RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 SDR42E1Q8WUS8 393 aa18.69■□□□□ 0.58
SCARB2-210ENST00000638567 PPP1R13BQ96KQ4 1090 aa18.69■□□□□ 0.58
SCARB2-210ENST00000638567 PPP1R1BQ9UD71 204 aaPredicted RBP18.69■□□□□ 0.58
SCARB2-210ENST00000638567 E9PCH4 1651 aa18.69■□□□□ 0.58
SCARB2-210ENST00000638567 SMC1AQ14683 1233 aaKnown RBP18.69■□□□□ 0.58
SCARB2-210ENST00000638567 CFAP74Q9C0B2 1584 aa18.69■□□□□ 0.58
SCARB2-210ENST00000638567 ARHGAP31Q2M1Z3 1444 aa18.69■□□□□ 0.58
SCARB2-210ENST00000638567 GOLGA6L10A0A0M3HER8 536 aa18.69■□□□□ 0.58
SCARB2-210ENST00000638567 PCCAP05165 728 aaPredicted RBP18.69■□□□□ 0.58
SCARB2-210ENST00000638567 TXKP42681 527 aa18.69■□□□□ 0.58
SCARB2-210ENST00000638567 NYXQ9GZU5 481 aa18.69■□□□□ 0.58
SCARB2-210ENST00000638567 ANKRD2Q9GZV1 360 aa18.69■□□□□ 0.58
SCARB2-210ENST00000638567 GBP2P32456 591 aaPredicted RBP18.68■□□□□ 0.58
SCARB2-210ENST00000638567 SLFNL1Q499Z3 407 aa18.68■□□□□ 0.58
SCARB2-210ENST00000638567 FAM47AQ5JRC9 791 aa18.68■□□□□ 0.58
SCARB2-210ENST00000638567 PSMB7Q99436 277 aa18.68■□□□□ 0.58
SCARB2-210ENST00000638567 GREM2Q9H772 168 aa18.68■□□□□ 0.58
SCARB2-210ENST00000638567 TFCP2L1Q9NZI6 479 aa18.68■□□□□ 0.58
SCARB2-210ENST00000638567 USP17L12C9JPN9 530 aa18.68■□□□□ 0.58
SCARB2-210ENST00000638567 USP17L21D6R901 530 aa18.68■□□□□ 0.58
SCARB2-210ENST00000638567 IGKV5-2P06315 115 aa18.68■□□□□ 0.58
SCARB2-210ENST00000638567 KIF23Q02241 960 aaPredicted RBP18.68■□□□□ 0.58
SCARB2-210ENST00000638567 CFAP58Q5T655 872 aa18.68■□□□□ 0.58
SCARB2-210ENST00000638567 PGBD1Q96JS3 809 aa18.68■□□□□ 0.58
SCARB2-210ENST00000638567 TNKSO95271 1327 aa18.68■□□□□ 0.58
SCARB2-210ENST00000638567 NLRP1Q9C000 1473 aa18.68■□□□□ 0.58
SCARB2-210ENST00000638567 TULP4Q9NRJ4 1543 aa18.67■□□□□ 0.58
SCARB2-210ENST00000638567 LAMC1P11047 1609 aa18.67■□□□□ 0.58
SCARB2-210ENST00000638567 RAPGEF1Q13905 1077 aa18.67■□□□□ 0.58
SCARB2-210ENST00000638567 IPO4Q8TEX9 1081 aaKnown RBP18.67■□□□□ 0.58
SCARB2-210ENST00000638567 GDAP1L1Q96MZ0 367 aa18.67■□□□□ 0.58
SCARB2-210ENST00000638567 CCNT1O60563 726 aaKnown RBP18.67■□□□□ 0.58
SCARB2-210ENST00000638567 BBXQ8WY36 941 aaPredicted RBP18.67■□□□□ 0.58
SCARB2-210ENST00000638567 FBXO3Q9UK99 471 aa18.67■□□□□ 0.58
SCARB2-210ENST00000638567 AIFM3Q96NN9 605 aa18.67■□□□□ 0.58
SCARB2-210ENST00000638567 EFCAB8A8MWE9 144 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 CCDC172P0C7W6 258 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 PLCG2P16885 1265 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 BCAMP50895 628 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 RNASE9P60153 205 aaKnown RBP18.66■□□□□ 0.58
SCARB2-210ENST00000638567 TBC1D5Q92609 795 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 PDE8BO95263 885 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 UBE3CQ15386 1083 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 CNNM4Q6P4Q7 775 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 TEX11Q8IYF3 940 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 TSGA10Q9BZW7 698 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.66■□□□□ 0.58
SCARB2-210ENST00000638567 PPP1R2P41236 205 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 CCDC24Q8N4L8 307 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 AFAP1L1Q8TED9 768 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 PUS7LQ9H0K6 701 aaKnown RBP18.66■□□□□ 0.58
SCARB2-210ENST00000638567 EHMT1Q9H9B1 1298 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 GJB4Q9NTQ9 266 aa18.66■□□□□ 0.58
SCARB2-210ENST00000638567 POLR1AO95602 1720 aaPredicted RBP18.66■□□□□ 0.58
SCARB2-210ENST00000638567 RASSF4Q9H2L5 321 aa18.65■□□□□ 0.58
SCARB2-210ENST00000638567 TRIML1Q8N9V2 468 aa18.65■□□□□ 0.58
SCARB2-210ENST00000638567 QRICH2Q9H0J4 1663 aa18.65■□□□□ 0.58
SCARB2-210ENST00000638567 CIAO1O76071 339 aa18.65■□□□□ 0.58
SCARB2-210ENST00000638567 ARID4AP29374 1257 aaPredicted RBP18.65■□□□□ 0.58
SCARB2-210ENST00000638567 TFAP4Q01664 338 aa18.65■□□□□ 0.58
SCARB2-210ENST00000638567 SECISBP2LQ93073 1101 aaKnown RBP18.65■□□□□ 0.58
SCARB2-210ENST00000638567 ST5P78524 1137 aa18.65■□□□□ 0.58
SCARB2-210ENST00000638567 ADGRB3O60242 1522 aa18.64■□□□□ 0.58
SCARB2-210ENST00000638567 ERBB3P21860 1342 aa18.64■□□□□ 0.58
SCARB2-210ENST00000638567 STX10O60499 249 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 MAGEA1P43355 309 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 C8orf74Q6P047 294 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 DYMQ7RTS9 669 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 OR8K1Q8NGG5 319 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 SMARCC2Q8TAQ2 1214 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 GPCPD1Q9NPB8 672 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 IKBKBO14920 756 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 EIF6P56537 245 aaKnown RBP18.64■□□□□ 0.57
SCARB2-210ENST00000638567 RABEP2Q9H5N1 569 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 SPTLC3Q9NUV7 552 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 SPDYE3A6NKU9 549 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 ATP1A3P13637 1013 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 TNNC1P63316 161 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 DCAF17Q5H9S7 520 aaPredicted RBP18.64■□□□□ 0.57
SCARB2-210ENST00000638567 SPATA1Q5VX52 437 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 OTUD6BQ8N6M0 293 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 NUP58Q9BVL2 599 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 CCDC87Q9NVE4 849 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 ARAP3Q8WWN8 1544 aa18.64■□□□□ 0.57
SCARB2-210ENST00000638567 PPP6R2O75170 966 aa18.63■□□□□ 0.57
SCARB2-210ENST00000638567 KRT13P13646 458 aa18.63■□□□□ 0.57
SCARB2-210ENST00000638567 GYG1P46976 350 aa18.63■□□□□ 0.57
SCARB2-210ENST00000638567 NONOQ15233 471 aaKnown RBP eCLIP18.63■□□□□ 0.57
SCARB2-210ENST00000638567 GPATCH11Q8N954 259 aa18.63■□□□□ 0.57
SCARB2-210ENST00000638567 LMBR1Q8WVP7 490 aa18.63■□□□□ 0.57
SCARB2-210ENST00000638567 CCDC51Q96ER9 411 aa18.63■□□□□ 0.57
SCARB2-210ENST00000638567 EEF2KMTQ96G04 330 aa18.63■□□□□ 0.57
SCARB2-210ENST00000638567 LRWD1Q9UFC0 647 aa18.63■□□□□ 0.57
SCARB2-210ENST00000638567 RTCBQ9Y3I0 505 aaKnown RBP18.63■□□□□ 0.57
SCARB2-210ENST00000638567 MED23Q9ULK4 1368 aa18.63■□□□□ 0.57
SCARB2-210ENST00000638567 IQSEC2Q5JU85 1478 aa18.63■□□□□ 0.57
SCARB2-210ENST00000638567 TLDC2A0PJX2 215 aa18.63■□□□□ 0.57
SCARB2-210ENST00000638567 KCNJ18B7U540 433 aa18.63■□□□□ 0.57
SCARB2-210ENST00000638567 KCNJ12Q14500 433 aa18.63■□□□□ 0.57
SCARB2-210ENST00000638567 CCDC65Q8IXS2 484 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms