RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C YDL114WQ07530 308 aa5.56□□□□□ -1.52
VPS1YKR001C SIL1Q08199 421 aa5.56□□□□□ -1.52
VPS1YKR001C SDH5Q08230 162 aa5.56□□□□□ -1.52
VPS1YKR001C RSA1Q08932 381 aa5.56□□□□□ -1.52
VPS1YKR001C ARP6Q12509 438 aa5.56□□□□□ -1.52
VPS1YKR001C ATG11Q12527 1178 aa5.56□□□□□ -1.52
VPS1YKR001C SET6Q12529 373 aa5.56□□□□□ -1.52
VPS1YKR001C YOS9Q99220 542 aa5.56□□□□□ -1.52
VPS1YKR001C GCD2P12754 651 aaPredicted RBP5.56□□□□□ -1.52
VPS1YKR001C FUS3P16892 353 aaKnown RBP5.56□□□□□ -1.52
VPS1YKR001C AFT1P22149 690 aa5.56□□□□□ -1.52
VPS1YKR001C RPI1P23250 407 aaKnown RBP5.56□□□□□ -1.52
VPS1YKR001C URK1P27515 501 aa5.56□□□□□ -1.52
VPS1YKR001C RAD5P32849 1169 aaPredicted RBP5.56□□□□□ -1.52
VPS1YKR001C GDH2P33327 1092 aaKnown RBP5.56□□□□□ -1.52
VPS1YKR001C TDP1P38319 544 aa5.56□□□□□ -1.52
VPS1YKR001C SRP72P38688 640 aaKnown RBP5.56□□□□□ -1.52
VPS1YKR001C BCD1P38772 366 aa5.56□□□□□ -1.52
VPS1YKR001C RAD55P38953 406 aa5.56□□□□□ -1.52
VPS1YKR001C FRT2P39734 528 aa5.56□□□□□ -1.52
VPS1YKR001C EMP65P40085 556 aa5.56□□□□□ -1.52
VPS1YKR001C ARF3P40994 183 aaRIP-Chip data5.56□□□□□ -1.52 RIP-Chip
VPS1YKR001C DUG1P43616 481 aaKnown RBP5.56□□□□□ -1.52
VPS1YKR001C STB2P46679 850 aa5.56□□□□□ -1.52
VPS1YKR001C PIB2P53191 635 aa5.56□□□□□ -1.52
VPS1YKR001C MNT4P53745 580 aa5.56□□□□□ -1.52
VPS1YKR001C HAP5Q02516 242 aa5.56□□□□□ -1.52
VPS1YKR001C DPB4Q04603 196 aaKnown RBP5.56□□□□□ -1.52
VPS1YKR001C SNA4Q07549 140 aa5.56□□□□□ -1.52
VPS1YKR001C YLR031WQ07978 186 aa5.56□□□□□ -1.52
VPS1YKR001C MMP1Q12372 583 aa5.56□□□□□ -1.52
VPS1YKR001C YOR019WQ99248 730 aa5.56□□□□□ -1.52
VPS1YKR001C FRT1Q99332 602 aa5.56□□□□□ -1.52
VPS1YKR001C YLR358CO13565 187 aa5.55□□□□□ -1.52
VPS1YKR001C CAR2P07991 424 aaKnown RBP5.55□□□□□ -1.52
VPS1YKR001C NUC1P08466 329 aa5.55□□□□□ -1.52
VPS1YKR001C STE12P13574 688 aa5.55□□□□□ -1.52
VPS1YKR001C RIT1P23796 513 aa5.55□□□□□ -1.52
VPS1YKR001C RVS161P25343 265 aaKnown RBP5.55□□□□□ -1.52
VPS1YKR001C YBL010CP32788 280 aa5.55□□□□□ -1.52
VPS1YKR001C YUH1P35127 236 aa5.55□□□□□ -1.52
VPS1YKR001C MNL1P38888 796 aa5.55□□□□□ -1.52
VPS1YKR001C BUD16P39988 312 aa5.55□□□□□ -1.52
VPS1YKR001C NUP82P40368 713 aa5.55□□□□□ -1.52
VPS1YKR001C ILM1P47155 203 aa5.55□□□□□ -1.52
VPS1YKR001C MET13P53128 600 aa5.55□□□□□ -1.52
VPS1YKR001C YNL034WP53963 612 aa5.55□□□□□ -1.52
VPS1YKR001C YNL018CP53976 612 aa5.55□□□□□ -1.52
VPS1YKR001C TGL2P54857 326 aa5.55□□□□□ -1.52
VPS1YKR001C UFD2P54860 961 aa5.55□□□□□ -1.52
VPS1YKR001C SKY1Q03656 742 aa5.55□□□□□ -1.52
VPS1YKR001C UTP5Q04177 643 aaKnown RBP5.55□□□□□ -1.52
VPS1YKR001C SUE1Q06524 206 aa5.55□□□□□ -1.52
VPS1YKR001C SEC62P21825 274 aa5.54□□□□□ -1.52
VPS1YKR001C UBA1P22515 1024 aaKnown RBP5.54□□□□□ -1.52
VPS1YKR001C MIH1P23748 554 aa5.54□□□□□ -1.52
VPS1YKR001C FUB1P25659 250 aa5.54□□□□□ -1.52
VPS1YKR001C SYN8P31377 255 aa5.54□□□□□ -1.52
VPS1YKR001C MYO3P36006 1272 aa5.54□□□□□ -1.52
VPS1YKR001C FLC2P39719 783 aa5.54□□□□□ -1.52
VPS1YKR001C YER184CP39961 794 aa5.54□□□□□ -1.52
VPS1YKR001C INP51P40559 946 aaKnown RBP5.54□□□□□ -1.52
VPS1YKR001C MND2P40577 368 aa5.54□□□□□ -1.52
VPS1YKR001C CCT7P42943 550 aaKnown RBP5.54□□□□□ -1.52
VPS1YKR001C CTK3P46963 296 aaPredicted RBP5.54□□□□□ -1.52
VPS1YKR001C BNA3P47039 444 aaKnown RBP5.54□□□□□ -1.52
VPS1YKR001C RPS7BP48164 190 aaKnown RBP5.54□□□□□ -1.52
VPS1YKR001C MAL11P53048 616 aa5.54□□□□□ -1.52
VPS1YKR001C ORC4P54791 529 aa5.54□□□□□ -1.52
VPS1YKR001C SWP1Q02795 286 aa5.54□□□□□ -1.52
VPS1YKR001C SRL4Q03085 281 aa5.54□□□□□ -1.52
VPS1YKR001C BSC2Q05611 235 aa5.54□□□□□ -1.52
VPS1YKR001C RRT8Q08219 342 aa5.54□□□□□ -1.52
VPS1YKR001C NCR1Q12200 1170 aa5.54□□□□□ -1.52
VPS1YKR001C SEY1Q99287 776 aa5.54□□□□□ -1.52
VPS1YKR001C VAS1P07806 1104 aaKnown RBP5.54□□□□□ -1.52
VPS1YKR001C MATALPHA2P0CY08 210 aa5.54□□□□□ -1.52
VPS1YKR001C HMLALPHA2P0CY09 210 aa5.54□□□□□ -1.52
VPS1YKR001C SUP45P12385 437 aaKnown RBP5.54□□□□□ -1.52
VPS1YKR001C KIN2P13186 1147 aaKnown RBP5.54□□□□□ -1.52
VPS1YKR001C KES1P35844 434 aaKnown RBP5.54□□□□□ -1.52
VPS1YKR001C PIK1P39104 1066 aa5.54□□□□□ -1.52
VPS1YKR001C UTP25P40498 721 aaKnown RBP5.54□□□□□ -1.52
VPS1YKR001C QRI1P43123 477 aaKnown RBP5.54□□□□□ -1.52
VPS1YKR001C RAI1P53063 387 aaKnown RBP5.54□□□□□ -1.52
VPS1YKR001C YNR063WP53749 607 aa5.54□□□□□ -1.52
VPS1YKR001C TBF1Q02457 562 aa5.54□□□□□ -1.52
VPS1YKR001C ISR1Q06098 443 aaKnown RBP5.54□□□□□ -1.52
VPS1YKR001C ARO10Q06408 635 aa5.54□□□□□ -1.52
VPS1YKR001C YPR022CQ12139 1133 aa5.54□□□□□ -1.52
VPS1YKR001C YLL058WQ12198 575 aa5.54□□□□□ -1.52
VPS1YKR001C RAD59Q12223 238 aa5.54□□□□□ -1.52
VPS1YKR001C RTR2Q12378 196 aa5.54□□□□□ -1.52
VPS1YKR001C PRB1P09232 635 aa5.53□□□□□ -1.52
VPS1YKR001C SEC63P14906 663 aa5.53□□□□□ -1.52
VPS1YKR001C RGD1P38339 666 aa5.53□□□□□ -1.52
VPS1YKR001C YHR054CP38780 354 aa5.53□□□□□ -1.52
VPS1YKR001C SSO2P39926 295 aa5.53□□□□□ -1.52
VPS1YKR001C STL1P39932 569 aa5.53□□□□□ -1.52
VPS1YKR001C POL31P46957 487 aa5.53□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 1072.8 ms