RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CTTNBP2NLQ9P2B4 639 aa20.57■□□□□ 0.88
SCARB2-213ENST00000638680 ASIC3Q9UHC3 531 aa20.57■□□□□ 0.88
SCARB2-213ENST00000638680 RPS6KA1Q15418 735 aa20.57■□□□□ 0.88
SCARB2-213ENST00000638680 NPC1L1Q9UHC9 1359 aa20.57■□□□□ 0.88
SCARB2-213ENST00000638680 KLHL30Q0D2K2 578 aa20.57■□□□□ 0.88
SCARB2-213ENST00000638680 LRRC8AQ8IWT6 810 aa20.57■□□□□ 0.88
SCARB2-213ENST00000638680 FNBP1Q96RU3 617 aa20.57■□□□□ 0.88
SCARB2-213ENST00000638680 IFIH1Q9BYX4 1025 aaKnown RBP20.57■□□□□ 0.88
SCARB2-213ENST00000638680 MTMR3Q13615 1198 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 WHAMMP3Q1A5X7 153 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 SFMBT2Q5VUG0 894 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 HAUS3Q68CZ6 603 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 TPTE2Q6XPS3 522 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 ATP10BO94823 1461 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 FEZ2Q9UHY8 353 aaPredicted RBP20.56■□□□□ 0.88
SCARB2-213ENST00000638680 IRX5P78411 483 aaPredicted RBP20.56■□□□□ 0.88
SCARB2-213ENST00000638680 RIMBP2O15034 1052 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 HSPA1LP34931 641 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 SEPT6Q14141 434 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 OGFOD1Q8N543 542 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 SMC1BQ8NDV3 1235 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 WDR66Q8TBY9 1149 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 MCUR1Q96AQ8 359 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 VEZTQ9HBM0 779 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 BABAM1Q9NWV8 329 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 LRWD1Q9UFC0 647 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 PPP2R2CQ9Y2T4 447 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 SNX29Q8TEQ0 813 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 PALD1Q9ULE6 856 aa20.56■□□□□ 0.88
SCARB2-213ENST00000638680 ZNF790Q6PG37 636 aa20.55■□□□□ 0.88
SCARB2-213ENST00000638680 IP6K1Q92551 441 aa20.55■□□□□ 0.88
SCARB2-213ENST00000638680 PPANQ9NQ55 473 aaKnown RBP20.55■□□□□ 0.88
SCARB2-213ENST00000638680 CROCCP2Q86T23 111 aa20.55■□□□□ 0.88
SCARB2-213ENST00000638680 TEX11Q8IYF3 940 aa20.55■□□□□ 0.88
SCARB2-213ENST00000638680 FAM207AQ9NSI2 230 aaPredicted RBP20.55■□□□□ 0.88
SCARB2-213ENST00000638680 BACH1O14867 736 aa20.55■□□□□ 0.88
SCARB2-213ENST00000638680 EIF6P56537 245 aaKnown RBP20.55■□□□□ 0.88
SCARB2-213ENST00000638680 DDX41Q9UJV9 622 aaKnown RBP20.55■□□□□ 0.88
SCARB2-213ENST00000638680 NUP153P49790 1475 aaKnown RBP20.55■□□□□ 0.88
SCARB2-213ENST00000638680 hCG_1642624A0A1W2PR95 340 aa20.55■□□□□ 0.88
SCARB2-213ENST00000638680 GNGT1P63211 74 aa20.55■□□□□ 0.88
SCARB2-213ENST00000638680 LIN9Q5TKA1 542 aa20.55■□□□□ 0.88
SCARB2-213ENST00000638680 MYSM1Q5VVJ2 828 aa20.55■□□□□ 0.88
SCARB2-213ENST00000638680 RRAGAQ7L523 313 aa20.55■□□□□ 0.88
SCARB2-213ENST00000638680 TTC6Q86TZ1 520 aa20.55■□□□□ 0.88
SCARB2-213ENST00000638680 TMEM87AQ8NBN3 555 aa20.55■□□□□ 0.88
SCARB2-213ENST00000638680 FAM204AQ9H8W3 233 aa20.55■□□□□ 0.88
SCARB2-213ENST00000638680 PLCB1Q9NQ66 1216 aa20.55■□□□□ 0.88
SCARB2-213ENST00000638680 HARSP12081 509 aaKnown RBP20.54■□□□□ 0.88
SCARB2-213ENST00000638680 GUCY2FP51841 1108 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 TSNAXIP1Q2TAA8 658 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 CCDC51Q96ER9 411 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 HHATQ5VTY9 493 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 PEX26Q7Z412 305 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 NELFCDQ8IXH7 590 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 SYCE1Q8N0S2 351 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 MTMR6Q9Y217 621 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 STX10O60499 249 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 PTH1RQ03431 593 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 NCAPH2Q6IBW4 605 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 CABP7Q86V35 215 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 ZC3H12CQ9C0D7 883 aaKnown RBP20.54■□□□□ 0.88
SCARB2-213ENST00000638680 CCDC169A6NNP5 214 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 NONOQ15233 471 aaKnown RBP eCLIP20.54■□□□□ 0.88
SCARB2-213ENST00000638680 KRT71Q3SY84 523 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 HERC4Q5GLZ8 1057 aaPredicted RBP20.54■□□□□ 0.88
SCARB2-213ENST00000638680 CHAMP1Q96JM3 812 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 EFCAB8A8MWE9 144 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 NBPF14Q5TI25 921 aa20.54■□□□□ 0.88
SCARB2-213ENST00000638680 GCP02774 474 aa20.53■□□□□ 0.88
SCARB2-213ENST00000638680 FCHSD1Q86WN1 690 aa20.53■□□□□ 0.88
SCARB2-213ENST00000638680 DSCC1Q9BVC3 393 aa20.53■□□□□ 0.88
SCARB2-213ENST00000638680 VPS54Q9P1Q0 977 aa20.53■□□□□ 0.88
SCARB2-213ENST00000638680 C2CD5Q86YS7 1000 aa20.53■□□□□ 0.88
SCARB2-213ENST00000638680 CCDC105Q8IYK2 499 aa20.53■□□□□ 0.88
SCARB2-213ENST00000638680 RPGRIP1Q96KN7 1286 aa20.53■□□□□ 0.88
SCARB2-213ENST00000638680 USP28Q96RU2 1077 aa20.53■□□□□ 0.88
SCARB2-213ENST00000638680 PYCARDQ9ULZ3 195 aa20.53■□□□□ 0.88
SCARB2-213ENST00000638680 HOXB7P09629 217 aa20.53■□□□□ 0.88
SCARB2-213ENST00000638680 RASA3Q14644 834 aa20.53■□□□□ 0.88
SCARB2-213ENST00000638680 TPCN1Q9ULQ1 816 aa20.53■□□□□ 0.88
SCARB2-213ENST00000638680 FLOT1O75955 427 aa20.53■□□□□ 0.88
SCARB2-213ENST00000638680 KIF24Q5T7B8 1368 aa20.53■□□□□ 0.88
SCARB2-213ENST00000638680 VPS52Q8N1B4 723 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 BAIAP2L1Q9UHR4 511 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 SSH2Q76I76 1423 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 CCDC62Q6P9F0 684 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 MIPOL1Q8TD10 442 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 CAPN7Q9Y6W3 813 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 UHRF1BP1Q6BDS2 1440 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 PPFIA4O75335 1185 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 ZAP70P43403 619 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 LGR6Q9HBX8 967 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 KCNJ18B7U540 433 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 KCNJ12Q14500 433 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 DENND2CQ68D51 928 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 KRT25Q7Z3Z0 450 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 ODF2LQ9ULJ1 636 aa20.52■□□□□ 0.88
SCARB2-213ENST00000638680 PCDH11XQ9BZA7 1347 aa20.52■□□□□ 0.87
SCARB2-213ENST00000638680 PCDH11YQ9BZA8 1340 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms