RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 SCARA3Q6AZY7 606 aa5.38□□□□□ -1.55
CHD2-228ENST00000637613 BNC2Q6ZN30 1099 aaPredicted RBP5.38□□□□□ -1.55
CHD2-228ENST00000637613 LILRB2Q8N423 598 aa5.38□□□□□ -1.55
CHD2-228ENST00000637613 CELF2-AS1Q8N7Q2 184 aa5.38□□□□□ -1.55
CHD2-228ENST00000637613 OR6P1Q8NGX9 317 aa5.38□□□□□ -1.55
CHD2-228ENST00000637613 FBXO27Q8NI29 283 aa5.38□□□□□ -1.55
CHD2-228ENST00000637613 CPLX3Q8WVH0 158 aa5.38□□□□□ -1.55
CHD2-228ENST00000637613 TMEM40Q8WWA1 233 aa5.38□□□□□ -1.55
CHD2-228ENST00000637613 ZNRF3Q9ULT6 936 aa5.38□□□□□ -1.55
CHD2-228ENST00000637613 PCDHB5Q9Y5E4 795 aa5.38□□□□□ -1.55
CHD2-228ENST00000637613 U2SURPO15042 1029 aaKnown RBP5.37□□□□□ -1.55
CHD2-228ENST00000637613 CYP26A1O43174 497 aa5.37□□□□□ -1.55
CHD2-228ENST00000637613 CASP7P55210 303 aa5.37□□□□□ -1.55
CHD2-228ENST00000637613 EIF6P56537 245 aaKnown RBP5.37□□□□□ -1.55
CHD2-228ENST00000637613 RASGRF1Q13972 1273 aa5.37□□□□□ -1.55
CHD2-228ENST00000637613 DDR2Q16832 855 aa5.37□□□□□ -1.55
CHD2-228ENST00000637613 KIAA0907Q7Z7F0 614 aaPredicted RBP5.37□□□□□ -1.55
CHD2-228ENST00000637613 SIAH1Q8IUQ4 282 aa5.37□□□□□ -1.55
CHD2-228ENST00000637613 UBASH3BQ8TF42 649 aa5.37□□□□□ -1.55
CHD2-228ENST00000637613 FAM84AQ96KN4 292 aa5.37□□□□□ -1.55
CHD2-228ENST00000637613 NSUN5Q96P11 429 aaKnown RBP5.37□□□□□ -1.55
CHD2-228ENST00000637613 POP1Q99575 1024 aaKnown RBP5.37□□□□□ -1.55
CHD2-228ENST00000637613 RASSF4Q9H2L5 321 aa5.37□□□□□ -1.55
CHD2-228ENST00000637613 EHMT1Q9H9B1 1298 aa5.37□□□□□ -1.55
CHD2-228ENST00000637613 KANSL2Q9H9L4 492 aa5.37□□□□□ -1.55
CHD2-228ENST00000637613 CYP8B1Q9UNU6 501 aa5.37□□□□□ -1.55
CHD2-228ENST00000637613 NOP58Q9Y2X3 529 aaKnown RBP5.37□□□□□ -1.55
CHD2-228ENST00000637613 FSCN2O14926 492 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 RAB11FIP3O75154 756 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 ATE1O95260 518 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 B3GALT4O96024 378 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 NME2P22392 152 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 CFPP27918 469 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 ZNF165P49910 485 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 IGBP1P78318 339 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 MESP2Q0VG99 397 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 RNF187Q5TA31 235 aaPredicted RBP5.36□□□□□ -1.55
CHD2-228ENST00000637613 CCDC81Q6ZN84 652 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 LCNL1Q6ZST4 164 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 TTLL10Q6ZVT0 673 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 REC114Q7Z4M0 266 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 ATG4DQ86TL0 474 aaPredicted RBP5.36□□□□□ -1.55
CHD2-228ENST00000637613 ZCRB1Q8TBF4 217 aaKnown RBP5.36□□□□□ -1.55
CHD2-228ENST00000637613 SH3TC2Q8TF17 1288 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 FAM168AQ92567 244 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 GAL3ST3Q96A11 431 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 RNF208Q9H0X6 261 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 MIR1-1HGQ9H1L0 117 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 CLEC4MQ9H2X3 399 aaPredicted RBP5.36□□□□□ -1.55
CHD2-228ENST00000637613 IFT57Q9NWB7 429 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 CACNA2D2Q9NY47 1150 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 PRKAB1Q9Y478 270 aa5.36□□□□□ -1.55
CHD2-228ENST00000637613 PDPK1O15530 556 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 ADAM11O75078 769 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 IMPDH2P12268 514 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 ATP11AP98196 1134 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 ZNF252P-AS1Q0IIN9 211 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 ZNF423Q2M1K9 1284 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 CWF19L2Q2TBE0 894 aaKnown RBP5.35□□□□□ -1.55
CHD2-228ENST00000637613 ZNF792Q3KQV3 632 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 TXNDC11Q6PKC3 985 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 VN1R5Q7Z5H4 357 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 C1QL4Q86Z23 238 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 C19orf47Q8N9M1 422 aaKnown RBP5.35□□□□□ -1.55
CHD2-228ENST00000637613 ZSCAN18Q8TBC5 510 aaPredicted RBP5.35□□□□□ -1.55
CHD2-228ENST00000637613 STK35Q8TDR2 534 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 BSNDQ8WZ55 320 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 DNAJC7Q99615 494 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 CARD10Q9BWT7 1032 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 PCDH12Q9NPG4 1184 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 TMEM260Q9NX78 707 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 SOX13Q9UN79 622 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 SAMM50Q9Y512 469 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 COL4A3BPQ9Y5P4 624 aa5.35□□□□□ -1.55
CHD2-228ENST00000637613 hCG_2014768A0A024R1R8 64 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 TLR3O15455 904 aaKnown RBP5.34□□□□□ -1.55
CHD2-228ENST00000637613 GAS2O43903 313 aaKnown RBP5.34□□□□□ -1.55
CHD2-228ENST00000637613 ARNTP27540 789 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 CLCQ05315 142 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 PPP2R3AQ06190 1150 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 LRRC14Q15048 493 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 PLCL1Q15111 1095 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 SGO2Q562F6 1265 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 ARSHQ5FYA8 562 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 FAM117BQ6P1L5 589 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 FDX2Q6P4F2 183 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 ADAMTSL4Q6UY14 1074 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 PDZD3Q86UT5 571 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 LSRQ86X29 649 aaPredicted RBP5.34□□□□□ -1.55
CHD2-228ENST00000637613 MICAL1Q8TDZ2 1067 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 ADAM19Q9H013 955 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 TNKS2Q9H2K2 1166 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 BRMS1Q9HCU9 246 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 FANCLQ9NW38 375 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 ACTR10Q9NZ32 417 aa5.34□□□□□ -1.55
CHD2-228ENST00000637613 GPN3Q9UHW5 284 aaPredicted RBP5.34□□□□□ -1.55
CHD2-228ENST00000637613 R3HCC1Q9Y3T6 440 aaKnown RBP5.34□□□□□ -1.55
CHD2-228ENST00000637613 PRR36Q9H6K5 1346 aa5.33□□□□□ -1.56
CHD2-228ENST00000637613 DDX3YO15523 660 aaKnown RBP5.33□□□□□ -1.56
CHD2-228ENST00000637613 DNAJC6O75061 913 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms