RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Sprr2dO70555 85 aa4.65□□□□□ -1.67
Col2a1-201ENSMUST00000023123 Sprr2hO70559 108 aa4.64□□□□□ -1.67
Col2a1-201ENSMUST00000023123 Sprr2fO70557 76 aa4.6□□□□□ -1.67
Col2a1-201ENSMUST00000023123 Krtap31-1Q9D644 177 aa4.59□□□□□ -1.68
Col2a1-201ENSMUST00000023123 Hmcn2A2AJ76 5100 aa4.58□□□□□ -1.68
Col2a1-201ENSMUST00000023123 Gm11938Q9D3H4 131 aa4.55□□□□□ -1.68
Col2a1-201ENSMUST00000023123 Krtap4-1Q3UUY3 169 aa4.55□□□□□ -1.68
Col2a1-201ENSMUST00000023123 Muc5bE9Q5I3 4800 aa4.53□□□□□ -1.68
Col2a1-201ENSMUST00000023123 Gm11596B1AQB0 205 aa4.49□□□□□ -1.69
Col2a1-201ENSMUST00000023123 Gm11564A2A4L9 201 aa4.44□□□□□ -1.7
Col2a1-201ENSMUST00000023123 Gm11563B1AQ90 168 aa4.44□□□□□ -1.7
Col2a1-201ENSMUST00000023123 Gm11595B1AQA7 289 aa4.44□□□□□ -1.7
Col2a1-201ENSMUST00000023123 Krtap4-8B1AQA8 209 aa4.44□□□□□ -1.7
Col2a1-201ENSMUST00000023123 Krtap4-9B1AQA9 244 aa4.42□□□□□ -1.7
Col2a1-201ENSMUST00000023123 Gm11562A0PK51 136 aa4.41□□□□□ -1.7
Col2a1-201ENSMUST00000023123 Fsip2A2ARZ3 6995 aa4.41□□□□□ -1.7
Col2a1-201ENSMUST00000023123 2300003K06RikA2A4M0 262 aa4.33□□□□□ -1.72
Col2a1-201ENSMUST00000023123 SspoQ8CG65 4998 aa4.31□□□□□ -1.72
Col2a1-201ENSMUST00000023123 Krtap4-13Q9D7P3 165 aa4.29□□□□□ -1.72
Col2a1-201ENSMUST00000023123 Syne2Q6ZWQ0 6874 aaKnown RBP4.28□□□□□ -1.72
Col2a1-201ENSMUST00000023123 Krtap4-7Q9D732 168 aa4.27□□□□□ -1.73
Col2a1-201ENSMUST00000023123 Krtap4-16Q91W93 202 aa4.19□□□□□ -1.74
Col2a1-201ENSMUST00000023123 Lce1kJ3QP15 125 aa4.14□□□□□ -1.75
Col2a1-201ENSMUST00000023123 Muc16A0A140LJ72 8478 aa4.12□□□□□ -1.75
Col2a1-201ENSMUST00000023123 Mt3P28184 68 aa4.1□□□□□ -1.75
Col2a1-201ENSMUST00000023123 Krtap6-3A0A087WQL6 57 aa3.98□□□□□ -1.77
Col2a1-201ENSMUST00000023123 Mt1P02802 61 aaKnown RBP3.95□□□□□ -1.78
Col2a1-201ENSMUST00000023123 Lce1a1Q9CQH5 143 aa3.93□□□□□ -1.78
Col2a1-201ENSMUST00000023123 ObscnA2AAJ9 8891 aaKnown RBP3.9□□□□□ -1.78
Col2a1-201ENSMUST00000023123 Macf1Q9QXZ0 7354 aaKnown RBP3.79□□□□□ -1.8
Col2a1-201ENSMUST00000023123 Gm11555B1AQ89 175 aa3.78□□□□□ -1.8
Col2a1-201ENSMUST00000023123 Krtap20-2E9Q0A8 60 aa3.77□□□□□ -1.81
Col2a1-201ENSMUST00000023123 Gm11554B1AQB2 190 aa3.76□□□□□ -1.81
Col2a1-201ENSMUST00000023123 Sprr2bO70554 98 aa3.68□□□□□ -1.82
Col2a1-201ENSMUST00000023123 Eppk1Q8R0W0 6548 aa3.67□□□□□ -1.82
Col2a1-201ENSMUST00000023123 Krtap31-2Q8CAY5 177 aa3.5□□□□□ -1.85
Col2a1-201ENSMUST00000023123 DstQ91ZU6 7393 aaKnown RBP3.44□□□□□ -1.86
Col2a1-201ENSMUST00000023123 NebE9Q1W3 7152 aa3.41□□□□□ -1.86
Col2a1-201ENSMUST00000023123 Kmt2dQ6PDK2 5588 aa3.38□□□□□ -1.87
Col2a1-201ENSMUST00000023123 Muc19Q6PZE0 7524 aa3.28□□□□□ -1.88
Col2a1-201ENSMUST00000023123 1110025L11RikO09048 78 aa3.2□□□□□ -1.9
Col2a1-201ENSMUST00000023123 Krtap6-5Q925H3 78 aa3.2□□□□□ -1.9
Col2a1-201ENSMUST00000023123 Gm11568A2A4M2 211 aa3.17□□□□□ -1.9
Col2a1-201ENSMUST00000023123 Krtap9-1Q64526 186 aa3.17□□□□□ -1.9
Col2a1-201ENSMUST00000023123 Gm11559Q9D3H7 191 aa3.12□□□□□ -1.91
Col2a1-201ENSMUST00000023123 Gm10229O08631 77 aa3□□□□□ -1.93
Col2a1-201ENSMUST00000023123 Gpr98Q8VHN7 6298 aaKnown RBP2.98□□□□□ -1.93
Col2a1-201ENSMUST00000023123 Gm11639A0A1D5RLM8 5808 aa2.97□□□□□ -1.93
Col2a1-201ENSMUST00000023123 Krtap5-2Q9D5Z7 189 aa2.93□□□□□ -1.94
Col2a1-201ENSMUST00000023123 Phgr1Q8K0G7 91 aa2.9□□□□□ -1.95
Col2a1-201ENSMUST00000023123 Hmcn1D3YXG0 5634 aa2.87□□□□□ -1.95
Col2a1-201ENSMUST00000023123 Gm4553A0A1B0GSA9 284 aa2.75□□□□□ -1.97
Col2a1-201ENSMUST00000023123 Gm2431E9Q8S1 172 aa2.63□□□□□ -1.99
Col2a1-201ENSMUST00000023123 Gm10153A0A1B0GRL1 320 aa2.56□□□□□ -2
Col2a1-201ENSMUST00000023123 AhnakE9Q616 5656 aaKnown RBP2.54□□□□□ -2
Col2a1-201ENSMUST00000023123 A030005L19RikA0A1Y7VIU2 113 aa2.52□□□□□ -2.01
Col2a1-201ENSMUST00000023123 A030003K21RikA0A1Y7VIM3 128 aa2.48□□□□□ -2.01
Col2a1-201ENSMUST00000023123 A0A1Y7VJH8 109 aa2.48□□□□□ -2.01
Col2a1-201ENSMUST00000023123 Gm45337A0A1B0GS71 263 aa2.46□□□□□ -2.02
Col2a1-201ENSMUST00000023123 A0A1Y7VLE6 161 aa2.45□□□□□ -2.02
Col2a1-201ENSMUST00000023123 Gm40460A0A1B0GR10 244 aa2.41□□□□□ -2.02
Col2a1-201ENSMUST00000023123 Gm7579A0A1B0GRJ4 243 aa2.41□□□□□ -2.02
Col2a1-201ENSMUST00000023123 Krtap5-5Q2TA51 241 aa2.41□□□□□ -2.02
Col2a1-201ENSMUST00000023123 Krtap5-4Q62220 223 aa2.41□□□□□ -2.02
Col2a1-201ENSMUST00000023123 Krtap6-2O08884 159 aa2.4□□□□□ -2.03
Col2a1-201ENSMUST00000023123 Gm6217A0A1Y7VJK9 128 aa2.35□□□□□ -2.03
Col2a1-201ENSMUST00000023123 Krtap21-1Q925H4 128 aa2.28□□□□□ -2.05
Col2a1-201ENSMUST00000023123 Gm39115A0A1B0GSH7 232 aa2.25□□□□□ -2.05
Col2a1-201ENSMUST00000023123 Gm11567Q9D141 195 aa2.23□□□□□ -2.05
Col2a1-201ENSMUST00000023123 Krtap28-10A0A1Y7VP58 119 aa1.98□□□□□ -2.09
Col2a1-201ENSMUST00000023123 Gm45618A0A1B0GSA0 219 aa1.94□□□□□ -2.1
Col2a1-201ENSMUST00000023123 A030005K14RikA0A1Y7VNY1 122 aa1.86□□□□□ -2.11
Col2a1-201ENSMUST00000023123 A0A1Y7VJ07 166 aa1.82□□□□□ -2.12
Col2a1-201ENSMUST00000023123 Gm29735A0A1B0GT06 219 aa1.8□□□□□ -2.12
Col2a1-201ENSMUST00000023123 Krtap28-13A0A087WQP5 138 aa1.79□□□□□ -2.12
Col2a1-201ENSMUST00000023123 Gm7544A0A1Y7VJ58 118 aa1.73□□□□□ -2.13
Col2a1-201ENSMUST00000023123 A030014E15RikA0A1Y7VJV2 120 aa1.7□□□□□ -2.14
Col2a1-201ENSMUST00000023123 A0A286YCP9 139 aa1.5□□□□□ -2.17
Col2a1-201ENSMUST00000023123 Krtap5-1Q64507 230 aa1.4□□□□□ -2.19
Col2a1-201ENSMUST00000023123 Gm4559A4IF42 199 aa0.95□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 293.2 ms