RNA–Protein interactions for RNA: ENSMUST00000028062.7

Vim-201, Transcript of Vimentin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Vim, Length 2,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vim-201ENSMUST00000028062 Gm6217A0A1Y7VJK9 128 aa5.42□□□□□ -1.54
Vim-201ENSMUST00000028062 A0A286YCP9 139 aa5.33□□□□□ -1.56
Vim-201ENSMUST00000028062 Krtap19-4Q925H7 84 aa5.29□□□□□ -1.56
Vim-201ENSMUST00000028062 Gm11564A2A4L9 201 aa5.29□□□□□ -1.56
Vim-201ENSMUST00000028062 Gm11563B1AQ90 168 aa5.29□□□□□ -1.56
Vim-201ENSMUST00000028062 Gm11595B1AQA7 289 aa5.29□□□□□ -1.56
Vim-201ENSMUST00000028062 Krtap4-8B1AQA8 209 aa5.29□□□□□ -1.56
Vim-201ENSMUST00000028062 Lce1cQ9D1C5 147 aa5.29□□□□□ -1.56
Vim-201ENSMUST00000028062 Lce3bQ9CQM7 98 aa5.16□□□□□ -1.58
Vim-201ENSMUST00000028062 Syne1Q6ZWR6 8799 aa5.15□□□□□ -1.59
Vim-201ENSMUST00000028062 Krtap4-9B1AQA9 244 aa5.14□□□□□ -1.59
Vim-201ENSMUST00000028062 Gm10100J3QK64 120 aa5.12□□□□□ -1.59
Vim-201ENSMUST00000028062 Mt4P47945 62 aa5.09□□□□□ -1.59
Vim-201ENSMUST00000028062 Lce1bQ9D149 137 aa5.08□□□□□ -1.6
Vim-201ENSMUST00000028062 Lce1fB9EJP6 147 aa5.08□□□□□ -1.6
Vim-201ENSMUST00000028062 Lce1a1Q9CQH5 143 aa5.08□□□□□ -1.6
Vim-201ENSMUST00000028062 Gm10142J3KMP7 120 aa5.01□□□□□ -1.61
Vim-201ENSMUST00000028062 Krtap4-7Q9D732 168 aa5.01□□□□□ -1.61
Vim-201ENSMUST00000028062 Gm38119A0A0A6YX29 146 aa5□□□□□ -1.61
Vim-201ENSMUST00000028062 Fsip2A2ARZ3 6995 aa4.97□□□□□ -1.61
Vim-201ENSMUST00000028062 Krtap4-13Q9D7P3 165 aa4.95□□□□□ -1.62
Vim-201ENSMUST00000028062 Lce3cQ91V05 98 aa4.93□□□□□ -1.62
Vim-201ENSMUST00000028062 Lce3eF8VQJ0 98 aa4.91□□□□□ -1.62
Vim-201ENSMUST00000028062 Lce3fQ6PAI4 98 aa4.91□□□□□ -1.62
Vim-201ENSMUST00000028062 Sprr2hO70559 108 aa4.89□□□□□ -1.63
Vim-201ENSMUST00000028062 Lce3dE9Q8V1 98 aa4.85□□□□□ -1.63
Vim-201ENSMUST00000028062 Sprr2kO70562 68 aa4.84□□□□□ -1.64
Vim-201ENSMUST00000028062 2300003K06RikA2A4M0 262 aa4.82□□□□□ -1.64
Vim-201ENSMUST00000028062 Krtap6-3A0A087WQL6 57 aa4.82□□□□□ -1.64
Vim-201ENSMUST00000028062 ObscnA2AAJ9 8891 aaKnown RBP4.77□□□□□ -1.65
Vim-201ENSMUST00000028062 Sprr2iO70560 76 aa4.77□□□□□ -1.65
Vim-201ENSMUST00000028062 Sprr2eO70556 76 aa4.74□□□□□ -1.65
Vim-201ENSMUST00000028062 Mt1P02802 61 aaKnown RBP4.74□□□□□ -1.65
Vim-201ENSMUST00000028062 Lce1kJ3QP15 125 aa4.7□□□□□ -1.66
Vim-201ENSMUST00000028062 Lce3aQ497I5 98 aa4.7□□□□□ -1.66
Vim-201ENSMUST00000028062 Lce1lQ9D1G7 135 aa4.69□□□□□ -1.66
Vim-201ENSMUST00000028062 Gm11568A2A4M2 211 aa4.55□□□□□ -1.68
Vim-201ENSMUST00000028062 Krtap9-1Q64526 186 aa4.55□□□□□ -1.68
Vim-201ENSMUST00000028062 Sprr2fO70557 76 aa4.54□□□□□ -1.68
Vim-201ENSMUST00000028062 Krtap5-2Q9D5Z7 189 aa4.51□□□□□ -1.69
Vim-201ENSMUST00000028062 Krtap20-2E9Q0A8 60 aa4.47□□□□□ -1.69
Vim-201ENSMUST00000028062 Krtap31-1Q9D644 177 aa4.45□□□□□ -1.7
Vim-201ENSMUST00000028062 Gm10153A0A1B0GRL1 320 aa4.34□□□□□ -1.71
Vim-201ENSMUST00000028062 Mt3P28184 68 aa4.21□□□□□ -1.74
Vim-201ENSMUST00000028062 Gm11559Q9D3H7 191 aa4.17□□□□□ -1.74
Vim-201ENSMUST00000028062 Gm10024A0A0A0MQA4 119 aa4.13□□□□□ -1.75
Vim-201ENSMUST00000028062 Gm45337A0A1B0GS71 263 aa4.13□□□□□ -1.75
Vim-201ENSMUST00000028062 Gm4553A0A1B0GSA9 284 aa4.13□□□□□ -1.75
Vim-201ENSMUST00000028062 Krtap4-16Q91W93 202 aa4.13□□□□□ -1.75
Vim-201ENSMUST00000028062 Gm11554B1AQB2 190 aa4.03□□□□□ -1.76
Vim-201ENSMUST00000028062 Gm40460A0A1B0GR10 244 aa4.02□□□□□ -1.77
Vim-201ENSMUST00000028062 Gm7579A0A1B0GRJ4 243 aa4.02□□□□□ -1.77
Vim-201ENSMUST00000028062 Krtap5-5Q2TA51 241 aa4.02□□□□□ -1.77
Vim-201ENSMUST00000028062 Krtap5-4Q62220 223 aa4.02□□□□□ -1.77
Vim-201ENSMUST00000028062 Macf1Q9QXZ0 7354 aaKnown RBP4□□□□□ -1.77
Vim-201ENSMUST00000028062 Gm2431E9Q8S1 172 aa3.99□□□□□ -1.77
Vim-201ENSMUST00000028062 Eppk1Q8R0W0 6548 aa3.99□□□□□ -1.77
Vim-201ENSMUST00000028062 Gm45618A0A1B0GSA0 219 aa3.96□□□□□ -1.78
Vim-201ENSMUST00000028062 Hmcn1D3YXG0 5634 aa3.96□□□□□ -1.78
Vim-201ENSMUST00000028062 Kmt2dQ6PDK2 5588 aa3.94□□□□□ -1.78
Vim-201ENSMUST00000028062 Gm11639A0A1D5RLM8 5808 aa3.78□□□□□ -1.8
Vim-201ENSMUST00000028062 Gm39115A0A1B0GSH7 232 aa3.73□□□□□ -1.81
Vim-201ENSMUST00000028062 Gpr98Q8VHN7 6298 aaKnown RBP3.71□□□□□ -1.82
Vim-201ENSMUST00000028062 1110025L11RikO09048 78 aa3.63□□□□□ -1.83
Vim-201ENSMUST00000028062 Krtap6-5Q925H3 78 aa3.63□□□□□ -1.83
Vim-201ENSMUST00000028062 Muc19Q6PZE0 7524 aa3.61□□□□□ -1.83
Vim-201ENSMUST00000028062 Muc16A0A140LJ72 8478 aa3.61□□□□□ -1.83
Vim-201ENSMUST00000028062 DstQ91ZU6 7393 aaKnown RBP3.54□□□□□ -1.84
Vim-201ENSMUST00000028062 Gm29735A0A1B0GT06 219 aa3.41□□□□□ -1.86
Vim-201ENSMUST00000028062 Sprr2bO70554 98 aa3.36□□□□□ -1.87
Vim-201ENSMUST00000028062 AhnakE9Q616 5656 aaKnown RBP3.34□□□□□ -1.88
Vim-201ENSMUST00000028062 NebE9Q1W3 7152 aa3.31□□□□□ -1.88
Vim-201ENSMUST00000028062 Krtap31-2Q8CAY5 177 aa3.24□□□□□ -1.89
Vim-201ENSMUST00000028062 Gm11567Q9D141 195 aa3.24□□□□□ -1.89
Vim-201ENSMUST00000028062 Gm10229O08631 77 aa3.21□□□□□ -1.9
Vim-201ENSMUST00000028062 Krtap21-1Q925H4 128 aa3□□□□□ -1.93
Vim-201ENSMUST00000028062 Phgr1Q8K0G7 91 aa2.88□□□□□ -1.95
Vim-201ENSMUST00000028062 Krtap5-1Q64507 230 aa2.75□□□□□ -1.97
Vim-201ENSMUST00000028062 Krtap6-2O08884 159 aa2.71□□□□□ -1.98
Vim-201ENSMUST00000028062 Gm4559A4IF42 199 aa2.65□□□□□ -1.99
Retrieved 80 of 22,080 RNA–protein pairs in 110.3 ms