RNA–Protein interactions for RNA: ENSMUST00000021594.4

Tdp1-201, Transcript of Tyrosyl-DNA phosphodiesterase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tdp1, Length 2,019 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1-201ENSMUST00000021594 Krtap19-4Q925H7 84 aa3.37□□□□□ -1.87
Tdp1-201ENSMUST00000021594 Krtap4-2B1AQ85 167 aa3.34□□□□□ -1.88
Tdp1-201ENSMUST00000021594 Krtap4-6Q3V4B7 195 aa3.32□□□□□ -1.88
Tdp1-201ENSMUST00000021594 Lce1cQ9D1C5 147 aa3.32□□□□□ -1.88
Tdp1-201ENSMUST00000021594 Syne2Q6ZWQ0 6874 aaKnown RBP3.3□□□□□ -1.88
Tdp1-201ENSMUST00000021594 Lce1gQ9D195 139 aa3.3□□□□□ -1.88
Tdp1-201ENSMUST00000021594 Lce3bQ9CQM7 98 aa3.27□□□□□ -1.89
Tdp1-201ENSMUST00000021594 Gm10100J3QK64 120 aa3.26□□□□□ -1.89
Tdp1-201ENSMUST00000021594 Gm11596B1AQB0 205 aa3.22□□□□□ -1.89
Tdp1-201ENSMUST00000021594 Gm10142J3KMP7 120 aa3.21□□□□□ -1.9
Tdp1-201ENSMUST00000021594 Lce1fB9EJP6 147 aa3.19□□□□□ -1.9
Tdp1-201ENSMUST00000021594 Lce1a1Q9CQH5 143 aa3.19□□□□□ -1.9
Tdp1-201ENSMUST00000021594 Syne1Q6ZWR6 8799 aa3.18□□□□□ -1.9
Tdp1-201ENSMUST00000021594 Gm11564A2A4L9 201 aa3.15□□□□□ -1.91
Tdp1-201ENSMUST00000021594 Gm11595B1AQA7 289 aa3.15□□□□□ -1.91
Tdp1-201ENSMUST00000021594 Krtap4-8B1AQA8 209 aa3.15□□□□□ -1.91
Tdp1-201ENSMUST00000021594 Fsip2A2ARZ3 6995 aa3.13□□□□□ -1.91
Tdp1-201ENSMUST00000021594 Sprr2iO70560 76 aa3.13□□□□□ -1.91
Tdp1-201ENSMUST00000021594 Sprr2hO70559 108 aa3.12□□□□□ -1.91
Tdp1-201ENSMUST00000021594 Gm39115A0A1B0GSH7 232 aa3.11□□□□□ -1.91
Tdp1-201ENSMUST00000021594 Lce3cQ91V05 98 aa3.11□□□□□ -1.91
Tdp1-201ENSMUST00000021594 Lce3dE9Q8V1 98 aa3.09□□□□□ -1.91
Tdp1-201ENSMUST00000021594 Mt4P47945 62 aa3.09□□□□□ -1.92
Tdp1-201ENSMUST00000021594 Krtap4-9B1AQA9 244 aa3.07□□□□□ -1.92
Tdp1-201ENSMUST00000021594 Lce3eF8VQJ0 98 aa3.07□□□□□ -1.92
Tdp1-201ENSMUST00000021594 Sprr2kO70562 68 aa3.07□□□□□ -1.92
Tdp1-201ENSMUST00000021594 Lce3fQ6PAI4 98 aa3.07□□□□□ -1.92
Tdp1-201ENSMUST00000021594 Sprr2eO70556 76 aa3.07□□□□□ -1.92
Tdp1-201ENSMUST00000021594 Lce1bQ9D149 137 aa3.05□□□□□ -1.92
Tdp1-201ENSMUST00000021594 Gm38119A0A0A6YX29 146 aa3.03□□□□□ -1.92
Tdp1-201ENSMUST00000021594 ObscnA2AAJ9 8891 aaKnown RBP2.98□□□□□ -1.93
Tdp1-201ENSMUST00000021594 2300003K06RikA2A4M0 262 aa2.98□□□□□ -1.93
Tdp1-201ENSMUST00000021594 Sprr2fO70557 76 aa2.97□□□□□ -1.93
Tdp1-201ENSMUST00000021594 Lce3aQ497I5 98 aa2.97□□□□□ -1.93
Tdp1-201ENSMUST00000021594 Krtap4-13Q9D7P3 165 aa2.97□□□□□ -1.93
Tdp1-201ENSMUST00000021594 Gm11554B1AQB2 190 aa2.95□□□□□ -1.94
Tdp1-201ENSMUST00000021594 Krtap31-2Q8CAY5 177 aa2.95□□□□□ -1.94
Tdp1-201ENSMUST00000021594 Krtap31-1Q9D644 177 aa2.95□□□□□ -1.94
Tdp1-201ENSMUST00000021594 Mt1P02802 61 aaKnown RBP2.92□□□□□ -1.94
Tdp1-201ENSMUST00000021594 Gm29735A0A1B0GT06 219 aa2.91□□□□□ -1.94
Tdp1-201ENSMUST00000021594 Lce1lQ9D1G7 135 aa2.86□□□□□ -1.95
Tdp1-201ENSMUST00000021594 Lce1kJ3QP15 125 aa2.85□□□□□ -1.95
Tdp1-201ENSMUST00000021594 Krtap6-3A0A087WQL6 57 aa2.8□□□□□ -1.96
Tdp1-201ENSMUST00000021594 Gm11567Q9D141 195 aa2.78□□□□□ -1.96
Tdp1-201ENSMUST00000021594 Gm11568A2A4M2 211 aa2.75□□□□□ -1.97
Tdp1-201ENSMUST00000021594 Krtap9-1Q64526 186 aa2.75□□□□□ -1.97
Tdp1-201ENSMUST00000021594 Gm2431E9Q8S1 172 aa2.71□□□□□ -1.98
Tdp1-201ENSMUST00000021594 Krtap5-2Q9D5Z7 189 aa2.71□□□□□ -1.98
Tdp1-201ENSMUST00000021594 Krtap20-2E9Q0A8 60 aa2.69□□□□□ -1.98
Tdp1-201ENSMUST00000021594 Krtap4-16Q91W93 202 aa2.65□□□□□ -1.99
Tdp1-201ENSMUST00000021594 Gm10153A0A1B0GRL1 320 aa2.64□□□□□ -1.99
Tdp1-201ENSMUST00000021594 Gm10024A0A0A0MQA4 119 aa2.62□□□□□ -1.99
Tdp1-201ENSMUST00000021594 Gm45337A0A1B0GS71 263 aa2.61□□□□□ -1.99
Tdp1-201ENSMUST00000021594 Mt3P28184 68 aa2.59□□□□□ -1.99
Tdp1-201ENSMUST00000021594 Macf1Q9QXZ0 7354 aaKnown RBP2.55□□□□□ -2
Tdp1-201ENSMUST00000021594 Krtap5-4Q62220 223 aa2.48□□□□□ -2.01
Tdp1-201ENSMUST00000021594 Gm4553A0A1B0GSA9 284 aa2.47□□□□□ -2.01
Tdp1-201ENSMUST00000021594 Gm11559Q9D3H7 191 aa2.45□□□□□ -2.02
Tdp1-201ENSMUST00000021594 Hmcn1D3YXG0 5634 aa2.44□□□□□ -2.02
Tdp1-201ENSMUST00000021594 Gm40460A0A1B0GR10 244 aa2.42□□□□□ -2.02
Tdp1-201ENSMUST00000021594 Gm7579A0A1B0GRJ4 243 aa2.42□□□□□ -2.02
Tdp1-201ENSMUST00000021594 Krtap5-5Q2TA51 241 aa2.42□□□□□ -2.02
Tdp1-201ENSMUST00000021594 Krtap5-1Q64507 230 aa2.42□□□□□ -2.02
Tdp1-201ENSMUST00000021594 Eppk1Q8R0W0 6548 aa2.37□□□□□ -2.03
Tdp1-201ENSMUST00000021594 Kmt2dQ6PDK2 5588 aa2.37□□□□□ -2.03
Tdp1-201ENSMUST00000021594 Gm4559A4IF42 199 aa2.34□□□□□ -2.03
Tdp1-201ENSMUST00000021594 1110025L11RikO09048 78 aa2.27□□□□□ -2.05
Tdp1-201ENSMUST00000021594 Krtap6-5Q925H3 78 aa2.27□□□□□ -2.05
Tdp1-201ENSMUST00000021594 Muc19Q6PZE0 7524 aa2.26□□□□□ -2.05
Tdp1-201ENSMUST00000021594 Gm11639A0A1D5RLM8 5808 aa2.26□□□□□ -2.05
Tdp1-201ENSMUST00000021594 Muc16A0A140LJ72 8478 aa2.24□□□□□ -2.05
Tdp1-201ENSMUST00000021594 DstQ91ZU6 7393 aaKnown RBP2.19□□□□□ -2.06
Tdp1-201ENSMUST00000021594 Sprr2bO70554 98 aa2.17□□□□□ -2.06
Tdp1-201ENSMUST00000021594 Gpr98Q8VHN7 6298 aaKnown RBP2.12□□□□□ -2.07
Tdp1-201ENSMUST00000021594 NebE9Q1W3 7152 aa2.08□□□□□ -2.08
Tdp1-201ENSMUST00000021594 AhnakE9Q616 5656 aaKnown RBP2.03□□□□□ -2.08
Tdp1-201ENSMUST00000021594 Gm10229O08631 77 aa2□□□□□ -2.09
Tdp1-201ENSMUST00000021594 Krtap21-1Q925H4 128 aa1.86□□□□□ -2.11
Tdp1-201ENSMUST00000021594 Phgr1Q8K0G7 91 aa1.83□□□□□ -2.12
Tdp1-201ENSMUST00000021594 Krtap6-2O08884 159 aa1.67□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 130.8 ms