RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 A0A1Y7VLE6 161 aa4.55□□□□□ -1.68
Prpf38b-201ENSMUST00000029480 Gm10272F7CZ33 110 aa4.55□□□□□ -1.68
Prpf38b-201ENSMUST00000029480 Krtap19-4Q925H7 84 aa4.52□□□□□ -1.69
Prpf38b-201ENSMUST00000029480 Lce1bQ9D149 137 aa4.51□□□□□ -1.69
Prpf38b-201ENSMUST00000029480 Krtap4-9B1AQA9 244 aa4.5□□□□□ -1.69
Prpf38b-201ENSMUST00000029480 Mt4P47945 62 aa4.46□□□□□ -1.69
Prpf38b-201ENSMUST00000029480 Fsip2A2ARZ3 6995 aa4.42□□□□□ -1.7
Prpf38b-201ENSMUST00000029480 A030005K14RikA0A1Y7VNY1 122 aa4.39□□□□□ -1.71
Prpf38b-201ENSMUST00000029480 Sprr2fO70557 76 aa4.36□□□□□ -1.71
Prpf38b-201ENSMUST00000029480 Lce1cQ9D1C5 147 aa4.35□□□□□ -1.71
Prpf38b-201ENSMUST00000029480 Krtap28-13A0A087WQP5 138 aa4.35□□□□□ -1.71
Prpf38b-201ENSMUST00000029480 Krtap4-13Q9D7P3 165 aa4.32□□□□□ -1.72
Prpf38b-201ENSMUST00000029480 Gm38119A0A0A6YX29 146 aa4.29□□□□□ -1.72
Prpf38b-201ENSMUST00000029480 Sprr2kO70562 68 aa4.29□□□□□ -1.72
Prpf38b-201ENSMUST00000029480 2300003K06RikA2A4M0 262 aa4.27□□□□□ -1.73
Prpf38b-201ENSMUST00000029480 Krtap6-3A0A087WQL6 57 aa4.24□□□□□ -1.73
Prpf38b-201ENSMUST00000029480 Syne1Q6ZWR6 8799 aa4.23□□□□□ -1.73
Prpf38b-201ENSMUST00000029480 Lce1fB9EJP6 147 aa4.19□□□□□ -1.74
Prpf38b-201ENSMUST00000029480 Lce1a1Q9CQH5 143 aa4.19□□□□□ -1.74
Prpf38b-201ENSMUST00000029480 Gm10100J3QK64 120 aa4.18□□□□□ -1.74
Prpf38b-201ENSMUST00000029480 Sprr2eO70556 76 aa4.16□□□□□ -1.74
Prpf38b-201ENSMUST00000029480 Lce3bQ9CQM7 98 aa4.16□□□□□ -1.74
Prpf38b-201ENSMUST00000029480 Krtap4-7Q9D732 168 aa4.15□□□□□ -1.74
Prpf38b-201ENSMUST00000029480 Gm10142J3KMP7 120 aa4.08□□□□□ -1.76
Prpf38b-201ENSMUST00000029480 Sprr2hO70559 108 aa4.08□□□□□ -1.76
Prpf38b-201ENSMUST00000029480 Lce1lQ9D1G7 135 aa4.06□□□□□ -1.76
Prpf38b-201ENSMUST00000029480 Gm10024A0A0A0MQA4 119 aa4□□□□□ -1.77
Prpf38b-201ENSMUST00000029480 A030003K21RikA0A1Y7VIM3 128 aa3.99□□□□□ -1.77
Prpf38b-201ENSMUST00000029480 Gm6217A0A1Y7VJK9 128 aa3.99□□□□□ -1.77
Prpf38b-201ENSMUST00000029480 Lce3cQ91V05 98 aa3.99□□□□□ -1.77
Prpf38b-201ENSMUST00000029480 Krtap5-2Q9D5Z7 189 aa3.99□□□□□ -1.77
Prpf38b-201ENSMUST00000029480 Krtap4-16Q91W93 202 aa3.98□□□□□ -1.77
Prpf38b-201ENSMUST00000029480 Lce3dE9Q8V1 98 aa3.95□□□□□ -1.78
Prpf38b-201ENSMUST00000029480 A0A286YCP9 139 aa3.93□□□□□ -1.78
Prpf38b-201ENSMUST00000029480 Lce1kJ3QP15 125 aa3.93□□□□□ -1.78
Prpf38b-201ENSMUST00000029480 Krtap20-2E9Q0A8 60 aa3.91□□□□□ -1.78
Prpf38b-201ENSMUST00000029480 Lce3eF8VQJ0 98 aa3.88□□□□□ -1.79
Prpf38b-201ENSMUST00000029480 Lce3fQ6PAI4 98 aa3.88□□□□□ -1.79
Prpf38b-201ENSMUST00000029480 Gm11568A2A4M2 211 aa3.87□□□□□ -1.79
Prpf38b-201ENSMUST00000029480 Krtap9-1Q64526 186 aa3.87□□□□□ -1.79
Prpf38b-201ENSMUST00000029480 ObscnA2AAJ9 8891 aaKnown RBP3.85□□□□□ -1.79
Prpf38b-201ENSMUST00000029480 Mt1P02802 61 aaKnown RBP3.82□□□□□ -1.8
Prpf38b-201ENSMUST00000029480 Lce3aQ497I5 98 aa3.78□□□□□ -1.8
Prpf38b-201ENSMUST00000029480 Gm4553A0A1B0GSA9 284 aa3.73□□□□□ -1.81
Prpf38b-201ENSMUST00000029480 Gm11559Q9D3H7 191 aa3.72□□□□□ -1.81
Prpf38b-201ENSMUST00000029480 Macf1Q9QXZ0 7354 aaKnown RBP3.71□□□□□ -1.81
Prpf38b-201ENSMUST00000029480 Gm10153A0A1B0GRL1 320 aa3.69□□□□□ -1.82
Prpf38b-201ENSMUST00000029480 Gm45337A0A1B0GS71 263 aa3.67□□□□□ -1.82
Prpf38b-201ENSMUST00000029480 A0A1Y7VJ07 166 aa3.65□□□□□ -1.82
Prpf38b-201ENSMUST00000029480 Muc16A0A140LJ72 8478 aa3.61□□□□□ -1.83
Prpf38b-201ENSMUST00000029480 Gm2431E9Q8S1 172 aa3.59□□□□□ -1.84
Prpf38b-201ENSMUST00000029480 Gm40460A0A1B0GR10 244 aa3.57□□□□□ -1.84
Prpf38b-201ENSMUST00000029480 Gm7579A0A1B0GRJ4 243 aa3.57□□□□□ -1.84
Prpf38b-201ENSMUST00000029480 Krtap5-5Q2TA51 241 aa3.57□□□□□ -1.84
Prpf38b-201ENSMUST00000029480 Krtap5-4Q62220 223 aa3.57□□□□□ -1.84
Prpf38b-201ENSMUST00000029480 Gm11554B1AQB2 190 aa3.49□□□□□ -1.85
Prpf38b-201ENSMUST00000029480 Mt3P28184 68 aa3.45□□□□□ -1.86
Prpf38b-201ENSMUST00000029480 Kmt2dQ6PDK2 5588 aa3.44□□□□□ -1.86
Prpf38b-201ENSMUST00000029480 A030014E15RikA0A1Y7VJV2 120 aa3.41□□□□□ -1.86
Prpf38b-201ENSMUST00000029480 Gm39115A0A1B0GSH7 232 aa3.39□□□□□ -1.87
Prpf38b-201ENSMUST00000029480 Hmcn1D3YXG0 5634 aa3.34□□□□□ -1.87
Prpf38b-201ENSMUST00000029480 Eppk1Q8R0W0 6548 aa3.33□□□□□ -1.88
Prpf38b-201ENSMUST00000029480 Muc19Q6PZE0 7524 aa3.15□□□□□ -1.9
Prpf38b-201ENSMUST00000029480 Sprr2bO70554 98 aa3.11□□□□□ -1.91
Prpf38b-201ENSMUST00000029480 DstQ91ZU6 7393 aaKnown RBP3.09□□□□□ -1.91
Prpf38b-201ENSMUST00000029480 Gm45618A0A1B0GSA0 219 aa3.05□□□□□ -1.92
Prpf38b-201ENSMUST00000029480 Gm11639A0A1D5RLM8 5808 aa3.01□□□□□ -1.93
Prpf38b-201ENSMUST00000029480 1110025L11RikO09048 78 aa2.98□□□□□ -1.93
Prpf38b-201ENSMUST00000029480 Krtap6-5Q925H3 78 aa2.98□□□□□ -1.93
Prpf38b-201ENSMUST00000029480 AhnakE9Q616 5656 aaKnown RBP2.92□□□□□ -1.94
Prpf38b-201ENSMUST00000029480 NebE9Q1W3 7152 aa2.9□□□□□ -1.94
Prpf38b-201ENSMUST00000029480 Gpr98Q8VHN7 6298 aaKnown RBP2.78□□□□□ -1.96
Prpf38b-201ENSMUST00000029480 Gm29735A0A1B0GT06 219 aa2.68□□□□□ -1.98
Prpf38b-201ENSMUST00000029480 Gm10229O08631 77 aa2.61□□□□□ -1.99
Prpf38b-201ENSMUST00000029480 Gm11567Q9D141 195 aa2.52□□□□□ -2.01
Prpf38b-201ENSMUST00000029480 Krtap21-1Q925H4 128 aa2.48□□□□□ -2.01
Prpf38b-201ENSMUST00000029480 Phgr1Q8K0G7 91 aa2.38□□□□□ -2.03
Prpf38b-201ENSMUST00000029480 Krtap6-2O08884 159 aa2.17□□□□□ -2.06
Prpf38b-201ENSMUST00000029480 Krtap5-1Q64507 230 aa1.88□□□□□ -2.11
Prpf38b-201ENSMUST00000029480 Gm4559A4IF42 199 aa1.76□□□□□ -2.13
Retrieved 80 of 22,080 RNA–protein pairs in 8.4 ms