RNA–Protein interactions for RNA: ENSMUST00000018744.14

Shmt1-201, Transcript of Serine hydroxymethyltransferase, cytosolic, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shmt1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1-201ENSMUST00000018744 A030005L19RikA0A1Y7VIU2 113 aa4.39□□□□□ -1.71
Shmt1-201ENSMUST00000018744 Krtap4-1Q3UUY3 169 aa4.39□□□□□ -1.71
Shmt1-201ENSMUST00000018744 Krtap31-1Q9D644 177 aa4.35□□□□□ -1.71
Shmt1-201ENSMUST00000018744 Lce1gQ9D195 139 aa4.31□□□□□ -1.72
Shmt1-201ENSMUST00000018744 Fsip2A2ARZ3 6995 aa4.3□□□□□ -1.72
Shmt1-201ENSMUST00000018744 Sprr2hO70559 108 aa4.28□□□□□ -1.72
Shmt1-201ENSMUST00000018744 Lce3eF8VQJ0 98 aa4.28□□□□□ -1.72
Shmt1-201ENSMUST00000018744 Lce3fQ6PAI4 98 aa4.28□□□□□ -1.72
Shmt1-201ENSMUST00000018744 Krtap4-2B1AQ85 167 aa4.25□□□□□ -1.73
Shmt1-201ENSMUST00000018744 Sprr2fO70557 76 aa4.24□□□□□ -1.73
Shmt1-201ENSMUST00000018744 Syne2Q6ZWQ0 6874 aaKnown RBP4.24□□□□□ -1.73
Shmt1-201ENSMUST00000018744 Mt4P47945 62 aa4.24□□□□□ -1.73
Shmt1-201ENSMUST00000018744 Gm11596B1AQB0 205 aa4.23□□□□□ -1.73
Shmt1-201ENSMUST00000018744 Krtap4-16Q91W93 202 aa4.23□□□□□ -1.73
Shmt1-201ENSMUST00000018744 Gm38119A0A0A6YX29 146 aa4.22□□□□□ -1.73
Shmt1-201ENSMUST00000018744 Gm11564A2A4L9 201 aa4.22□□□□□ -1.73
Shmt1-201ENSMUST00000018744 Gm11563B1AQ90 168 aa4.22□□□□□ -1.73
Shmt1-201ENSMUST00000018744 Gm11595B1AQA7 289 aa4.22□□□□□ -1.73
Shmt1-201ENSMUST00000018744 Krtap4-8B1AQA8 209 aa4.22□□□□□ -1.73
Shmt1-201ENSMUST00000018744 Lce3aQ497I5 98 aa4.22□□□□□ -1.73
Shmt1-201ENSMUST00000018744 Sprr2eO70556 76 aa4.19□□□□□ -1.74
Shmt1-201ENSMUST00000018744 A030005K14RikA0A1Y7VNY1 122 aa4.17□□□□□ -1.74
Shmt1-201ENSMUST00000018744 Lce1bQ9D149 137 aa4.16□□□□□ -1.74
Shmt1-201ENSMUST00000018744 Krtap4-9B1AQA9 244 aa4.15□□□□□ -1.74
Shmt1-201ENSMUST00000018744 2300003K06RikA2A4M0 262 aa4.14□□□□□ -1.75
Shmt1-201ENSMUST00000018744 ObscnA2AAJ9 8891 aaKnown RBP4.12□□□□□ -1.75
Shmt1-201ENSMUST00000018744 Muc16A0A140LJ72 8478 aa4.09□□□□□ -1.76
Shmt1-201ENSMUST00000018744 Krtap31-2Q8CAY5 177 aa4.06□□□□□ -1.76
Shmt1-201ENSMUST00000018744 A030003K21RikA0A1Y7VIM3 128 aa4.03□□□□□ -1.76
Shmt1-201ENSMUST00000018744 Gm6217A0A1Y7VJK9 128 aa4.03□□□□□ -1.76
Shmt1-201ENSMUST00000018744 Sprr2kO70562 68 aa4.01□□□□□ -1.77
Shmt1-201ENSMUST00000018744 Krtap4-13Q9D7P3 165 aa4.01□□□□□ -1.77
Shmt1-201ENSMUST00000018744 Krtap28-13A0A087WQP5 138 aa3.99□□□□□ -1.77
Shmt1-201ENSMUST00000018744 A0A286YCP9 139 aa3.99□□□□□ -1.77
Shmt1-201ENSMUST00000018744 Lce1kJ3QP15 125 aa3.96□□□□□ -1.78
Shmt1-201ENSMUST00000018744 Mt1P02802 61 aaKnown RBP3.95□□□□□ -1.78
Shmt1-201ENSMUST00000018744 Lce1lQ9D1G7 135 aa3.93□□□□□ -1.78
Shmt1-201ENSMUST00000018744 Krtap4-7Q9D732 168 aa3.87□□□□□ -1.79
Shmt1-201ENSMUST00000018744 Gm11568A2A4M2 211 aa3.79□□□□□ -1.8
Shmt1-201ENSMUST00000018744 Krtap9-1Q64526 186 aa3.79□□□□□ -1.8
Shmt1-201ENSMUST00000018744 Krtap20-2E9Q0A8 60 aa3.73□□□□□ -1.81
Shmt1-201ENSMUST00000018744 Krtap5-2Q9D5Z7 189 aa3.67□□□□□ -1.82
Shmt1-201ENSMUST00000018744 Gm10024A0A0A0MQA4 119 aa3.61□□□□□ -1.83
Shmt1-201ENSMUST00000018744 Macf1Q9QXZ0 7354 aaKnown RBP3.61□□□□□ -1.83
Shmt1-201ENSMUST00000018744 Gm10153A0A1B0GRL1 320 aa3.57□□□□□ -1.84
Shmt1-201ENSMUST00000018744 Krtap6-3A0A087WQL6 57 aa3.56□□□□□ -1.84
Shmt1-201ENSMUST00000018744 A0A1Y7VJ07 166 aa3.49□□□□□ -1.85
Shmt1-201ENSMUST00000018744 Mt3P28184 68 aa3.47□□□□□ -1.85
Shmt1-201ENSMUST00000018744 Hmcn1D3YXG0 5634 aa3.43□□□□□ -1.86
Shmt1-201ENSMUST00000018744 Kmt2dQ6PDK2 5588 aa3.39□□□□□ -1.87
Shmt1-201ENSMUST00000018744 Gm4553A0A1B0GSA9 284 aa3.34□□□□□ -1.87
Shmt1-201ENSMUST00000018744 Gm45337A0A1B0GS71 263 aa3.33□□□□□ -1.88
Shmt1-201ENSMUST00000018744 Gm11559Q9D3H7 191 aa3.31□□□□□ -1.88
Shmt1-201ENSMUST00000018744 Muc19Q6PZE0 7524 aa3.26□□□□□ -1.89
Shmt1-201ENSMUST00000018744 Gm2431E9Q8S1 172 aa3.26□□□□□ -1.89
Shmt1-201ENSMUST00000018744 Gm11554B1AQB2 190 aa3.25□□□□□ -1.89
Shmt1-201ENSMUST00000018744 Gm40460A0A1B0GR10 244 aa3.23□□□□□ -1.89
Shmt1-201ENSMUST00000018744 Gm7579A0A1B0GRJ4 243 aa3.23□□□□□ -1.89
Shmt1-201ENSMUST00000018744 Krtap5-5Q2TA51 241 aa3.23□□□□□ -1.89
Shmt1-201ENSMUST00000018744 Krtap5-4Q62220 223 aa3.23□□□□□ -1.89
Shmt1-201ENSMUST00000018744 1110025L11RikO09048 78 aa3.02□□□□□ -1.93
Shmt1-201ENSMUST00000018744 Krtap6-5Q925H3 78 aa3.02□□□□□ -1.93
Shmt1-201ENSMUST00000018744 DstQ91ZU6 7393 aaKnown RBP2.98□□□□□ -1.93
Shmt1-201ENSMUST00000018744 A030014E15RikA0A1Y7VJV2 120 aa2.97□□□□□ -1.93
Shmt1-201ENSMUST00000018744 Gm39115A0A1B0GSH7 232 aa2.95□□□□□ -1.94
Shmt1-201ENSMUST00000018744 Gm11639A0A1D5RLM8 5808 aa2.91□□□□□ -1.94
Shmt1-201ENSMUST00000018744 Eppk1Q8R0W0 6548 aa2.79□□□□□ -1.96
Shmt1-201ENSMUST00000018744 AhnakE9Q616 5656 aaKnown RBP2.78□□□□□ -1.96
Shmt1-201ENSMUST00000018744 Sprr2bO70554 98 aa2.73□□□□□ -1.97
Shmt1-201ENSMUST00000018744 Gm10229O08631 77 aa2.67□□□□□ -1.98
Shmt1-201ENSMUST00000018744 NebE9Q1W3 7152 aa2.65□□□□□ -1.99
Shmt1-201ENSMUST00000018744 Phgr1Q8K0G7 91 aa2.58□□□□□ -2
Shmt1-201ENSMUST00000018744 Gm11567Q9D141 195 aa2.55□□□□□ -2
Shmt1-201ENSMUST00000018744 Krtap21-1Q925H4 128 aa2.49□□□□□ -2.01
Shmt1-201ENSMUST00000018744 Gm45618A0A1B0GSA0 219 aa2.48□□□□□ -2.01
Shmt1-201ENSMUST00000018744 Gm29735A0A1B0GT06 219 aa2.45□□□□□ -2.02
Shmt1-201ENSMUST00000018744 Gpr98Q8VHN7 6298 aaKnown RBP2.44□□□□□ -2.02
Shmt1-201ENSMUST00000018744 Krtap6-2O08884 159 aa2.25□□□□□ -2.05
Shmt1-201ENSMUST00000018744 Krtap5-1Q64507 230 aa1.8□□□□□ -2.12
Shmt1-201ENSMUST00000018744 Gm4559A4IF42 199 aa1.65□□□□□ -2.15
Retrieved 80 of 22,080 RNA–protein pairs in 11.3 ms