47■□□□□ 0.55
Tubgcp4-201ENSMUST00000039541 Abcc8B2RUS7 1588 aa18.41■□□□□ 0.54
Tubgcp4-201ENSMUST00000039541 Gab3Q8BSM5 595 aa18.38■□□□□ 0.53
Tubgcp4-201ENSMUST00000039541 Trim41Q5NCC3 630 aa18.21■□□□□ 0.51
Tubgcp4-201ENSMUST00000039541 Zcchc6Q5BLK4 1491 aaKnown RBP18.01■□□□□ 0.47
Tubgcp4-201ENSMUST00000039541 Myt1lP97500 1187 aa17.93■□□□□ 0.46
Tubgcp4-201ENSMUST00000039541 Zeb1Q64318 1117 aa17.88■□□□□ 0.45
Tubgcp4-201ENSMUST00000039541 Npm2Q80W85 207 aa17.85■□□□□ 0.45
Tubgcp4-201ENSMUST00000039541 Il27Q8K3I6 234 aa17.8■□□□□ 0.44
Tubgcp4-201ENSMUST00000039541 UbtfP25976 765 aaKnown RBP17.42■□□□□ 0.38
Tubgcp4-201ENSMUST00000039541 Ube2uB1AUC4 352 aa17.4■□□□□ 0.38
Tubgcp4-201ENSMUST00000039541 Ccdc180J3QNE4 1664 aa17.36■□□□□ 0.37
Tubgcp4-201ENSMUST00000039541 HrcG5E8J6 738 aa17.36■□□□□ 0.37
Tubgcp4-201ENSMUST00000039541 Rb1cc1Q9ESK9 1588 aa17.35■□□□□ 0.37
Tubgcp4-201ENSMUST00000039541 Ap3b1Q9Z1T1 1105 aa17.3■□□□□ 0.36
Tubgcp4-201ENSMUST00000039541 Wdr66E9Q743 1299 aa17.25■□□□□ 0.35
Tubgcp4-201ENSMUST00000039541 Rpgrip1Q9EPQ2 1331 aa17.25■□□□□ 0.35
Tubgcp4-201ENSMUST00000039541 Chic1Q8CBW7 227 aa17.2■□□□□ 0.34
Tubgcp4-201ENSMUST00000039541 NacadQ5SWP3 1504 aa17.15■□□□□ 0.34
Tubgcp4-201ENSMUST00000039541 Rtl1Q7M732 1744 aa17.15■□□□□ 0.34
Tubgcp4-201ENSMUST00000039541 Kdm5dQ62240 1548 aa17.14■□□□□ 0.33
Tubgcp4-201ENSMUST00000039541 ScribQ80U72 1612 aa17.11■□□□□ 0.33
Tubgcp4-201ENSMUST00000039541 Dcaf1Q80TR8 1506 aa17.05■□□□□ 0.32
Tubgcp4-201ENSMUST00000039541 Las1lA2BE28 776 aaKnown RBP17.02■□□□□ 0.31
Tubgcp4-201ENSMUST00000039541 Acin1Q9JIX8 1338 aaKnown RBP17.01■□□□□ 0.31
Tubgcp4-201ENSMUST00000039541 Npm1Q61937 292 aaKnown RBP16.98■□□□□ 0.31
Tubgcp4-201ENSMUST00000039541 Ppargc1bQ8VHJ7 1014 aa16.93■□□□□ 0.3
Tubgcp4-201ENSMUST00000039541 Brd4Q9ESU6 1400 aaKnown RBP16.91■□□□□ 0.3
Tubgcp4-201ENSMUST00000039541 Baz1aO88379 1555 aa16.9■□□□□ 0.3
Tubgcp4-201ENSMUST00000039541 Plekhg3Q4VAC9 1341 aa16.89■□□□□ 0.3
Tubgcp4-201ENSMUST00000039541 Fam50aQ9WV03 339 aaKnown RBP16.89■□□□□ 0.29
Tubgcp4-201ENSMUST00000039541 Lmod2Q3UHZ5 550 aa16.88■□□□□ 0.29
Tubgcp4-201ENSMUST00000039541 Ubl4bQ9CQ84 188 aa16.86■□□□□ 0.29
Tubgcp4-201ENSMUST00000039541 Ifnlr1Q8CGK5 535 aa16.72■□□□□ 0.27
Tubgcp4-201ENSMUST00000039541 Mier1Q5UAK0 511 aa16.69■□□□□ 0.26
Tubgcp4-201ENSMUST00000039541 Neurod1Q60867 357 aa16.67■□□□□ 0.26
Tubgcp4-201ENSMUST00000039541 Zbtb7cQ8VCZ7 619 aa16.66■□□□□ 0.26
Tubgcp4-201ENSMUST00000039541 Fkbp15Q6P9Q6 1216 aaKnown RBP16.65■□□□□ 0.26
Tubgcp4-201ENSMUST00000039541 NefmP08553 848 aa16.63■□□□□ 0.25
Tubgcp4-201ENSMUST00000039541 Sycp2Q9CUU3 1500 aa16.61■□□□□ 0.25
Tubgcp4-201ENSMUST00000039541 Cep164Q5DU05 1446 aa16.58■□□□□ 0.25
Tubgcp4-201ENSMUST00000039541 Cecr2E9Q2Z1 1453 aa16.55■□□□□ 0.24
Tubgcp4-201ENSMUST00000039541 Slc24a1Q91WD8 1130 aa16.55■□□□□ 0.24
Tubgcp4-201ENSMUST00000039541 Eid3Q3V124 375 aa16.54■□□□□ 0.24
Tubgcp4-201ENSMUST00000039541 Kif15Q6P9L6 1387 aa16.52■□□□□ 0.23
Tubgcp4-201ENSMUST00000039541 Rsf1E9PWW9 1441 aaKnown RBP16.51■□□□□ 0.23
Tubgcp4-201ENSMUST00000039541 Golga3P55937 1487 aa16.48■□□□□ 0.23
Tubgcp4-201ENSMUST00000039541 Clip1Q922J3 1391 aa16.46■□□□□ 0.23
Tubgcp4-201ENSMUST00000039541 Supt5hO55201 1082 aaKnown RBP16.43■□□□□ 0.22
Tubgcp4-201ENSMUST00000039541 Pcgf6Q99NA9 353 aa16.42■□□□□ 0.22
Tubgcp4-201ENSMUST00000039541 Ccdc88bQ4QRL3 1481 aa16.41■□□□□ 0.22
Tubgcp4-201ENSMUST00000039541 NclP09405 707 aaKnown RBP16.4■□□□□ 0.22
Tubgcp4-201ENSMUST00000039541 Mapk8ip2Q9ERE9 830 aa16.37■□□□□ 0.21
Tubgcp4-201ENSMUST00000039541 Hnrnpul2Q00PI9 745 aaKnown RBP16.32■□□□□ 0.2
Tubgcp4-201ENSMUST00000039541 Zbtb4Q5F293 982 aa16.31■□□□□ 0.2
Tubgcp4-201ENSMUST00000039541 Pelp1Q9DBD5 1123 aaKnown RBP16.31■□□□□ 0.2
Tubgcp4-201ENSMUST00000039541 Ercc6F8VPZ5 1481 aa16.29■□□□□ 0.2
Tubgcp4-201ENSMUST00000039541 TonslQ6NZL6 1363 aa16.29■□□□□ 0.2
Tubgcp4-201ENSMUST00000039541 Chic2Q9D9G3 165 aa16.28■□□□□ 0.2
Tubgcp4-201ENSMUST00000039541 Plppr3Q7TPB0 716 aa16.28■□□□□ 0.2
Tubgcp4-201ENSMUST00000039541 CftrP26361 1476 aa16.22■□□□□ 0.19
Tubgcp4-201ENSMUST00000039541 Pds5bQ4VA53 1446 aaKnown RBP16.22■□□□□ 0.19
Tubgcp4-201ENSMUST00000039541 Smarca2Q6DIC0 1577 aa16.19■□□□□ 0.18
Tubgcp4-201ENSMUST00000039541 Setd5Q5XJV7 1441 aa16.19■□□□□ 0.18
Tubgcp4-201ENSMUST00000039541 BlmO88700 1416 aa16.18■□□□□ 0.18
Tubgcp4-201ENSMUST00000039541 Os9Q8K2C7 672 aa16.18■□□□□ 0.18
Tubgcp4-201ENSMUST00000039541 Synj1Q8CHC4 1574 aa16.16■□□□□ 0.18
Tubgcp4-201ENSMUST00000039541 Erich6D3Z6S9 713 aa16.1■□□□□ 0.17
Tubgcp4-201ENSMUST00000039541 Crybg2B7ZCC2 1516 aa16.1■□□□□ 0.17
Tubgcp4-201ENSMUST00000039541 Arhgap27A2AB59 869 aa16.08■□□□□ 0.16
Tubgcp4-201ENSMUST00000039541 BicraF8VPZ9 1578 aa16.08■□□□□ 0.16
Tubgcp4-201ENSMUST00000039541 Ccdc18Q640L5 1455 aa16.07■□□□□ 0.16
Tubgcp4-201ENSMUST00000039541 Nop58Q6DFW4 536 aaKnown RBP16.04■□□□□ 0.16
Tubgcp4-201ENSMUST00000039541 Cdk11bP24788 784 aaKnown RBP16.03■□□□□ 0.16
Tubgcp4-201ENSMUST00000039541 Prdm10Q3UTQ7 1184 aa16.03■□□□□ 0.16
Tubgcp4-201ENSMUST00000039541 Sall2Q9QX96 1004 aa16.02■□□□□ 0.16
Tubgcp4-201ENSMUST00000039541 Atad2bE9Q166 1460 aaKnown RBP16.01■□□□□ 0.15
Tubgcp4-201ENSMUST00000039541 Cux2P70298 1426 aa16■□□□□ 0.15
Tubgcp4-201ENSMUST00000039541 Dnajc5bQ9CQ94 199 aa15.99■□□□□ 0.15
Tubgcp4-201ENSMUST00000039541 Eif5bQ05D44 1216 aaKnown RBP15.96■□□□□ 0.15
Tubgcp4-201ENSMUST00000039541 Smarca4Q3TKT4 1613 aaKnown RBP15.96■□□□□ 0.14
Tubgcp4-201ENSMUST00000039541 Fmn1Q05860 1466 aa15.93■□□□□ 0.14
Tubgcp4-201ENSMUST00000039541 Cep162Q6ZQ06 1403 aa15.91■□□□□ 0.14
Tubgcp4-201ENSMUST00000039541 Gm13697A2AK42 830 aa15.91■□□□□ 0.14
Tubgcp4-201ENSMUST00000039541 Ttbk1Q6PCN3 1308 aa15.91■□□□□ 0.14
Tubgcp4-201ENSMUST00000039541 Eea1Q8BL66 1411 aa15.91■□□□□ 0.14
Tubgcp4-201ENSMUST00000039541 Phldb1Q6PDH0 1371 aaKnown RBP15.87■□□□□ 0.13
Tubgcp4-201ENSMUST00000039541 Aebp2Q9Z248 504 aaKnown RBP15.87■□□□□ 0.13
Tubgcp4-201ENSMUST00000039541 Atp1b4Q99ME6 356 aa15.87■□□□□ 0.13
Tubgcp4-201ENSMUST00000039541 Rapgef2Q8CHG7 1496 aa15.86■□□□□ 0.13
Tubgcp4-201ENSMUST00000039541 Iqgap2Q3UQ44 1575 aa15.86■□□□□ 0.13
Tubgcp4-201ENSMUST00000039541 NrdcQ8BHG1 1161 aa15.85■□□□□ 0.13
Tubgcp4-201ENSMUST00000039541 ClspnQ80YR7 1315 aa15.79■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms