RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Muc16A0A140LJ72 8478 aa3.44□□□□□ -1.86
Rnft1-201ENSMUST00000020827 Krtap4-2B1AQ85 167 aa3.4□□□□□ -1.87
Rnft1-201ENSMUST00000020827 Gm11938Q9D3H4 131 aa3.39□□□□□ -1.87
Rnft1-201ENSMUST00000020827 Macf1Q9QXZ0 7354 aaKnown RBP3.37□□□□□ -1.87
Rnft1-201ENSMUST00000020827 Mt4P47945 62 aa3.37□□□□□ -1.87
Rnft1-201ENSMUST00000020827 Gm38119A0A0A6YX29 146 aa3.34□□□□□ -1.87
Rnft1-201ENSMUST00000020827 Gm11564A2A4L9 201 aa3.31□□□□□ -1.88
Rnft1-201ENSMUST00000020827 Gm11595B1AQA7 289 aa3.31□□□□□ -1.88
Rnft1-201ENSMUST00000020827 Krtap4-8B1AQA8 209 aa3.31□□□□□ -1.88
Rnft1-201ENSMUST00000020827 Lce1gQ9D195 139 aa3.31□□□□□ -1.88
Rnft1-201ENSMUST00000020827 Gm11596B1AQB0 205 aa3.3□□□□□ -1.88
Rnft1-201ENSMUST00000020827 Krtap4-9B1AQA9 244 aa3.3□□□□□ -1.88
Rnft1-201ENSMUST00000020827 ObscnA2AAJ9 8891 aaKnown RBP3.29□□□□□ -1.88
Rnft1-201ENSMUST00000020827 Sprr2gO70558 76 aa3.27□□□□□ -1.89
Rnft1-201ENSMUST00000020827 Krtap4-13Q9D7P3 165 aa3.24□□□□□ -1.89
Rnft1-201ENSMUST00000020827 Gm11562A0PK51 136 aa3.24□□□□□ -1.89
Rnft1-201ENSMUST00000020827 A0A286YCP9 139 aa3.2□□□□□ -1.9
Rnft1-201ENSMUST00000020827 Kmt2dQ6PDK2 5588 aa3.2□□□□□ -1.9
Rnft1-201ENSMUST00000020827 Sprr2dO70555 85 aa3.19□□□□□ -1.9
Rnft1-201ENSMUST00000020827 2300003K06RikA2A4M0 262 aa3.15□□□□□ -1.9
Rnft1-201ENSMUST00000020827 Lce3bQ9CQM7 98 aa3.15□□□□□ -1.91
Rnft1-201ENSMUST00000020827 Gm10100J3QK64 120 aa3.11□□□□□ -1.91
Rnft1-201ENSMUST00000020827 Sprr2kO70562 68 aa3.11□□□□□ -1.91
Rnft1-201ENSMUST00000020827 Lce1bQ9D149 137 aa3.06□□□□□ -1.92
Rnft1-201ENSMUST00000020827 Muc19Q6PZE0 7524 aa3.05□□□□□ -1.92
Rnft1-201ENSMUST00000020827 Lce1kJ3QP15 125 aa3.05□□□□□ -1.92
Rnft1-201ENSMUST00000020827 Lce3cQ91V05 98 aa3□□□□□ -1.93
Rnft1-201ENSMUST00000020827 Gm10142J3KMP7 120 aa2.99□□□□□ -1.93
Rnft1-201ENSMUST00000020827 Lce3eF8VQJ0 98 aa2.97□□□□□ -1.93
Rnft1-201ENSMUST00000020827 Lce3fQ6PAI4 98 aa2.97□□□□□ -1.93
Rnft1-201ENSMUST00000020827 Lce3dE9Q8V1 98 aa2.97□□□□□ -1.93
Rnft1-201ENSMUST00000020827 Krtap20-2E9Q0A8 60 aa2.94□□□□□ -1.94
Rnft1-201ENSMUST00000020827 Gm11568A2A4M2 211 aa2.93□□□□□ -1.94
Rnft1-201ENSMUST00000020827 Krtap9-1Q64526 186 aa2.93□□□□□ -1.94
Rnft1-201ENSMUST00000020827 Lce1lQ9D1G7 135 aa2.93□□□□□ -1.94
Rnft1-201ENSMUST00000020827 Hmcn1D3YXG0 5634 aa2.92□□□□□ -1.94
Rnft1-201ENSMUST00000020827 Krtap19-4Q925H7 84 aa2.91□□□□□ -1.94
Rnft1-201ENSMUST00000020827 Sprr2hO70559 108 aa2.91□□□□□ -1.94
Rnft1-201ENSMUST00000020827 Krtap4-16Q91W93 202 aa2.88□□□□□ -1.95
Rnft1-201ENSMUST00000020827 Mt1P02802 61 aaKnown RBP2.86□□□□□ -1.95
Rnft1-201ENSMUST00000020827 4933428G20RikQ9D3X4 101 aa2.83□□□□□ -1.96
Rnft1-201ENSMUST00000020827 DstQ91ZU6 7393 aaKnown RBP2.81□□□□□ -1.96
Rnft1-201ENSMUST00000020827 Lce3aQ497I5 98 aa2.8□□□□□ -1.96
Rnft1-201ENSMUST00000020827 Krtap31-1Q9D644 177 aa2.76□□□□□ -1.97
Rnft1-201ENSMUST00000020827 Sprr2iO70560 76 aa2.74□□□□□ -1.97
Rnft1-201ENSMUST00000020827 Krtap6-3A0A087WQL6 57 aa2.68□□□□□ -1.98
Rnft1-201ENSMUST00000020827 Gm11554B1AQB2 190 aa2.65□□□□□ -1.98
Rnft1-201ENSMUST00000020827 Krtap5-2Q9D5Z7 189 aa2.65□□□□□ -1.98
Rnft1-201ENSMUST00000020827 Gm10153A0A1B0GRL1 320 aa2.64□□□□□ -1.99
Rnft1-201ENSMUST00000020827 Sprr2eO70556 76 aa2.62□□□□□ -1.99
Rnft1-201ENSMUST00000020827 Eppk1Q8R0W0 6548 aa2.59□□□□□ -1.99
Rnft1-201ENSMUST00000020827 Sprr2fO70557 76 aa2.53□□□□□ -2
Rnft1-201ENSMUST00000020827 NebE9Q1W3 7152 aa2.52□□□□□ -2.01
Rnft1-201ENSMUST00000020827 Gm11639A0A1D5RLM8 5808 aa2.5□□□□□ -2.01
Rnft1-201ENSMUST00000020827 Gm2431E9Q8S1 172 aa2.48□□□□□ -2.01
Rnft1-201ENSMUST00000020827 Gm11559Q9D3H7 191 aa2.45□□□□□ -2.02
Rnft1-201ENSMUST00000020827 Gm4553A0A1B0GSA9 284 aa2.39□□□□□ -2.03
Rnft1-201ENSMUST00000020827 Gm10024A0A0A0MQA4 119 aa2.39□□□□□ -2.03
Rnft1-201ENSMUST00000020827 Gm45337A0A1B0GS71 263 aa2.38□□□□□ -2.03
Rnft1-201ENSMUST00000020827 Mt3P28184 68 aa2.37□□□□□ -2.03
Rnft1-201ENSMUST00000020827 Gm40460A0A1B0GR10 244 aa2.25□□□□□ -2.05
Rnft1-201ENSMUST00000020827 Gm7579A0A1B0GRJ4 243 aa2.25□□□□□ -2.05
Rnft1-201ENSMUST00000020827 Krtap5-5Q2TA51 241 aa2.25□□□□□ -2.05
Rnft1-201ENSMUST00000020827 Krtap5-4Q62220 223 aa2.25□□□□□ -2.05
Rnft1-201ENSMUST00000020827 Gm45618A0A1B0GSA0 219 aa2.24□□□□□ -2.05
Rnft1-201ENSMUST00000020827 Gm39115A0A1B0GSH7 232 aa2.17□□□□□ -2.06
Rnft1-201ENSMUST00000020827 Gpr98Q8VHN7 6298 aaKnown RBP2.17□□□□□ -2.06
Rnft1-201ENSMUST00000020827 AhnakE9Q616 5656 aaKnown RBP2.16□□□□□ -2.06
Rnft1-201ENSMUST00000020827 1110025L11RikO09048 78 aa2.11□□□□□ -2.07
Rnft1-201ENSMUST00000020827 Krtap6-5Q925H3 78 aa2.11□□□□□ -2.07
Rnft1-201ENSMUST00000020827 Gm29735A0A1B0GT06 219 aa2.05□□□□□ -2.08
Rnft1-201ENSMUST00000020827 Gm11567Q9D141 195 aa2.01□□□□□ -2.09
Rnft1-201ENSMUST00000020827 Krtap31-2Q8CAY5 177 aa1.96□□□□□ -2.1
Rnft1-201ENSMUST00000020827 Gm10229O08631 77 aa1.85□□□□□ -2.11
Rnft1-201ENSMUST00000020827 Krtap21-1Q925H4 128 aa1.77□□□□□ -2.13
Rnft1-201ENSMUST00000020827 Phgr1Q8K0G7 91 aa1.73□□□□□ -2.13
Rnft1-201ENSMUST00000020827 Sprr2bO70554 98 aa1.7□□□□□ -2.14
Rnft1-201ENSMUST00000020827 Krtap6-2O08884 159 aa1.59□□□□□ -2.15
Rnft1-201ENSMUST00000020827 Krtap5-1Q64507 230 aa1.55□□□□□ -2.16
Rnft1-201ENSMUST00000020827 Gm4559A4IF42 199 aa1.31□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 3660.9 ms