RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 STK38LQ9Y2H1 464 aa10.12□□□□□ -0.79
CSMD1-218ENST00000635120 CALCRLQ16602 461 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 CFAP221Q4G0U5 840 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 TTC38Q5R3I4 469 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 LLPHQ9BRT6 129 aaKnown RBP10.11□□□□□ -0.79
CSMD1-218ENST00000635120 TTLL3Q9Y4R7 772 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 FLT4P35916 1363 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 ARHGEF35A5YM69 484 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 KRT71Q3SY84 523 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 SLC9C1Q4G0N8 1177 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 SYCE1Q8N0S2 351 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 PLEKHA4Q9H4M7 779 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 CLEC11AQ9Y240 323 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 RBM26Q5T8P6 1007 aaKnown RBP10.11□□□□□ -0.79
CSMD1-218ENST00000635120 HELLSQ9NRZ9 838 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 TNNQ9UQP3 1299 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 A6NNZ2 444 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 CEBPAP49715 358 aaPredicted RBP10.11□□□□□ -0.79
CSMD1-218ENST00000635120 STRN3Q13033 797 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 TUBB8Q3ZCM7 444 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 NAP1L4Q99733 375 aaKnown RBP10.11□□□□□ -0.79
CSMD1-218ENST00000635120 UGGT2Q9NYU1 1516 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 GUCY2FP51841 1108 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 BSPRYQ5W0U4 402 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 TEX11Q8IYF3 940 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.11□□□□□ -0.79
CSMD1-218ENST00000635120 EIF6P56537 245 aaKnown RBP10.11□□□□□ -0.79
CSMD1-218ENST00000635120 ZBTB40Q9NUA8 1239 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 PHKBQ93100 1093 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 MTMR3Q13615 1198 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 GSDMBQ8TAX9 411 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 SLF1Q9BQI6 1058 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 WWC3Q9ULE0 1092 aa10.11□□□□□ -0.79
CSMD1-218ENST00000635120 KRT15P19012 456 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 GBP5Q96PP8 586 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 IMPACTQ9P2X3 320 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 DENND4BO75064 1496 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-218ENST00000635120 NLRP12P59046 1061 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 NSFL1CQ9UNZ2 370 aaKnown RBP10.1□□□□□ -0.79
CSMD1-218ENST00000635120 EXOC7Q9UPT5 735 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 GCNT3O95395 438 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 PUM3Q15397 648 aaKnown RBP10.1□□□□□ -0.79
CSMD1-218ENST00000635120 TSPYL6Q8N831 410 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 OTUD7AQ8TE49 926 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-218ENST00000635120 PPP1R2P41236 205 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 GABPB1Q06547 395 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-218ENST00000635120 MAEAQ7L5Y9 396 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 PICK1Q9NRD5 415 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 NFE2L3Q9Y4A8 694 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 NOP56O00567 594 aaKnown RBP10.1□□□□□ -0.79
CSMD1-218ENST00000635120 CCDC125Q86Z20 511 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 TMTC1Q8IUR5 882 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 RNF10Q8N5U6 811 aaKnown RBP10.1□□□□□ -0.79
CSMD1-218ENST00000635120 NUP58Q9BVL2 599 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 TRIM68Q6AZZ1 485 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 GINS2Q9Y248 185 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 RPS6KA1Q15418 735 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 NCAPH2Q6IBW4 605 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 GABPB2Q8TAK5 448 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-218ENST00000635120 ZC3H12CQ9C0D7 883 aaKnown RBP10.1□□□□□ -0.79
CSMD1-218ENST00000635120 URB1O60287 2271 aaKnown RBP10.1□□□□□ -0.79
CSMD1-218ENST00000635120 TYW1BQ6NUM6 668 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 AFG3L2Q9Y4W6 797 aa10.1□□□□□ -0.79
CSMD1-218ENST00000635120 TCHHQ07283 1943 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 RGS16O15492 202 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-218ENST00000635120 CDC37L1Q7L3B6 337 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 CADPS2Q86UW7 1296 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 DDX27Q96GQ7 796 aaKnown RBP10.09□□□□□ -0.79
CSMD1-218ENST00000635120 RABGAP1Q9Y3P9 1069 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 ARHGAP6O43182 974 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 SESN3P58005 492 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 PLXNC1O60486 1568 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 TNRQ92752 1358 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 RILPQ96NA2 401 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 DDX21Q9NR30 783 aaKnown RBP eCLIP10.09□□□□□ -0.79
CSMD1-218ENST00000635120 DDX41Q9UJV9 622 aaKnown RBP10.09□□□□□ -0.79
CSMD1-218ENST00000635120 DDX39AO00148 427 aaKnown RBP10.09□□□□□ -0.79
CSMD1-218ENST00000635120 KRT24Q2M2I5 525 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 TACO1Q9BSH4 297 aaKnown RBP10.09□□□□□ -0.79
CSMD1-218ENST00000635120 ARHGEF10LQ9HCE6 1279 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 TSKSQ9UJT2 592 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 NUP160Q12769 1436 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 SND1Q7KZF4 910 aaKnown RBP eCLIP10.09□□□□□ -0.79
CSMD1-218ENST00000635120 CDAN1Q8IWY9 1227 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 CNTRLQ7Z7A1 2325 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 VPS37BQ9H9H4 285 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 POLR3AO14802 1390 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-218ENST00000635120 AOX1Q06278 1338 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 GADD45BO75293 160 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-218ENST00000635120 IL2RBP14784 551 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 DIXDC1Q155Q3 683 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 MUM1Q2TAK8 710 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 C2CD5Q86YS7 1000 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 PPP4R1Q8TF05 950 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 C8orf37Q96NL8 207 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 KRT12Q99456 494 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 V9GY48 417 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-218ENST00000635120 IBTKQ9P2D0 1353 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-218ENST00000635120 MAP7Q14244 749 aa10.09□□□□□ -0.79
CSMD1-218ENST00000635120 NACA2Q9H009 215 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms