RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 SMYD4Q8IYR2 804 aaPredicted RBP10.56□□□□□ -0.72
LINC01108-202ENST00000635227 GATAD2BQ8WXI9 593 aa10.56□□□□□ -0.72
LINC01108-202ENST00000635227 ISL2Q96A47 359 aa10.56□□□□□ -0.72
LINC01108-202ENST00000635227 PICK1Q9NRD5 415 aa10.56□□□□□ -0.72
LINC01108-202ENST00000635227 SNCAIPQ9Y6H5 919 aa10.56□□□□□ -0.72
LINC01108-202ENST00000635227 SRCAPQ6ZRS2 3230 aa10.56□□□□□ -0.72
LINC01108-202ENST00000635227 CILPO75339 1184 aa10.55□□□□□ -0.72
LINC01108-202ENST00000635227 RPL6Q02878 288 aaKnown RBP10.55□□□□□ -0.72
LINC01108-202ENST00000635227 PAOXQ6QHF9 649 aa10.55□□□□□ -0.72
LINC01108-202ENST00000635227 UBE3DQ7Z6J8 389 aa10.55□□□□□ -0.72
LINC01108-202ENST00000635227 KCNQ5Q9NR82 932 aa10.55□□□□□ -0.72
LINC01108-202ENST00000635227 GLI2P10070 1586 aa10.55□□□□□ -0.72
LINC01108-202ENST00000635227 ADAMTS12P58397 1594 aa10.55□□□□□ -0.72
LINC01108-202ENST00000635227 ADAM23O75077 832 aa10.54□□□□□ -0.72
LINC01108-202ENST00000635227 RACK1P63244 317 aaKnown RBP10.54□□□□□ -0.72
LINC01108-202ENST00000635227 NFIAQ12857 509 aa10.54□□□□□ -0.72
LINC01108-202ENST00000635227 MAP7Q14244 749 aa10.54□□□□□ -0.72
LINC01108-202ENST00000635227 RNF43Q68DV7 783 aa10.54□□□□□ -0.72
LINC01108-202ENST00000635227 SEZ6L2Q6UXD5 910 aa10.54□□□□□ -0.72
LINC01108-202ENST00000635227 FBXO27Q8NI29 283 aa10.54□□□□□ -0.72
LINC01108-202ENST00000635227 ZNF296Q8WUU4 475 aaPredicted RBP10.54□□□□□ -0.72
LINC01108-202ENST00000635227 FANCGO15287 622 aa10.53□□□□□ -0.72
LINC01108-202ENST00000635227 GREM1O60565 184 aa10.53□□□□□ -0.72
LINC01108-202ENST00000635227 FAM196AQ6ZSG2 479 aa10.53□□□□□ -0.72
LINC01108-202ENST00000635227 SHISA5Q8N114 240 aa10.53□□□□□ -0.72
LINC01108-202ENST00000635227 MFSD14AQ96MC6 490 aa10.53□□□□□ -0.72
LINC01108-202ENST00000635227 C1GALT1Q9NS00 363 aa10.53□□□□□ -0.72
LINC01108-202ENST00000635227 PRKAG2Q9UGJ0 569 aa10.53□□□□□ -0.72
LINC01108-202ENST00000635227 DDX41Q9UJV9 622 aaKnown RBP10.53□□□□□ -0.72
LINC01108-202ENST00000635227 IGLV1-40P01703 118 aa10.52□□□□□ -0.73
LINC01108-202ENST00000635227 NT5DC4Q86YG4 428 aa10.52□□□□□ -0.73
LINC01108-202ENST00000635227 SSU72Q9NP77 194 aaKnown RBP10.52□□□□□ -0.73
LINC01108-202ENST00000635227 PCOLCE2Q9UKZ9 415 aa10.52□□□□□ -0.73
LINC01108-202ENST00000635227 SUPT16HQ9Y5B9 1047 aaKnown RBP10.52□□□□□ -0.73
LINC01108-202ENST00000635227 NUP160Q12769 1436 aa10.51□□□□□ -0.73
LINC01108-202ENST00000635227 GRIN2AQ12879 1464 aa10.51□□□□□ -0.73
LINC01108-202ENST00000635227 TLR3O15455 904 aaKnown RBP10.51□□□□□ -0.73
LINC01108-202ENST00000635227 BPNT1O95861 308 aa10.51□□□□□ -0.73
LINC01108-202ENST00000635227 ADMP35318 185 aa10.51□□□□□ -0.73
LINC01108-202ENST00000635227 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.51□□□□□ -0.73
LINC01108-202ENST00000635227 DBNDD2Q9BQY9 259 aa10.51□□□□□ -0.73
LINC01108-202ENST00000635227 WNT10AQ9GZT5 417 aa10.51□□□□□ -0.73
LINC01108-202ENST00000635227 FHAD1B1AJZ9 1412 aa10.5□□□□□ -0.73
LINC01108-202ENST00000635227 IQSEC2Q5JU85 1478 aa10.5□□□□□ -0.73
LINC01108-202ENST00000635227 EFCAB5A4FU69 1503 aa10.5□□□□□ -0.73
LINC01108-202ENST00000635227 GRK4P32298 578 aa10.5□□□□□ -0.73
LINC01108-202ENST00000635227 CRKP46108 304 aa10.5□□□□□ -0.73
LINC01108-202ENST00000635227 ETF1P62495 437 aaKnown RBP10.5□□□□□ -0.73
LINC01108-202ENST00000635227 FBXL6Q8N531 539 aa10.5□□□□□ -0.73
LINC01108-202ENST00000635227 GATA6Q92908 595 aa10.5□□□□□ -0.73
LINC01108-202ENST00000635227 TBC1D32Q96NH3 1257 aa10.5□□□□□ -0.73
LINC01108-202ENST00000635227 SPON2Q9BUD6 331 aa10.5□□□□□ -0.73
LINC01108-202ENST00000635227 FBRSQ9HAH7 460 aa10.5□□□□□ -0.73
LINC01108-202ENST00000635227 UBP1Q9NZI7 540 aa10.5□□□□□ -0.73
LINC01108-202ENST00000635227 E9PSI1 815 aa10.49□□□□□ -0.73
LINC01108-202ENST00000635227 CDK5R2Q13319 367 aa10.49□□□□□ -0.73
LINC01108-202ENST00000635227 MPP2Q14168 576 aa10.49□□□□□ -0.73
LINC01108-202ENST00000635227 CORINQ9Y5Q5 1042 aa10.49□□□□□ -0.73
LINC01108-202ENST00000635227 PRG4Q92954 1404 aaPredicted RBP10.49□□□□□ -0.73
LINC01108-202ENST00000635227 GSC2O15499 205 aa10.48□□□□□ -0.73
LINC01108-202ENST00000635227 F13BP05160 661 aa10.48□□□□□ -0.73
LINC01108-202ENST00000635227 TCF3P15923 654 aa10.48□□□□□ -0.73
LINC01108-202ENST00000635227 DIEXFQ68CQ4 756 aaKnown RBP10.48□□□□□ -0.73
LINC01108-202ENST00000635227 CDC37L1Q7L3B6 337 aa10.48□□□□□ -0.73
LINC01108-202ENST00000635227 REC114Q7Z4M0 266 aa10.48□□□□□ -0.73
LINC01108-202ENST00000635227 ZAR1Q86SH2 424 aa10.48□□□□□ -0.73
LINC01108-202ENST00000635227 KIAA0825Q8IV33 1275 aa10.48□□□□□ -0.73
LINC01108-202ENST00000635227 SHKBP1Q8TBC3 707 aa10.48□□□□□ -0.73
LINC01108-202ENST00000635227 ZNF507Q8TCN5 953 aa10.48□□□□□ -0.73
LINC01108-202ENST00000635227 EAF1Q96JC9 268 aaPredicted RBP10.48□□□□□ -0.73
LINC01108-202ENST00000635227 POLR3KQ9Y2Y1 108 aaPredicted RBP10.48□□□□□ -0.73
LINC01108-202ENST00000635227 CARMIL1Q5VZK9 1371 aa10.48□□□□□ -0.73
LINC01108-202ENST00000635227 GRIN3BO60391 1043 aa10.47□□□□□ -0.73
LINC01108-202ENST00000635227 NKG7Q16617 165 aa10.47□□□□□ -0.73
LINC01108-202ENST00000635227 PSMG3-AS1Q96PY0 264 aa10.47□□□□□ -0.73
LINC01108-202ENST00000635227 LRRC3Q9BY71 257 aa10.47□□□□□ -0.73
LINC01108-202ENST00000635227 TACC3Q9Y6A5 838 aa10.47□□□□□ -0.73
LINC01108-202ENST00000635227 MAP3K4Q9Y6R4 1608 aa10.47□□□□□ -0.73
LINC01108-202ENST00000635227 CFAP43Q8NDM7 1665 aa10.47□□□□□ -0.73
LINC01108-202ENST00000635227 FAM170BA6NMN3 283 aa10.46□□□□□ -0.73
LINC01108-202ENST00000635227 WDR64B1ANS9 1081 aa10.46□□□□□ -0.73
LINC01108-202ENST00000635227 PGRP06401 933 aa10.46□□□□□ -0.73
LINC01108-202ENST00000635227 RAD51AP2Q09MP3 1159 aa10.46□□□□□ -0.73
LINC01108-202ENST00000635227 ZDHHC13Q8IUH4 622 aa10.46□□□□□ -0.73
LINC01108-202ENST00000635227 ZNF654Q8IZM8 581 aa10.46□□□□□ -0.73
LINC01108-202ENST00000635227 ROBO2Q9HCK4 1378 aa10.46□□□□□ -0.74
LINC01108-202ENST00000635227 STRCQ7RTU9 1775 aa10.45□□□□□ -0.74
LINC01108-202ENST00000635227 LTBP4Q8N2S1 1624 aa10.45□□□□□ -0.74
LINC01108-202ENST00000635227 MADDQ8WXG6 1647 aa10.45□□□□□ -0.74
LINC01108-202ENST00000635227 TEX14Q8IWB6 1497 aa10.45□□□□□ -0.74
LINC01108-202ENST00000635227 APOBRQ0VD83 1088 aa10.45□□□□□ -0.74
LINC01108-202ENST00000635227 SLBPQ14493 270 aaKnown RBP eCLIP10.45□□□□□ -0.74
LINC01108-202ENST00000635227 SLC51AQ86UW1 340 aa10.45□□□□□ -0.74
LINC01108-202ENST00000635227 KCT2Q8NC54 265 aa10.45□□□□□ -0.74
LINC01108-202ENST00000635227 NT5C1AQ9BXI3 368 aa10.45□□□□□ -0.74
LINC01108-202ENST00000635227 BRMS1Q9HCU9 246 aa10.45□□□□□ -0.74
LINC01108-202ENST00000635227 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.45□□□□□ -0.74
LINC01108-202ENST00000635227 MAP3K1Q13233 1512 aa10.44□□□□□ -0.74
LINC01108-202ENST00000635227 CWF19L2Q2TBE0 894 aaKnown RBP10.44□□□□□ -0.74
LINC01108-202ENST00000635227 SEZ6Q53EL9 994 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms