RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Mdn1A2ANY6 5589 aaKnown RBP4.99□□□□□ -1.61
Nup54-201ENSMUST00000038514 Lce1gQ9D195 139 aa4.87□□□□□ -1.63
Nup54-201ENSMUST00000038514 Krtap19-4Q925H7 84 aa4.85□□□□□ -1.63
Nup54-201ENSMUST00000038514 Krtap4-6Q3V4B7 195 aa4.83□□□□□ -1.64
Nup54-201ENSMUST00000038514 Lce1fB9EJP6 147 aa4.82□□□□□ -1.64
Nup54-201ENSMUST00000038514 Lce1a1Q9CQH5 143 aa4.82□□□□□ -1.64
Nup54-201ENSMUST00000038514 Gm10100J3QK64 120 aa4.81□□□□□ -1.64
Nup54-201ENSMUST00000038514 Lce3bQ9CQM7 98 aa4.79□□□□□ -1.64
Nup54-201ENSMUST00000038514 Syne2Q6ZWQ0 6874 aaKnown RBP4.75□□□□□ -1.65
Nup54-201ENSMUST00000038514 Gm11596B1AQB0 205 aa4.73□□□□□ -1.65
Nup54-201ENSMUST00000038514 Gm10142J3KMP7 120 aa4.73□□□□□ -1.65
Nup54-201ENSMUST00000038514 Sprr2iO70560 76 aa4.67□□□□□ -1.66
Nup54-201ENSMUST00000038514 Syne1Q6ZWR6 8799 aa4.6□□□□□ -1.67
Nup54-201ENSMUST00000038514 Sprr2hO70559 108 aa4.6□□□□□ -1.67
Nup54-201ENSMUST00000038514 Lce3cQ91V05 98 aa4.59□□□□□ -1.67
Nup54-201ENSMUST00000038514 Gm11564A2A4L9 201 aa4.57□□□□□ -1.68
Nup54-201ENSMUST00000038514 Gm11595B1AQA7 289 aa4.57□□□□□ -1.68
Nup54-201ENSMUST00000038514 Krtap4-8B1AQA8 209 aa4.57□□□□□ -1.68
Nup54-201ENSMUST00000038514 Lce3dE9Q8V1 98 aa4.56□□□□□ -1.68
Nup54-201ENSMUST00000038514 Sprr2eO70556 76 aa4.52□□□□□ -1.69
Nup54-201ENSMUST00000038514 Fsip2A2ARZ3 6995 aa4.51□□□□□ -1.69
Nup54-201ENSMUST00000038514 Mt4P47945 62 aa4.48□□□□□ -1.69
Nup54-201ENSMUST00000038514 Gm38119A0A0A6YX29 146 aa4.47□□□□□ -1.69
Nup54-201ENSMUST00000038514 Lce3eF8VQJ0 98 aa4.47□□□□□ -1.69
Nup54-201ENSMUST00000038514 Lce3fQ6PAI4 98 aa4.47□□□□□ -1.69
Nup54-201ENSMUST00000038514 Krtap4-9B1AQA9 244 aa4.47□□□□□ -1.69
Nup54-201ENSMUST00000038514 2300003K06RikA2A4M0 262 aa4.44□□□□□ -1.7
Nup54-201ENSMUST00000038514 Sprr2fO70557 76 aa4.42□□□□□ -1.7
Nup54-201ENSMUST00000038514 Sprr2kO70562 68 aa4.41□□□□□ -1.7
Nup54-201ENSMUST00000038514 Lce3aQ497I5 98 aa4.4□□□□□ -1.71
Nup54-201ENSMUST00000038514 Krtap31-1Q9D644 177 aa4.34□□□□□ -1.71
Nup54-201ENSMUST00000038514 ObscnA2AAJ9 8891 aaKnown RBP4.33□□□□□ -1.72
Nup54-201ENSMUST00000038514 Krtap4-13Q9D7P3 165 aa4.32□□□□□ -1.72
Nup54-201ENSMUST00000038514 Lce1bQ9D149 137 aa4.25□□□□□ -1.73
Nup54-201ENSMUST00000038514 Mt1P02802 61 aaKnown RBP4.18□□□□□ -1.74
Nup54-201ENSMUST00000038514 Krtap4-16Q91W93 202 aa4.11□□□□□ -1.75
Nup54-201ENSMUST00000038514 Lce1lQ9D1G7 135 aa4.1□□□□□ -1.75
Nup54-201ENSMUST00000038514 Krtap6-3A0A087WQL6 57 aa4.05□□□□□ -1.76
Nup54-201ENSMUST00000038514 Lce1kJ3QP15 125 aa4.04□□□□□ -1.76
Nup54-201ENSMUST00000038514 Gm11568A2A4M2 211 aa3.91□□□□□ -1.78
Nup54-201ENSMUST00000038514 Krtap9-1Q64526 186 aa3.91□□□□□ -1.78
Nup54-201ENSMUST00000038514 Krtap20-2E9Q0A8 60 aa3.85□□□□□ -1.79
Nup54-201ENSMUST00000038514 Gm45618A0A1B0GSA0 219 aa3.83□□□□□ -1.8
Nup54-201ENSMUST00000038514 Gm10024A0A0A0MQA4 119 aa3.82□□□□□ -1.8
Nup54-201ENSMUST00000038514 Krtap5-2Q9D5Z7 189 aa3.74□□□□□ -1.81
Nup54-201ENSMUST00000038514 Macf1Q9QXZ0 7354 aaKnown RBP3.71□□□□□ -1.82
Nup54-201ENSMUST00000038514 Gm10153A0A1B0GRL1 320 aa3.7□□□□□ -1.82
Nup54-201ENSMUST00000038514 Mt3P28184 68 aa3.63□□□□□ -1.83
Nup54-201ENSMUST00000038514 Gm11554B1AQB2 190 aa3.55□□□□□ -1.84
Nup54-201ENSMUST00000038514 Gm11559Q9D3H7 191 aa3.54□□□□□ -1.84
Nup54-201ENSMUST00000038514 Krtap31-2Q8CAY5 177 aa3.53□□□□□ -1.84
Nup54-201ENSMUST00000038514 Gm4553A0A1B0GSA9 284 aa3.46□□□□□ -1.86
Nup54-201ENSMUST00000038514 Gm39115A0A1B0GSH7 232 aa3.43□□□□□ -1.86
Nup54-201ENSMUST00000038514 Gm45337A0A1B0GS71 263 aa3.4□□□□□ -1.86
Nup54-201ENSMUST00000038514 Kmt2dQ6PDK2 5588 aa3.4□□□□□ -1.87
Nup54-201ENSMUST00000038514 Hmcn1D3YXG0 5634 aa3.39□□□□□ -1.87
Nup54-201ENSMUST00000038514 Gm2431E9Q8S1 172 aa3.38□□□□□ -1.87
Nup54-201ENSMUST00000038514 Muc16A0A140LJ72 8478 aa3.36□□□□□ -1.87
Nup54-201ENSMUST00000038514 Gm40460A0A1B0GR10 244 aa3.32□□□□□ -1.88
Nup54-201ENSMUST00000038514 Gm7579A0A1B0GRJ4 243 aa3.32□□□□□ -1.88
Nup54-201ENSMUST00000038514 Krtap5-5Q2TA51 241 aa3.32□□□□□ -1.88
Nup54-201ENSMUST00000038514 Krtap5-4Q62220 223 aa3.32□□□□□ -1.88
Nup54-201ENSMUST00000038514 Eppk1Q8R0W0 6548 aa3.26□□□□□ -1.89
Nup54-201ENSMUST00000038514 1110025L11RikO09048 78 aa3.24□□□□□ -1.89
Nup54-201ENSMUST00000038514 Krtap6-5Q925H3 78 aa3.24□□□□□ -1.89
Nup54-201ENSMUST00000038514 Muc19Q6PZE0 7524 aa3.24□□□□□ -1.89
Nup54-201ENSMUST00000038514 Gm29735A0A1B0GT06 219 aa3.15□□□□□ -1.9
Nup54-201ENSMUST00000038514 DstQ91ZU6 7393 aaKnown RBP3.15□□□□□ -1.91
Nup54-201ENSMUST00000038514 Gm11639A0A1D5RLM8 5808 aa3.14□□□□□ -1.91
Nup54-201ENSMUST00000038514 Gm11567Q9D141 195 aa3.04□□□□□ -1.92
Nup54-201ENSMUST00000038514 Sprr2bO70554 98 aa3.04□□□□□ -1.92
Nup54-201ENSMUST00000038514 NebE9Q1W3 7152 aa3.01□□□□□ -1.93
Nup54-201ENSMUST00000038514 Gm10229O08631 77 aa2.85□□□□□ -1.95
Nup54-201ENSMUST00000038514 Gpr98Q8VHN7 6298 aaKnown RBP2.85□□□□□ -1.95
Nup54-201ENSMUST00000038514 AhnakE9Q616 5656 aaKnown RBP2.84□□□□□ -1.95
Nup54-201ENSMUST00000038514 Krtap5-1Q64507 230 aa2.75□□□□□ -1.97
Nup54-201ENSMUST00000038514 Phgr1Q8K0G7 91 aa2.69□□□□□ -1.98
Nup54-201ENSMUST00000038514 Krtap21-1Q925H4 128 aa2.68□□□□□ -1.98
Nup54-201ENSMUST00000038514 Gm4559A4IF42 199 aa2.63□□□□□ -1.99
Nup54-201ENSMUST00000038514 Krtap6-2O08884 159 aa2.36□□□□□ -2.03
Retrieved 80 of 22,080 RNA–protein pairs in 61.6 ms