RNA–Protein interactions for RNA: ENSMUST00000029812.13

Nfkb1-201, Transcript of Nuclear factor NF-kappa-B p105 subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nfkb1, Length 4,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1-201ENSMUST00000029812 Lce1eQ9D139 143 aa4.79□□□□□ -1.64
Nfkb1-201ENSMUST00000029812 Sprr2iO70560 76 aa4.78□□□□□ -1.64
Nfkb1-201ENSMUST00000029812 Krtap19-4Q925H7 84 aa4.72□□□□□ -1.65
Nfkb1-201ENSMUST00000029812 Gm11938Q9D3H4 131 aa4.71□□□□□ -1.65
Nfkb1-201ENSMUST00000029812 Muc5bE9Q5I3 4800 aa4.7□□□□□ -1.66
Nfkb1-201ENSMUST00000029812 Krtap31-1Q9D644 177 aa4.69□□□□□ -1.66
Nfkb1-201ENSMUST00000029812 ObscnA2AAJ9 8891 aaKnown RBP4.69□□□□□ -1.66
Nfkb1-201ENSMUST00000029812 Krtap4-2B1AQ85 167 aa4.68□□□□□ -1.66
Nfkb1-201ENSMUST00000029812 Krtap4-1Q3UUY3 169 aa4.66□□□□□ -1.66
Nfkb1-201ENSMUST00000029812 A0A1Y7VLE6 161 aa4.59□□□□□ -1.67
Nfkb1-201ENSMUST00000029812 Gm10024A0A0A0MQA4 119 aa4.58□□□□□ -1.68
Nfkb1-201ENSMUST00000029812 Sprr2dO70555 85 aa4.58□□□□□ -1.68
Nfkb1-201ENSMUST00000029812 Krtap4-9B1AQA9 244 aa4.56□□□□□ -1.68
Nfkb1-201ENSMUST00000029812 A0A1Y7VJH8 109 aa4.54□□□□□ -1.68
Nfkb1-201ENSMUST00000029812 Gm11564A2A4L9 201 aa4.51□□□□□ -1.69
Nfkb1-201ENSMUST00000029812 Gm11563B1AQ90 168 aa4.51□□□□□ -1.69
Nfkb1-201ENSMUST00000029812 Gm11595B1AQA7 289 aa4.51□□□□□ -1.69
Nfkb1-201ENSMUST00000029812 Krtap4-8B1AQA8 209 aa4.51□□□□□ -1.69
Nfkb1-201ENSMUST00000029812 Sprr2eO70556 76 aa4.5□□□□□ -1.69
Nfkb1-201ENSMUST00000029812 2300003K06RikA2A4M0 262 aa4.49□□□□□ -1.69
Nfkb1-201ENSMUST00000029812 Lce1a1Q9CQH5 143 aa4.47□□□□□ -1.69
Nfkb1-201ENSMUST00000029812 Krtap4-13Q9D7P3 165 aa4.46□□□□□ -1.7
Nfkb1-201ENSMUST00000029812 Gm11596B1AQB0 205 aa4.46□□□□□ -1.7
Nfkb1-201ENSMUST00000029812 Gm11562A0PK51 136 aa4.44□□□□□ -1.7
Nfkb1-201ENSMUST00000029812 Muc19Q6PZE0 7524 aa4.42□□□□□ -1.7
Nfkb1-201ENSMUST00000029812 Krtap28-10A0A1Y7VP58 119 aa4.42□□□□□ -1.7
Nfkb1-201ENSMUST00000029812 Krtap4-16Q91W93 202 aa4.42□□□□□ -1.7
Nfkb1-201ENSMUST00000029812 Lce1kJ3QP15 125 aa4.41□□□□□ -1.7
Nfkb1-201ENSMUST00000029812 Krtap31-2Q8CAY5 177 aa4.38□□□□□ -1.71
Nfkb1-201ENSMUST00000029812 Krtap4-7Q9D732 168 aa4.38□□□□□ -1.71
Nfkb1-201ENSMUST00000029812 Sprr2hO70559 108 aa4.28□□□□□ -1.72
Nfkb1-201ENSMUST00000029812 Sprr2fO70557 76 aa4.25□□□□□ -1.73
Nfkb1-201ENSMUST00000029812 A030005L19RikA0A1Y7VIU2 113 aa4.19□□□□□ -1.74
Nfkb1-201ENSMUST00000029812 Krtap28-13A0A087WQP5 138 aa4.17□□□□□ -1.74
Nfkb1-201ENSMUST00000029812 DstQ91ZU6 7393 aaKnown RBP4.14□□□□□ -1.75
Nfkb1-201ENSMUST00000029812 Gm7544A0A1Y7VJ58 118 aa4.13□□□□□ -1.75
Nfkb1-201ENSMUST00000029812 A030005K14RikA0A1Y7VNY1 122 aa4.08□□□□□ -1.76
Nfkb1-201ENSMUST00000029812 A030003K21RikA0A1Y7VIM3 128 aa4.06□□□□□ -1.76
Nfkb1-201ENSMUST00000029812 NebE9Q1W3 7152 aa3.97□□□□□ -1.77
Nfkb1-201ENSMUST00000029812 Krtap20-2E9Q0A8 60 aa3.96□□□□□ -1.78
Nfkb1-201ENSMUST00000029812 Gm11554B1AQB2 190 aa3.93□□□□□ -1.78
Nfkb1-201ENSMUST00000029812 Mt3P28184 68 aa3.91□□□□□ -1.78
Nfkb1-201ENSMUST00000029812 Mt1P02802 61 aaKnown RBP3.91□□□□□ -1.78
Nfkb1-201ENSMUST00000029812 Gm6217A0A1Y7VJK9 128 aa3.78□□□□□ -1.8
Nfkb1-201ENSMUST00000029812 A0A1Y7VJ07 166 aa3.76□□□□□ -1.81
Nfkb1-201ENSMUST00000029812 Gm11555B1AQ89 175 aa3.75□□□□□ -1.81
Nfkb1-201ENSMUST00000029812 Kmt2dQ6PDK2 5588 aa3.69□□□□□ -1.82
Nfkb1-201ENSMUST00000029812 Krtap6-3A0A087WQL6 57 aa3.67□□□□□ -1.82
Nfkb1-201ENSMUST00000029812 A030014E15RikA0A1Y7VJV2 120 aa3.44□□□□□ -1.86
Nfkb1-201ENSMUST00000029812 Gm11568A2A4M2 211 aa3.37□□□□□ -1.87
Nfkb1-201ENSMUST00000029812 Krtap9-1Q64526 186 aa3.37□□□□□ -1.87
Nfkb1-201ENSMUST00000029812 Hmcn1D3YXG0 5634 aa3.35□□□□□ -1.87
Nfkb1-201ENSMUST00000029812 Sprr2bO70554 98 aa3.26□□□□□ -1.89
Nfkb1-201ENSMUST00000029812 1110025L11RikO09048 78 aa3.17□□□□□ -1.9
Nfkb1-201ENSMUST00000029812 Krtap6-5Q925H3 78 aa3.17□□□□□ -1.9
Nfkb1-201ENSMUST00000029812 Gm11639A0A1D5RLM8 5808 aa3.11□□□□□ -1.91
Nfkb1-201ENSMUST00000029812 Gpr98Q8VHN7 6298 aaKnown RBP3.11□□□□□ -1.91
Nfkb1-201ENSMUST00000029812 Eppk1Q8R0W0 6548 aa3.08□□□□□ -1.92
Nfkb1-201ENSMUST00000029812 Gm11559Q9D3H7 191 aa3.06□□□□□ -1.92
Nfkb1-201ENSMUST00000029812 A0A286YCP9 139 aa3.06□□□□□ -1.92
Nfkb1-201ENSMUST00000029812 Krtap5-2Q9D5Z7 189 aa3.04□□□□□ -1.92
Nfkb1-201ENSMUST00000029812 Gm10229O08631 77 aa2.92□□□□□ -1.94
Nfkb1-201ENSMUST00000029812 Gm10153A0A1B0GRL1 320 aa2.87□□□□□ -1.95
Nfkb1-201ENSMUST00000029812 Phgr1Q8K0G7 91 aa2.83□□□□□ -1.96
Nfkb1-201ENSMUST00000029812 Gm4553A0A1B0GSA9 284 aa2.79□□□□□ -1.96
Nfkb1-201ENSMUST00000029812 Gm2431E9Q8S1 172 aa2.72□□□□□ -1.97
Nfkb1-201ENSMUST00000029812 Gm45337A0A1B0GS71 263 aa2.68□□□□□ -1.98
Nfkb1-201ENSMUST00000029812 AhnakE9Q616 5656 aaKnown RBP2.66□□□□□ -1.98
Nfkb1-201ENSMUST00000029812 Gm40460A0A1B0GR10 244 aa2.6□□□□□ -1.99
Nfkb1-201ENSMUST00000029812 Gm7579A0A1B0GRJ4 243 aa2.6□□□□□ -1.99
Nfkb1-201ENSMUST00000029812 Krtap5-5Q2TA51 241 aa2.6□□□□□ -1.99
Nfkb1-201ENSMUST00000029812 Krtap5-4Q62220 223 aa2.6□□□□□ -1.99
Nfkb1-201ENSMUST00000029812 Krtap6-2O08884 159 aa2.41□□□□□ -2.02
Nfkb1-201ENSMUST00000029812 Gm39115A0A1B0GSH7 232 aa2.37□□□□□ -2.03
Nfkb1-201ENSMUST00000029812 Krtap21-1Q925H4 128 aa2.37□□□□□ -2.03
Nfkb1-201ENSMUST00000029812 Gm11567Q9D141 195 aa2.25□□□□□ -2.05
Nfkb1-201ENSMUST00000029812 Gm45618A0A1B0GSA0 219 aa2.14□□□□□ -2.07
Nfkb1-201ENSMUST00000029812 Gm29735A0A1B0GT06 219 aa1.96□□□□□ -2.1
Nfkb1-201ENSMUST00000029812 Krtap5-1Q64507 230 aa1.52□□□□□ -2.17
Nfkb1-201ENSMUST00000029812 Gm4559A4IF42 199 aa1.35□□□□□ -2.19
Retrieved 80 of 22,080 RNA–protein pairs in 65.8 ms