RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 SLAIN1Q8ND83 568 aa24.41■■□□□ 1.5
CLN6-222ENST00000637667 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.41■■□□□ 1.5
CLN6-222ENST00000637667 ASCC2Q9H1I8 757 aaPredicted RBP24.41■■□□□ 1.5
CLN6-222ENST00000637667 BIN2Q9UBW5 565 aaPredicted RBP24.41■■□□□ 1.5
CLN6-222ENST00000637667 ZBTB21Q9ULJ3 1066 aa24.41■■□□□ 1.5
CLN6-222ENST00000637667 CDK5RAP2Q96SN8 1893 aa24.41■■□□□ 1.5
CLN6-222ENST00000637667 FLT3LGP49771 235 aa24.4■■□□□ 1.5
CLN6-222ENST00000637667 TMOD4Q9NZQ9 345 aa24.4■■□□□ 1.5
CLN6-222ENST00000637667 FOCADQ5VW36 1801 aa24.4■■□□□ 1.5
CLN6-222ENST00000637667 ATAD5Q96QE3 1844 aa24.4■■□□□ 1.5
CLN6-222ENST00000637667 LOC285556D6RIA3 1793 aa24.39■■□□□ 1.5
CLN6-222ENST00000637667 PDE6AP16499 860 aa24.39■■□□□ 1.49
CLN6-222ENST00000637667 UBXN2AP68543 259 aa24.39■■□□□ 1.49
CLN6-222ENST00000637667 RIOK1Q9BRS2 568 aaKnown RBP24.39■■□□□ 1.49
CLN6-222ENST00000637667 BCL11AQ9H165 835 aa24.39■■□□□ 1.49
CLN6-222ENST00000637667 C19orf81C9J6K1 198 aa24.38■■□□□ 1.49
CLN6-222ENST00000637667 USP17L10C9JJH3 530 aa24.38■■□□□ 1.49
CLN6-222ENST00000637667 GOLIM4O00461 696 aa24.38■■□□□ 1.49
CLN6-222ENST00000637667 ADCY3O60266 1144 aa24.38■■□□□ 1.49
CLN6-222ENST00000637667 CCL5P13501 91 aa24.38■■□□□ 1.49
CLN6-222ENST00000637667 PDE3AQ14432 1141 aa24.38■■□□□ 1.49
CLN6-222ENST00000637667 SLC9C2Q5TAH2 1124 aa24.38■■□□□ 1.49
CLN6-222ENST00000637667 C20orf194Q5TEA3 1177 aa24.38■■□□□ 1.49
CLN6-222ENST00000637667 TTC6Q86TZ1 520 aa24.38■■□□□ 1.49
CLN6-222ENST00000637667 COA7Q96BR5 231 aa24.38■■□□□ 1.49
CLN6-222ENST00000637667 DNAJC2Q99543 621 aaKnown RBP24.38■■□□□ 1.49
CLN6-222ENST00000637667 EHD4Q9H223 541 aa24.38■■□□□ 1.49
CLN6-222ENST00000637667 SERPINB13Q9UIV8 391 aa24.38■■□□□ 1.49
CLN6-222ENST00000637667 CEP290O15078 2479 aa24.38■■□□□ 1.49
CLN6-222ENST00000637667 MAGEB6P1A0A0J9YX57 407 aa24.37■■□□□ 1.49
CLN6-222ENST00000637667 IRX3P78415 501 aaPredicted RBP24.37■■□□□ 1.49
CLN6-222ENST00000637667 IRF5Q13568 498 aa24.37■■□□□ 1.49
CLN6-222ENST00000637667 SHISA4Q96DD7 197 aa24.37■■□□□ 1.49
CLN6-222ENST00000637667 MGAMO43451 1857 aa24.36■■□□□ 1.49
CLN6-222ENST00000637667 GH2P01242 217 aa24.36■■□□□ 1.49
CLN6-222ENST00000637667 GJB1P08034 283 aa24.36■■□□□ 1.49
CLN6-222ENST00000637667 HOXA7P31268 230 aaPredicted RBP24.36■■□□□ 1.49
CLN6-222ENST00000637667 TATDN1Q6P1N9 297 aa24.36■■□□□ 1.49
CLN6-222ENST00000637667 NKX2-3Q8TAU0 364 aa24.36■■□□□ 1.49
CLN6-222ENST00000637667 PXYLP1Q8TE99 480 aa24.36■■□□□ 1.49
CLN6-222ENST00000637667 RNF208Q9H0X6 261 aa24.36■■□□□ 1.49
CLN6-222ENST00000637667 ELNP15502 786 aa24.35■■□□□ 1.49
CLN6-222ENST00000637667 EDC3Q96F86 508 aaKnown RBP24.35■■□□□ 1.49
CLN6-222ENST00000637667 CRNKL1Q9BZJ0 848 aaKnown RBP24.35■■□□□ 1.49
CLN6-222ENST00000637667 ZNF532Q9HCE3 1301 aa24.35■■□□□ 1.49
CLN6-222ENST00000637667 GJA8P48165 433 aa24.34■■□□□ 1.49
CLN6-222ENST00000637667 P2RX7Q99572 595 aaKnown RBP24.34■■□□□ 1.49
CLN6-222ENST00000637667 MORF4L1Q9UBU8 362 aa24.34■■□□□ 1.49
CLN6-222ENST00000637667 TCRBV5S4A2TA0A5A2 114 aa24.33■■□□□ 1.49
CLN6-222ENST00000637667 INHAP05111 366 aa24.33■■□□□ 1.49
CLN6-222ENST00000637667 PLCD1P51178 756 aa24.33■■□□□ 1.49
CLN6-222ENST00000637667 USP17L2Q6R6M4 530 aa24.33■■□□□ 1.49
CLN6-222ENST00000637667 UNC93B1Q9H1C4 597 aa24.33■■□□□ 1.49
CLN6-222ENST00000637667 BOLA2Q9H3K6 86 aa24.33■■□□□ 1.49
CLN6-222ENST00000637667 EMILIN3Q9NT22 766 aa24.33■■□□□ 1.49
CLN6-222ENST00000637667 PAG1Q9NWQ8 432 aa24.33■■□□□ 1.49
CLN6-222ENST00000637667 TAOK2Q9UL54 1235 aa24.33■■□□□ 1.49
CLN6-222ENST00000637667 MYH1P12882 1939 aa24.33■■□□□ 1.49
CLN6-222ENST00000637667 DOCK3Q8IZD9 2030 aa24.32■■□□□ 1.48
CLN6-222ENST00000637667 POLR3DP05423 398 aaPredicted RBP24.32■■□□□ 1.48
CLN6-222ENST00000637667 ATP5JP18859 108 aa24.32■■□□□ 1.48
CLN6-222ENST00000637667 HERVK_113P62684 666 aa24.32■■□□□ 1.48
CLN6-222ENST00000637667 CERKLQ49MI3 558 aaPredicted RBP24.32■■□□□ 1.48
CLN6-222ENST00000637667 GCC1Q96CN9 775 aa24.32■■□□□ 1.48
CLN6-222ENST00000637667 SHMT1P34896 483 aa24.31■■□□□ 1.48
CLN6-222ENST00000637667 ABCB5Q2M3G0 1257 aa24.31■■□□□ 1.48
CLN6-222ENST00000637667 FEZ1Q99689 392 aa24.31■■□□□ 1.48
CLN6-222ENST00000637667 MCM9Q9NXL9 1143 aa24.31■■□□□ 1.48
CLN6-222ENST00000637667 GABPAQ06546 454 aa24.3■■□□□ 1.48
CLN6-222ENST00000637667 RAB3GAP1Q15042 981 aa24.3■■□□□ 1.48
CLN6-222ENST00000637667 LCORLQ8N3X6 602 aa24.3■■□□□ 1.48
CLN6-222ENST00000637667 U2AF1L4Q8WU68 220 aaKnown RBP24.3■■□□□ 1.48
CLN6-222ENST00000637667 C12orf42Q96LP6 360 aa24.3■■□□□ 1.48
CLN6-222ENST00000637667 HAUS7Q99871 368 aa24.3■■□□□ 1.48
CLN6-222ENST00000637667 LRRCC1Q9C099 1032 aa24.3■■□□□ 1.48
CLN6-222ENST00000637667 TXNRD2Q9NNW7 524 aa24.3■■□□□ 1.48
CLN6-222ENST00000637667 CABP5Q9NP86 173 aa24.3■■□□□ 1.48
CLN6-222ENST00000637667 GJD2Q9UKL4 321 aa24.3■■□□□ 1.48
CLN6-222ENST00000637667 GPRC5AQ8NFJ5 357 aa24.29■■□□□ 1.48
CLN6-222ENST00000637667 GTF3C2Q8WUA4 911 aaPredicted RBP24.29■■□□□ 1.48
CLN6-222ENST00000637667 SDR42E1Q8WUS8 393 aa24.29■■□□□ 1.48
CLN6-222ENST00000637667 DCP1AQ9NPI6 582 aaPredicted RBP24.29■■□□□ 1.48
CLN6-222ENST00000637667 PEX10O60683 326 aa24.28■■□□□ 1.48
CLN6-222ENST00000637667 ADD2P35612 726 aa24.28■■□□□ 1.48
CLN6-222ENST00000637667 ZYXQ15942 572 aaKnown RBP24.28■■□□□ 1.48
CLN6-222ENST00000637667 UBE2Q1Q7Z7E8 422 aa24.28■■□□□ 1.48
CLN6-222ENST00000637667 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.28■■□□□ 1.48
CLN6-222ENST00000637667 RBPJLQ9UBG7 517 aa24.28■■□□□ 1.48
CLN6-222ENST00000637667 SGPL1O95470 568 aa24.27■■□□□ 1.48
CLN6-222ENST00000637667 USP14P54578 494 aa24.27■■□□□ 1.48
CLN6-222ENST00000637667 SLFNL1Q499Z3 407 aa24.27■■□□□ 1.48
CLN6-222ENST00000637667 ACER1Q8TDN7 264 aa24.27■■□□□ 1.48
CLN6-222ENST00000637667 KIAA1683Q9H0B3 1180 aa24.27■■□□□ 1.48
CLN6-222ENST00000637667 ARMT1Q9H993 441 aa24.27■■□□□ 1.48
CLN6-222ENST00000637667 SMARCA5O60264 1052 aaPredicted RBP24.26■■□□□ 1.47
CLN6-222ENST00000637667 MBD4O95243 580 aa24.26■■□□□ 1.47
CLN6-222ENST00000637667 GUCY1A2P33402 732 aa24.26■■□□□ 1.47
CLN6-222ENST00000637667 EVX2Q03828 476 aa24.26■■□□□ 1.47
CLN6-222ENST00000637667 DDX60LQ5H9U9 1706 aaKnown RBP24.26■■□□□ 1.47
CLN6-222ENST00000637667 USP17L15C9J2P7 530 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms