RNA–Protein interactions for RNA: ENSMUST00000018315.9

Vmp1-201, Transcript of Vacuole membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vmp1, Length 2,787 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1-201ENSMUST00000018315 Gm38119A0A0A6YX29 146 aa4.22□□□□□ -1.73
Vmp1-201ENSMUST00000018315 Sprr2dO70555 85 aa4.22□□□□□ -1.73
Vmp1-201ENSMUST00000018315 Gm11938Q9D3H4 131 aa4.22□□□□□ -1.73
Vmp1-201ENSMUST00000018315 Gm11562A0PK51 136 aa4.21□□□□□ -1.73
Vmp1-201ENSMUST00000018315 Krtap4-9B1AQA9 244 aa4.19□□□□□ -1.74
Vmp1-201ENSMUST00000018315 A030005K14RikA0A1Y7VNY1 122 aa4.19□□□□□ -1.74
Vmp1-201ENSMUST00000018315 Gm7544A0A1Y7VJ58 118 aa4.15□□□□□ -1.75
Vmp1-201ENSMUST00000018315 Lce3bQ9CQM7 98 aa4.12□□□□□ -1.75
Vmp1-201ENSMUST00000018315 Lce1bQ9D149 137 aa4.09□□□□□ -1.75
Vmp1-201ENSMUST00000018315 4933428G20RikQ9D3X4 101 aa4.07□□□□□ -1.76
Vmp1-201ENSMUST00000018315 Krtap4-13Q9D7P3 165 aa4.07□□□□□ -1.76
Vmp1-201ENSMUST00000018315 Lce1fB9EJP6 147 aa4.05□□□□□ -1.76
Vmp1-201ENSMUST00000018315 Lce1a1Q9CQH5 143 aa4.05□□□□□ -1.76
Vmp1-201ENSMUST00000018315 2300003K06RikA2A4M0 262 aa4.02□□□□□ -1.77
Vmp1-201ENSMUST00000018315 Krtap19-4Q925H7 84 aa4□□□□□ -1.77
Vmp1-201ENSMUST00000018315 Gm10100J3QK64 120 aa3.98□□□□□ -1.77
Vmp1-201ENSMUST00000018315 Sprr2kO70562 68 aa3.96□□□□□ -1.78
Vmp1-201ENSMUST00000018315 Lce3cQ91V05 98 aa3.92□□□□□ -1.78
Vmp1-201ENSMUST00000018315 Lce3eF8VQJ0 98 aa3.88□□□□□ -1.79
Vmp1-201ENSMUST00000018315 Lce3fQ6PAI4 98 aa3.88□□□□□ -1.79
Vmp1-201ENSMUST00000018315 Krtap31-2Q8CAY5 177 aa3.88□□□□□ -1.79
Vmp1-201ENSMUST00000018315 Gm10142J3KMP7 120 aa3.87□□□□□ -1.79
Vmp1-201ENSMUST00000018315 Lce1kJ3QP15 125 aa3.86□□□□□ -1.79
Vmp1-201ENSMUST00000018315 Lce3dE9Q8V1 98 aa3.82□□□□□ -1.8
Vmp1-201ENSMUST00000018315 ObscnA2AAJ9 8891 aaKnown RBP3.81□□□□□ -1.8
Vmp1-201ENSMUST00000018315 Sprr2iO70560 76 aa3.79□□□□□ -1.8
Vmp1-201ENSMUST00000018315 Lce1lQ9D1G7 135 aa3.79□□□□□ -1.8
Vmp1-201ENSMUST00000018315 Krtap31-1Q9D644 177 aa3.76□□□□□ -1.81
Vmp1-201ENSMUST00000018315 Mt1P02802 61 aaKnown RBP3.75□□□□□ -1.81
Vmp1-201ENSMUST00000018315 Sprr2hO70559 108 aa3.72□□□□□ -1.81
Vmp1-201ENSMUST00000018315 Krtap20-2E9Q0A8 60 aa3.72□□□□□ -1.81
Vmp1-201ENSMUST00000018315 Lce3aQ497I5 98 aa3.7□□□□□ -1.82
Vmp1-201ENSMUST00000018315 Gm11568A2A4M2 211 aa3.7□□□□□ -1.82
Vmp1-201ENSMUST00000018315 Krtap9-1Q64526 186 aa3.7□□□□□ -1.82
Vmp1-201ENSMUST00000018315 A0A1Y7VJ07 166 aa3.67□□□□□ -1.82
Vmp1-201ENSMUST00000018315 Krtap6-3A0A087WQL6 57 aa3.63□□□□□ -1.83
Vmp1-201ENSMUST00000018315 Krtap5-2Q9D5Z7 189 aa3.58□□□□□ -1.84
Vmp1-201ENSMUST00000018315 Macf1Q9QXZ0 7354 aaKnown RBP3.56□□□□□ -1.84
Vmp1-201ENSMUST00000018315 A030003K21RikA0A1Y7VIM3 128 aa3.54□□□□□ -1.84
Vmp1-201ENSMUST00000018315 Gm6217A0A1Y7VJK9 128 aa3.52□□□□□ -1.85
Vmp1-201ENSMUST00000018315 Sprr2eO70556 76 aa3.51□□□□□ -1.85
Vmp1-201ENSMUST00000018315 A030014E15RikA0A1Y7VJV2 120 aa3.51□□□□□ -1.85
Vmp1-201ENSMUST00000018315 A0A286YCP9 139 aa3.44□□□□□ -1.86
Vmp1-201ENSMUST00000018315 Gm10153A0A1B0GRL1 320 aa3.43□□□□□ -1.86
Vmp1-201ENSMUST00000018315 Hmcn1D3YXG0 5634 aa3.36□□□□□ -1.87
Vmp1-201ENSMUST00000018315 Kmt2dQ6PDK2 5588 aa3.34□□□□□ -1.88
Vmp1-201ENSMUST00000018315 Sprr2fO70557 76 aa3.33□□□□□ -1.88
Vmp1-201ENSMUST00000018315 Gm11554B1AQB2 190 aa3.31□□□□□ -1.88
Vmp1-201ENSMUST00000018315 Mt3P28184 68 aa3.31□□□□□ -1.88
Vmp1-201ENSMUST00000018315 Gm11559Q9D3H7 191 aa3.31□□□□□ -1.88
Vmp1-201ENSMUST00000018315 Krtap4-16Q91W93 202 aa3.29□□□□□ -1.88
Vmp1-201ENSMUST00000018315 Gm4553A0A1B0GSA9 284 aa3.28□□□□□ -1.88
Vmp1-201ENSMUST00000018315 Gm45337A0A1B0GS71 263 aa3.24□□□□□ -1.89
Vmp1-201ENSMUST00000018315 Gm2431E9Q8S1 172 aa3.23□□□□□ -1.89
Vmp1-201ENSMUST00000018315 Gm10024A0A0A0MQA4 119 aa3.22□□□□□ -1.89
Vmp1-201ENSMUST00000018315 Muc16A0A140LJ72 8478 aa3.19□□□□□ -1.9
Vmp1-201ENSMUST00000018315 Gm40460A0A1B0GR10 244 aa3.13□□□□□ -1.91
Vmp1-201ENSMUST00000018315 Gm7579A0A1B0GRJ4 243 aa3.13□□□□□ -1.91
Vmp1-201ENSMUST00000018315 Krtap5-5Q2TA51 241 aa3.13□□□□□ -1.91
Vmp1-201ENSMUST00000018315 Krtap5-4Q62220 223 aa3.13□□□□□ -1.91
Vmp1-201ENSMUST00000018315 Muc19Q6PZE0 7524 aa3.01□□□□□ -1.93
Vmp1-201ENSMUST00000018315 DstQ91ZU6 7393 aaKnown RBP2.95□□□□□ -1.94
Vmp1-201ENSMUST00000018315 Gm39115A0A1B0GSH7 232 aa2.9□□□□□ -1.94
Vmp1-201ENSMUST00000018315 Gm11639A0A1D5RLM8 5808 aa2.88□□□□□ -1.95
Vmp1-201ENSMUST00000018315 Eppk1Q8R0W0 6548 aa2.85□□□□□ -1.95
Vmp1-201ENSMUST00000018315 1110025L11RikO09048 78 aa2.83□□□□□ -1.96
Vmp1-201ENSMUST00000018315 Krtap6-5Q925H3 78 aa2.83□□□□□ -1.96
Vmp1-201ENSMUST00000018315 AhnakE9Q616 5656 aaKnown RBP2.72□□□□□ -1.97
Vmp1-201ENSMUST00000018315 NebE9Q1W3 7152 aa2.69□□□□□ -1.98
Vmp1-201ENSMUST00000018315 Gm45618A0A1B0GSA0 219 aa2.51□□□□□ -2.01
Vmp1-201ENSMUST00000018315 Gm10229O08631 77 aa2.5□□□□□ -2.01
Vmp1-201ENSMUST00000018315 Gpr98Q8VHN7 6298 aaKnown RBP2.48□□□□□ -2.01
Vmp1-201ENSMUST00000018315 Gm11567Q9D141 195 aa2.47□□□□□ -2.01
Vmp1-201ENSMUST00000018315 Sprr2bO70554 98 aa2.42□□□□□ -2.02
Vmp1-201ENSMUST00000018315 Gm29735A0A1B0GT06 219 aa2.35□□□□□ -2.03
Vmp1-201ENSMUST00000018315 Krtap21-1Q925H4 128 aa2.32□□□□□ -2.04
Vmp1-201ENSMUST00000018315 Phgr1Q8K0G7 91 aa2.21□□□□□ -2.06
Vmp1-201ENSMUST00000018315 Krtap6-2O08884 159 aa2.13□□□□□ -2.07
Vmp1-201ENSMUST00000018315 Krtap5-1Q64507 230 aa1.75□□□□□ -2.13
Vmp1-201ENSMUST00000018315 Gm4559A4IF42 199 aa1.68□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 6.4 ms