RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 FSIP1Q8NA03 581 aa9.6□□□□□ -0.87
PNKP-231ENST00000640501 LINC00301Q8NCQ3 95 aa9.6□□□□□ -0.87
PNKP-231ENST00000640501 RNF214Q8ND24 703 aa9.6□□□□□ -0.87
PNKP-231ENST00000640501 PHKBQ93100 1093 aa9.6□□□□□ -0.87
PNKP-231ENST00000640501 SDF4Q9BRK5 362 aa9.6□□□□□ -0.87
PNKP-231ENST00000640501 ZKSCAN3Q9BRR0 538 aa9.6□□□□□ -0.87
PNKP-231ENST00000640501 TCP11L1Q9NUJ3 509 aa9.6□□□□□ -0.87
PNKP-231ENST00000640501 QSER1Q2KHR3 1735 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 GPR75-ASB3A0A0A6YYF3 556 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 ESPNB1AK53 854 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 CUTAO60888 179 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 SRGNP10124 158 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 LIG1P18858 919 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 RXRAP19793 462 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 CMA1P23946 247 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 CALML3P27482 149 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 BTDP43251 543 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 TYRO3Q06418 890 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 CC2D2BQ6DHV5 1058 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 STYK1Q6J9G0 422 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 TXNRD3Q86VQ6 643 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 RAB11FIP4Q86YS3 637 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 TEX11Q8IYF3 940 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 SUPT20HQ8NEM7 779 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 PGBD1Q96JS3 809 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 PDLIM2Q96JY6 352 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 TIGD1Q96MW7 591 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.59□□□□□ -0.87
PNKP-231ENST00000640501 ANO10Q9NW15 660 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 STK32BQ9NY57 414 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 ANKRD31Q8N7Z5 1873 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 LTBP1Q14766 1721 aa9.59□□□□□ -0.87
PNKP-231ENST00000640501 TNS1Q9HBL0 1735 aaKnown RBP9.59□□□□□ -0.87
PNKP-231ENST00000640501 NR1I2O75469 434 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 MMP10P09238 476 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 KRT2P35908 639 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 SF3B2Q13435 895 aaKnown RBP9.58□□□□□ -0.88
PNKP-231ENST00000640501 DHX8Q14562 1220 aaKnown RBP9.58□□□□□ -0.88
PNKP-231ENST00000640501 CAMK4Q16566 473 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 KANK3Q6NY19 840 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 PODNQ7Z5L7 613 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 ZSCAN30Q86W11 494 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 COL23A1Q86Y22 540 aaPredicted RBP9.58□□□□□ -0.88
PNKP-231ENST00000640501 DIS3L2Q8IYB7 885 aaKnown RBP9.58□□□□□ -0.88
PNKP-231ENST00000640501 STK11IPQ8N1F8 1099 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 ZNF384Q8TF68 577 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 CCDC12Q8WUD4 166 aaPredicted RBP9.58□□□□□ -0.88
PNKP-231ENST00000640501 ANKS1AQ92625 1134 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 CNKSR1Q969H4 720 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 PYM1Q9BRP8 204 aaKnown RBP9.58□□□□□ -0.88
PNKP-231ENST00000640501 FUCA2Q9BTY2 467 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 MYL10Q9BUA6 226 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.58□□□□□ -0.88
PNKP-231ENST00000640501 SH3GLB2Q9NR46 395 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 FAM13BQ9NYF5 915 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 USP25Q9UHP3 1055 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 PCDHA7Q9UN72 937 aa9.58□□□□□ -0.88
PNKP-231ENST00000640501 GAKO14976 1311 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 FOCADQ5VW36 1801 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 WTIPA6NIX2 430 aaPredicted RBP9.57□□□□□ -0.88
PNKP-231ENST00000640501 BECN2A8MW95 431 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 DTNBO60941 627 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 PRDM1O75626 825 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 FKBP1AP62942 108 aaKnown RBP9.57□□□□□ -0.88
PNKP-231ENST00000640501 TFAP4Q01664 338 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 KIAA2012Q0VF49 1180 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 TROAPQ12815 778 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 GALNT17Q6IS24 598 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 TMTC3Q6ZXV5 915 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 ILDR1Q86SU0 546 aaPredicted RBP9.57□□□□□ -0.88
PNKP-231ENST00000640501 NBPF11Q86T75 865 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 CEP57L1Q8IYX8 460 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 PROM2Q8N271 834 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 KRI1Q8N9T8 703 aaKnown RBP9.57□□□□□ -0.88
PNKP-231ENST00000640501 CCDC148Q8NFR7 591 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 SH3RF3Q8TEJ3 882 aaPredicted RBP9.57□□□□□ -0.88
PNKP-231ENST00000640501 TGFBRAP1Q8WUH2 860 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 RTFDC1Q9BY42 306 aaPredicted RBP9.57□□□□□ -0.88
PNKP-231ENST00000640501 INCENPQ9NQS7 918 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 FAM217BQ9NTX9 383 aaPredicted RBP9.57□□□□□ -0.88
PNKP-231ENST00000640501 POLLQ9UGP5 575 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 SWAP70Q9UH65 585 aa9.57□□□□□ -0.88
PNKP-231ENST00000640501 MORC2Q9Y6X9 1032 aaPredicted RBP9.57□□□□□ -0.88
PNKP-231ENST00000640501 MYO3BQ8WXR4 1341 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 CYP2D7A0A087X1C5 515 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 PPFIA3O75145 1194 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 HLA-DOAP06340 250 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 USP17L8P0C7I0 530 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 TRAPPC10P48553 1259 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 ZNF165P49910 485 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 GTF2IP78347 998 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 DIXDC1Q155Q3 683 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 ZNF827Q17R98 1081 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 ANO6Q4KMQ2 910 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 OTUD7BQ6GQQ9 843 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 HHIPL2Q6UWX4 724 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 C16orf86Q6ZW13 317 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 C2CD5Q86YS7 1000 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 CKAP2LQ8IYA6 745 aa9.56□□□□□ -0.88
PNKP-231ENST00000640501 ELOA2Q8IYF1 753 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms