RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 2300003K06RikA2A4M0 262 aa6.97□□□□□ -1.29
Trim47-201ENSMUST00000021120 Gm10272F7CZ33 110 aa6.95□□□□□ -1.3
Trim47-201ENSMUST00000021120 Krtap6-3A0A087WQL6 57 aa6.83□□□□□ -1.32
Trim47-201ENSMUST00000021120 Krtap4-7Q9D732 168 aa6.82□□□□□ -1.32
Trim47-201ENSMUST00000021120 Lce1lQ9D1G7 135 aa6.72□□□□□ -1.33
Trim47-201ENSMUST00000021120 Lce3bQ9CQM7 98 aa6.67□□□□□ -1.34
Trim47-201ENSMUST00000021120 Krtap31-1Q9D644 177 aa6.65□□□□□ -1.34
Trim47-201ENSMUST00000021120 Sprr2iO70560 76 aa6.65□□□□□ -1.35
Trim47-201ENSMUST00000021120 Lce1cQ9D1C5 147 aa6.62□□□□□ -1.35
Trim47-201ENSMUST00000021120 Syne1Q6ZWR6 8799 aa6.59□□□□□ -1.35
Trim47-201ENSMUST00000021120 Krtap19-4Q925H7 84 aa6.5□□□□□ -1.37
Trim47-201ENSMUST00000021120 A0A1Y7VJH8 109 aa6.44□□□□□ -1.38
Trim47-201ENSMUST00000021120 Gm10100J3QK64 120 aa6.43□□□□□ -1.38
Trim47-201ENSMUST00000021120 Lce1kJ3QP15 125 aa6.42□□□□□ -1.38
Trim47-201ENSMUST00000021120 Lce1fB9EJP6 147 aa6.38□□□□□ -1.39
Trim47-201ENSMUST00000021120 Krtap20-2E9Q0A8 60 aa6.38□□□□□ -1.39
Trim47-201ENSMUST00000021120 Lce1a1Q9CQH5 143 aa6.38□□□□□ -1.39
Trim47-201ENSMUST00000021120 Gm10142J3KMP7 120 aa6.33□□□□□ -1.4
Trim47-201ENSMUST00000021120 Krtap5-2Q9D5Z7 189 aa6.31□□□□□ -1.4
Trim47-201ENSMUST00000021120 Sprr2fO70557 76 aa6.28□□□□□ -1.4
Trim47-201ENSMUST00000021120 Gm11568A2A4M2 211 aa6.21□□□□□ -1.42
Trim47-201ENSMUST00000021120 Krtap9-1Q64526 186 aa6.21□□□□□ -1.42
Trim47-201ENSMUST00000021120 Lce3cQ91V05 98 aa6.18□□□□□ -1.42
Trim47-201ENSMUST00000021120 Sprr2hO70559 108 aa6.17□□□□□ -1.42
Trim47-201ENSMUST00000021120 Sprr2eO70556 76 aa6.17□□□□□ -1.42
Trim47-201ENSMUST00000021120 Mt1P02802 61 aaKnown RBP6.12□□□□□ -1.43
Trim47-201ENSMUST00000021120 Lce3dE9Q8V1 98 aa6.09□□□□□ -1.43
Trim47-201ENSMUST00000021120 Lce3eF8VQJ0 98 aa6.02□□□□□ -1.45
Trim47-201ENSMUST00000021120 Lce3fQ6PAI4 98 aa6.02□□□□□ -1.45
Trim47-201ENSMUST00000021120 Gm11559Q9D3H7 191 aa5.96□□□□□ -1.46
Trim47-201ENSMUST00000021120 Krtap31-2Q8CAY5 177 aa5.94□□□□□ -1.46
Trim47-201ENSMUST00000021120 Gm4553A0A1B0GSA9 284 aa5.91□□□□□ -1.46
Trim47-201ENSMUST00000021120 Lce3aQ497I5 98 aa5.87□□□□□ -1.47
Trim47-201ENSMUST00000021120 Gm10153A0A1B0GRL1 320 aa5.84□□□□□ -1.47
Trim47-201ENSMUST00000021120 Macf1Q9QXZ0 7354 aaKnown RBP5.84□□□□□ -1.48
Trim47-201ENSMUST00000021120 ObscnA2AAJ9 8891 aaKnown RBP5.82□□□□□ -1.48
Trim47-201ENSMUST00000021120 Gm11554B1AQB2 190 aa5.8□□□□□ -1.48
Trim47-201ENSMUST00000021120 Gm45337A0A1B0GS71 263 aa5.76□□□□□ -1.49
Trim47-201ENSMUST00000021120 Gm2431E9Q8S1 172 aa5.71□□□□□ -1.49
Trim47-201ENSMUST00000021120 Krtap4-16Q91W93 202 aa5.66□□□□□ -1.5
Trim47-201ENSMUST00000021120 A030005L19RikA0A1Y7VIU2 113 aa5.62□□□□□ -1.51
Trim47-201ENSMUST00000021120 Hmcn1D3YXG0 5634 aa5.59□□□□□ -1.51
Trim47-201ENSMUST00000021120 Kmt2dQ6PDK2 5588 aa5.58□□□□□ -1.52
Trim47-201ENSMUST00000021120 Gm40460A0A1B0GR10 244 aa5.58□□□□□ -1.52
Trim47-201ENSMUST00000021120 Gm7579A0A1B0GRJ4 243 aa5.58□□□□□ -1.52
Trim47-201ENSMUST00000021120 Krtap5-5Q2TA51 241 aa5.58□□□□□ -1.52
Trim47-201ENSMUST00000021120 Krtap5-4Q62220 223 aa5.58□□□□□ -1.52
Trim47-201ENSMUST00000021120 Mt3P28184 68 aa5.55□□□□□ -1.52
Trim47-201ENSMUST00000021120 Eppk1Q8R0W0 6548 aa5.38□□□□□ -1.55
Trim47-201ENSMUST00000021120 Gm39115A0A1B0GSH7 232 aa5.33□□□□□ -1.56
Trim47-201ENSMUST00000021120 A0A1Y7VLE6 161 aa5.32□□□□□ -1.56
Trim47-201ENSMUST00000021120 Muc19Q6PZE0 7524 aa5.18□□□□□ -1.58
Trim47-201ENSMUST00000021120 DstQ91ZU6 7393 aaKnown RBP5.11□□□□□ -1.59
Trim47-201ENSMUST00000021120 Gm11639A0A1D5RLM8 5808 aa5.11□□□□□ -1.59
Trim47-201ENSMUST00000021120 Gm10024A0A0A0MQA4 119 aa5.1□□□□□ -1.59
Trim47-201ENSMUST00000021120 Gpr98Q8VHN7 6298 aaKnown RBP4.82□□□□□ -1.64
Trim47-201ENSMUST00000021120 Gm45618A0A1B0GSA0 219 aa4.78□□□□□ -1.64
Trim47-201ENSMUST00000021120 AhnakE9Q616 5656 aaKnown RBP4.77□□□□□ -1.65
Trim47-201ENSMUST00000021120 NebE9Q1W3 7152 aa4.73□□□□□ -1.65
Trim47-201ENSMUST00000021120 1110025L11RikO09048 78 aa4.54□□□□□ -1.68
Trim47-201ENSMUST00000021120 Krtap6-5Q925H3 78 aa4.54□□□□□ -1.68
Trim47-201ENSMUST00000021120 Muc16A0A140LJ72 8478 aa4.51□□□□□ -1.69
Trim47-201ENSMUST00000021120 A0A1Y7VJ07 166 aa4.36□□□□□ -1.71
Trim47-201ENSMUST00000021120 Gm29735A0A1B0GT06 219 aa4.17□□□□□ -1.74
Trim47-201ENSMUST00000021120 Sprr2bO70554 98 aa4.11□□□□□ -1.75
Trim47-201ENSMUST00000021120 Gm10229O08631 77 aa4.05□□□□□ -1.76
Trim47-201ENSMUST00000021120 Gm11567Q9D141 195 aa4.04□□□□□ -1.76
Trim47-201ENSMUST00000021120 Krtap21-1Q925H4 128 aa3.68□□□□□ -1.82
Trim47-201ENSMUST00000021120 A0A286YCP9 139 aa3.62□□□□□ -1.83
Trim47-201ENSMUST00000021120 Phgr1Q8K0G7 91 aa3.61□□□□□ -1.83
Trim47-201ENSMUST00000021120 Krtap6-2O08884 159 aa3.51□□□□□ -1.85
Trim47-201ENSMUST00000021120 A030003K21RikA0A1Y7VIM3 128 aa2.91□□□□□ -1.94
Trim47-201ENSMUST00000021120 Krtap5-1Q64507 230 aa2.87□□□□□ -1.95
Trim47-201ENSMUST00000021120 Krtap28-10A0A1Y7VP58 119 aa2.61□□□□□ -1.99
Trim47-201ENSMUST00000021120 Gm7544A0A1Y7VJ58 118 aa2.53□□□□□ -2
Trim47-201ENSMUST00000021120 Gm4559A4IF42 199 aa2.38□□□□□ -2.03
Trim47-201ENSMUST00000021120 A030005K14RikA0A1Y7VNY1 122 aa2.26□□□□□ -2.05
Trim47-201ENSMUST00000021120 Gm6217A0A1Y7VJK9 128 aa2.25□□□□□ -2.05
Trim47-201ENSMUST00000021120 Krtap28-13A0A087WQP5 138 aa2.13□□□□□ -2.07
Trim47-201ENSMUST00000021120 A030014E15RikA0A1Y7VJV2 120 aa1.53□□□□□ -2.16
Retrieved 80 of 22,080 RNA–protein pairs in 11.6 ms