RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Krtap19-2Q925I0 141 aa1.98□□□□□ -2.09
Rc3h1-201ENSMUST00000035911 Krtap9-5A2A5X3 358 aa1.97□□□□□ -2.09
Rc3h1-201ENSMUST00000035911 Sprr2dO70555 85 aa1.96□□□□□ -2.1
Rc3h1-201ENSMUST00000035911 Gm10100J3QK64 120 aa1.95□□□□□ -2.1
Rc3h1-201ENSMUST00000035911 A0A286YCP9 139 aa1.92□□□□□ -2.1
Rc3h1-201ENSMUST00000035911 Gm10272F7CZ33 110 aa1.92□□□□□ -2.1
Rc3h1-201ENSMUST00000035911 Krtap4-6Q3V4B7 195 aa1.92□□□□□ -2.1
Rc3h1-201ENSMUST00000035911 Sprr2iO70560 76 aa1.92□□□□□ -2.1
Rc3h1-201ENSMUST00000035911 Gm10142J3KMP7 120 aa1.91□□□□□ -2.1
Rc3h1-201ENSMUST00000035911 Krtap6-3A0A087WQL6 57 aa1.89□□□□□ -2.11
Rc3h1-201ENSMUST00000035911 Gm11564A2A4L9 201 aa1.89□□□□□ -2.11
Rc3h1-201ENSMUST00000035911 Gm11595B1AQA7 289 aa1.89□□□□□ -2.11
Rc3h1-201ENSMUST00000035911 Krtap4-8B1AQA8 209 aa1.89□□□□□ -2.11
Rc3h1-201ENSMUST00000035911 Lce1lQ9D1G7 135 aa1.88□□□□□ -2.11
Rc3h1-201ENSMUST00000035911 Mt2P02798 61 aa1.88□□□□□ -2.11
Rc3h1-201ENSMUST00000035911 Lce3bQ9CQM7 98 aa1.88□□□□□ -2.11
Rc3h1-201ENSMUST00000035911 Lce1cQ9D1C5 147 aa1.88□□□□□ -2.11
Rc3h1-201ENSMUST00000035911 Gm6358A0A087WPH4 74 aa1.87□□□□□ -2.11
Rc3h1-201ENSMUST00000035911 Krtap22-2J3QNX6 67 aa1.86□□□□□ -2.11
Rc3h1-201ENSMUST00000035911 Lce3cQ91V05 98 aa1.85□□□□□ -2.11
Rc3h1-201ENSMUST00000035911 Sprr2fO70557 76 aa1.84□□□□□ -2.12
Rc3h1-201ENSMUST00000035911 Lce3dE9Q8V1 98 aa1.83□□□□□ -2.12
Rc3h1-201ENSMUST00000035911 Lce1fB9EJP6 147 aa1.82□□□□□ -2.12
Rc3h1-201ENSMUST00000035911 Krtap19-4Q925H7 84 aa1.82□□□□□ -2.12
Rc3h1-201ENSMUST00000035911 Syne1Q6ZWR6 8799 aa1.81□□□□□ -2.12
Rc3h1-201ENSMUST00000035911 Mdn1A2ANY6 5589 aaKnown RBP1.8□□□□□ -2.12
Rc3h1-201ENSMUST00000035911 Krtap4-9B1AQA9 244 aa1.79□□□□□ -2.12
Rc3h1-201ENSMUST00000035911 Lce3eF8VQJ0 98 aa1.79□□□□□ -2.12
Rc3h1-201ENSMUST00000035911 Lce3fQ6PAI4 98 aa1.79□□□□□ -2.12
Rc3h1-201ENSMUST00000035911 Sprr2eO70556 76 aa1.77□□□□□ -2.13
Rc3h1-201ENSMUST00000035911 Lce3aQ497I5 98 aa1.77□□□□□ -2.13
Rc3h1-201ENSMUST00000035911 Eppk1Q8R0W0 6548 aa1.77□□□□□ -2.13
Rc3h1-201ENSMUST00000035911 Sprr2hO70559 108 aa1.76□□□□□ -2.13
Rc3h1-201ENSMUST00000035911 Krtap9-1Q64526 186 aa1.76□□□□□ -2.13
Rc3h1-201ENSMUST00000035911 Krtap20-2E9Q0A8 60 aa1.75□□□□□ -2.13
Rc3h1-201ENSMUST00000035911 Sprr2kO70562 68 aa1.75□□□□□ -2.13
Rc3h1-201ENSMUST00000035911 Krtap4-16Q91W93 202 aa1.75□□□□□ -2.13
Rc3h1-201ENSMUST00000035911 2300003K06RikA2A4M0 262 aa1.74□□□□□ -2.13
Rc3h1-201ENSMUST00000035911 Krtap4-13Q9D7P3 165 aa1.71□□□□□ -2.14
Rc3h1-201ENSMUST00000035911 Gm45618A0A1B0GSA0 219 aa1.71□□□□□ -2.14
Rc3h1-201ENSMUST00000035911 Mt4P47945 62 aa1.71□□□□□ -2.14
Rc3h1-201ENSMUST00000035911 Gm11568A2A4M2 211 aa1.64□□□□□ -2.15
Rc3h1-201ENSMUST00000035911 Gm11554B1AQB2 190 aa1.63□□□□□ -2.15
Rc3h1-201ENSMUST00000035911 ObscnA2AAJ9 8891 aaKnown RBP1.62□□□□□ -2.15
Rc3h1-201ENSMUST00000035911 Gm2431E9Q8S1 172 aa1.61□□□□□ -2.15
Rc3h1-201ENSMUST00000035911 Gm11639A0A1D5RLM8 5808 aa1.61□□□□□ -2.15
Rc3h1-201ENSMUST00000035911 Fsip2A2ARZ3 6995 aa1.6□□□□□ -2.15
Rc3h1-201ENSMUST00000035911 Muc16A0A140LJ72 8478 aa1.6□□□□□ -2.15
Rc3h1-201ENSMUST00000035911 Gm10024A0A0A0MQA4 119 aa1.59□□□□□ -2.15
Rc3h1-201ENSMUST00000035911 Gm39115A0A1B0GSH7 232 aa1.58□□□□□ -2.16
Rc3h1-201ENSMUST00000035911 Gm29735A0A1B0GT06 219 aa1.58□□□□□ -2.16
Rc3h1-201ENSMUST00000035911 Krtap5-2Q9D5Z7 189 aa1.57□□□□□ -2.16
Rc3h1-201ENSMUST00000035911 Gpr98Q8VHN7 6298 aaKnown RBP1.55□□□□□ -2.16
Rc3h1-201ENSMUST00000035911 Gm4553A0A1B0GSA9 284 aa1.54□□□□□ -2.16
Rc3h1-201ENSMUST00000035911 DstQ91ZU6 7393 aaKnown RBP1.52□□□□□ -2.17
Rc3h1-201ENSMUST00000035911 Kmt2dQ6PDK2 5588 aa1.51□□□□□ -2.17
Rc3h1-201ENSMUST00000035911 Gm11567Q9D141 195 aa1.5□□□□□ -2.17
Rc3h1-201ENSMUST00000035911 Lce1kJ3QP15 125 aa1.49□□□□□ -2.17
Rc3h1-201ENSMUST00000035911 Mt3P28184 68 aa1.49□□□□□ -2.17
Rc3h1-201ENSMUST00000035911 Gm45337A0A1B0GS71 263 aa1.47□□□□□ -2.17
Rc3h1-201ENSMUST00000035911 Gm40460A0A1B0GR10 244 aa1.43□□□□□ -2.18
Rc3h1-201ENSMUST00000035911 Gm7579A0A1B0GRJ4 243 aa1.43□□□□□ -2.18
Rc3h1-201ENSMUST00000035911 Krtap5-5Q2TA51 241 aa1.43□□□□□ -2.18
Rc3h1-201ENSMUST00000035911 Krtap5-4Q62220 223 aa1.43□□□□□ -2.18
Rc3h1-201ENSMUST00000035911 Gm10153A0A1B0GRL1 320 aa1.41□□□□□ -2.18
Rc3h1-201ENSMUST00000035911 Mt1P02802 61 aaKnown RBP1.4□□□□□ -2.19
Rc3h1-201ENSMUST00000035911 Hmcn1D3YXG0 5634 aa1.36□□□□□ -2.19
Rc3h1-201ENSMUST00000035911 AhnakE9Q616 5656 aaKnown RBP1.34□□□□□ -2.2
Rc3h1-201ENSMUST00000035911 Muc19Q6PZE0 7524 aa1.3□□□□□ -2.2
Rc3h1-201ENSMUST00000035911 Macf1Q9QXZ0 7354 aaKnown RBP1.29□□□□□ -2.2
Rc3h1-201ENSMUST00000035911 NebE9Q1W3 7152 aa1.18□□□□□ -2.22
Rc3h1-201ENSMUST00000035911 Sprr2bO70554 98 aa1.16□□□□□ -2.22
Rc3h1-201ENSMUST00000035911 1110025L11RikO09048 78 aa1.14□□□□□ -2.23
Rc3h1-201ENSMUST00000035911 Krtap6-5Q925H3 78 aa1.14□□□□□ -2.23
Rc3h1-201ENSMUST00000035911 Gm4559A4IF42 199 aa1.11□□□□□ -2.23
Rc3h1-201ENSMUST00000035911 Krtap5-1Q64507 230 aa1.1□□□□□ -2.23
Rc3h1-201ENSMUST00000035911 Phgr1Q8K0G7 91 aa1.08□□□□□ -2.24
Rc3h1-201ENSMUST00000035911 Gm10229O08631 77 aa1.02□□□□□ -2.25
Rc3h1-201ENSMUST00000035911 Krtap21-1Q925H4 128 aa0.92□□□□□ -2.26
Rc3h1-201ENSMUST00000035911 Krtap6-2O08884 159 aa0.81□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 124.1 ms