RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Gm38119A0A0A6YX29 146 aa4.51□□□□□ -1.69
Usp4-201ENSMUST00000035237 Sprr2fO70557 76 aa4.5□□□□□ -1.69
Usp4-201ENSMUST00000035237 ObscnA2AAJ9 8891 aaKnown RBP4.49□□□□□ -1.69
Usp4-201ENSMUST00000035237 Fsip2A2ARZ3 6995 aa4.47□□□□□ -1.69
Usp4-201ENSMUST00000035237 Krtap4-16Q91W93 202 aa4.47□□□□□ -1.69
Usp4-201ENSMUST00000035237 Sprr2eO70556 76 aa4.4□□□□□ -1.7
Usp4-201ENSMUST00000035237 Krtap4-6Q3V4B7 195 aa4.39□□□□□ -1.71
Usp4-201ENSMUST00000035237 Lce1gQ9D195 139 aa4.36□□□□□ -1.71
Usp4-201ENSMUST00000035237 Sprr2kO70562 68 aa4.32□□□□□ -1.72
Usp4-201ENSMUST00000035237 Syne2Q6ZWQ0 6874 aaKnown RBP4.3□□□□□ -1.72
Usp4-201ENSMUST00000035237 Lce1bQ9D149 137 aa4.3□□□□□ -1.72
Usp4-201ENSMUST00000035237 Lce1lQ9D1G7 135 aa4.3□□□□□ -1.72
Usp4-201ENSMUST00000035237 Mt4P47945 62 aa4.28□□□□□ -1.72
Usp4-201ENSMUST00000035237 Krtap4-1Q3UUY3 169 aa4.23□□□□□ -1.73
Usp4-201ENSMUST00000035237 2300003K06RikA2A4M0 262 aa4.22□□□□□ -1.73
Usp4-201ENSMUST00000035237 Gm10024A0A0A0MQA4 119 aa4.15□□□□□ -1.75
Usp4-201ENSMUST00000035237 Lce1kJ3QP15 125 aa4.08□□□□□ -1.76
Usp4-201ENSMUST00000035237 Krtap4-9B1AQA9 244 aa4.06□□□□□ -1.76
Usp4-201ENSMUST00000035237 Gm11564A2A4L9 201 aa4.05□□□□□ -1.76
Usp4-201ENSMUST00000035237 Gm11563B1AQ90 168 aa4.05□□□□□ -1.76
Usp4-201ENSMUST00000035237 Gm11595B1AQA7 289 aa4.05□□□□□ -1.76
Usp4-201ENSMUST00000035237 Krtap4-8B1AQA8 209 aa4.05□□□□□ -1.76
Usp4-201ENSMUST00000035237 Mt1P02802 61 aaKnown RBP3.98□□□□□ -1.77
Usp4-201ENSMUST00000035237 Krtap4-13Q9D7P3 165 aa3.96□□□□□ -1.78
Usp4-201ENSMUST00000035237 Macf1Q9QXZ0 7354 aaKnown RBP3.96□□□□□ -1.78
Usp4-201ENSMUST00000035237 Krtap4-2B1AQ85 167 aa3.96□□□□□ -1.78
Usp4-201ENSMUST00000035237 Gm11596B1AQB0 205 aa3.95□□□□□ -1.78
Usp4-201ENSMUST00000035237 Krtap4-7Q9D732 168 aa3.85□□□□□ -1.79
Usp4-201ENSMUST00000035237 Gm11555B1AQ89 175 aa3.77□□□□□ -1.81
Usp4-201ENSMUST00000035237 Muc19Q6PZE0 7524 aa3.67□□□□□ -1.82
Usp4-201ENSMUST00000035237 Krtap20-2E9Q0A8 60 aa3.67□□□□□ -1.82
Usp4-201ENSMUST00000035237 Mt3P28184 68 aa3.6□□□□□ -1.83
Usp4-201ENSMUST00000035237 Gm11568A2A4M2 211 aa3.57□□□□□ -1.84
Usp4-201ENSMUST00000035237 Krtap9-1Q64526 186 aa3.57□□□□□ -1.84
Usp4-201ENSMUST00000035237 Krtap31-2Q8CAY5 177 aa3.55□□□□□ -1.84
Usp4-201ENSMUST00000035237 Kmt2dQ6PDK2 5588 aa3.39□□□□□ -1.87
Usp4-201ENSMUST00000035237 Krtap6-3A0A087WQL6 57 aa3.34□□□□□ -1.88
Usp4-201ENSMUST00000035237 Hmcn1D3YXG0 5634 aa3.33□□□□□ -1.88
Usp4-201ENSMUST00000035237 Gm11554B1AQB2 190 aa3.32□□□□□ -1.88
Usp4-201ENSMUST00000035237 DstQ91ZU6 7393 aaKnown RBP3.31□□□□□ -1.88
Usp4-201ENSMUST00000035237 Krtap5-2Q9D5Z7 189 aa3.18□□□□□ -1.9
Usp4-201ENSMUST00000035237 A0A1Y7VJH8 109 aa3.16□□□□□ -1.9
Usp4-201ENSMUST00000035237 1110025L11RikO09048 78 aa3.16□□□□□ -1.9
Usp4-201ENSMUST00000035237 Krtap6-5Q925H3 78 aa3.16□□□□□ -1.9
Usp4-201ENSMUST00000035237 Gm10153A0A1B0GRL1 320 aa3.14□□□□□ -1.91
Usp4-201ENSMUST00000035237 A0A1Y7VLE6 161 aa3.09□□□□□ -1.92
Usp4-201ENSMUST00000035237 NebE9Q1W3 7152 aa3□□□□□ -1.93
Usp4-201ENSMUST00000035237 Sprr2bO70554 98 aa2.98□□□□□ -1.93
Usp4-201ENSMUST00000035237 Gm11559Q9D3H7 191 aa2.96□□□□□ -1.94
Usp4-201ENSMUST00000035237 Gm4553A0A1B0GSA9 284 aa2.85□□□□□ -1.95
Usp4-201ENSMUST00000035237 Gm2431E9Q8S1 172 aa2.83□□□□□ -1.96
Usp4-201ENSMUST00000035237 Gm10229O08631 77 aa2.82□□□□□ -1.96
Usp4-201ENSMUST00000035237 Phgr1Q8K0G7 91 aa2.8□□□□□ -1.96
Usp4-201ENSMUST00000035237 Gm45337A0A1B0GS71 263 aa2.79□□□□□ -1.96
Usp4-201ENSMUST00000035237 Gm11639A0A1D5RLM8 5808 aa2.78□□□□□ -1.96
Usp4-201ENSMUST00000035237 Gm40460A0A1B0GR10 244 aa2.7□□□□□ -1.98
Usp4-201ENSMUST00000035237 Gm7579A0A1B0GRJ4 243 aa2.7□□□□□ -1.98
Usp4-201ENSMUST00000035237 Krtap5-5Q2TA51 241 aa2.7□□□□□ -1.98
Usp4-201ENSMUST00000035237 Krtap5-4Q62220 223 aa2.7□□□□□ -1.98
Usp4-201ENSMUST00000035237 AhnakE9Q616 5656 aaKnown RBP2.63□□□□□ -1.99
Usp4-201ENSMUST00000035237 Krtap21-1Q925H4 128 aa2.53□□□□□ -2.01
Usp4-201ENSMUST00000035237 Gm11567Q9D141 195 aa2.45□□□□□ -2.02
Usp4-201ENSMUST00000035237 Gm39115A0A1B0GSH7 232 aa2.38□□□□□ -2.03
Usp4-201ENSMUST00000035237 Eppk1Q8R0W0 6548 aa2.37□□□□□ -2.03
Usp4-201ENSMUST00000035237 Krtap6-2O08884 159 aa2.32□□□□□ -2.04
Usp4-201ENSMUST00000035237 Gpr98Q8VHN7 6298 aaKnown RBP2.32□□□□□ -2.04
Usp4-201ENSMUST00000035237 A0A286YCP9 139 aa2.23□□□□□ -2.05
Usp4-201ENSMUST00000035237 A0A1Y7VJ07 166 aa2.22□□□□□ -2.05
Usp4-201ENSMUST00000035237 A030005L19RikA0A1Y7VIU2 113 aa2.22□□□□□ -2.05
Usp4-201ENSMUST00000035237 Gm29735A0A1B0GT06 219 aa2.05□□□□□ -2.08
Usp4-201ENSMUST00000035237 Gm45618A0A1B0GSA0 219 aa1.85□□□□□ -2.11
Usp4-201ENSMUST00000035237 Krtap28-10A0A1Y7VP58 119 aa1.68□□□□□ -2.14
Usp4-201ENSMUST00000035237 Krtap28-13A0A087WQP5 138 aa1.65□□□□□ -2.15
Usp4-201ENSMUST00000035237 A030005K14RikA0A1Y7VNY1 122 aa1.62□□□□□ -2.15
Usp4-201ENSMUST00000035237 A030014E15RikA0A1Y7VJV2 120 aa1.49□□□□□ -2.17
Usp4-201ENSMUST00000035237 Gm7544A0A1Y7VJ58 118 aa1.47□□□□□ -2.17
Usp4-201ENSMUST00000035237 A030003K21RikA0A1Y7VIM3 128 aa1.24□□□□□ -2.21
Usp4-201ENSMUST00000035237 Krtap5-1Q64507 230 aa1.22□□□□□ -2.21
Usp4-201ENSMUST00000035237 Gm4559A4IF42 199 aa1.18□□□□□ -2.22
Usp4-201ENSMUST00000035237 Gm6217A0A1Y7VJK9 128 aa1.17□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 106.7 ms