RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 TMEM87AQ8NBN3 555 aa5.69□□□□□ -1.5
SRP54-214ENST00000630962 TMEM87BQ96K49 555 aa5.69□□□□□ -1.5
SRP54-214ENST00000630962 MIPEPQ99797 713 aa5.69□□□□□ -1.5
SRP54-214ENST00000630962 TNKS2Q9H2K2 1166 aa5.69□□□□□ -1.5
SRP54-214ENST00000630962 KCNQ5Q9NR82 932 aa5.69□□□□□ -1.5
SRP54-214ENST00000630962 GGT7Q9UJ14 662 aa5.69□□□□□ -1.5
SRP54-214ENST00000630962 PRR36Q9H6K5 1346 aa5.69□□□□□ -1.5
SRP54-214ENST00000630962 PLCG1P19174 1290 aa5.68□□□□□ -1.5
SRP54-214ENST00000630962 EIF4A3P38919 411 aaKnown RBP5.68□□□□□ -1.5
SRP54-214ENST00000630962 FAM196AQ6ZSG2 479 aa5.68□□□□□ -1.5
SRP54-214ENST00000630962 GOLM1Q8NBJ4 401 aa5.68□□□□□ -1.5
SRP54-214ENST00000630962 BCL7CQ8WUZ0 217 aaPredicted RBP5.68□□□□□ -1.5
SRP54-214ENST00000630962 LRRC3Q9BY71 257 aa5.68□□□□□ -1.5
SRP54-214ENST00000630962 COL17A1Q9UMD9 1497 aaPredicted RBP5.67□□□□□ -1.5
SRP54-214ENST00000630962 MINDY4BA8MYZ0 360 aa5.67□□□□□ -1.5
SRP54-214ENST00000630962 FAM155AB1AL88 458 aaPredicted RBP5.67□□□□□ -1.5
SRP54-214ENST00000630962 SLITRK5O94991 958 aa5.67□□□□□ -1.5
SRP54-214ENST00000630962 EOMESO95936 686 aa5.67□□□□□ -1.5
SRP54-214ENST00000630962 F13A1P00488 732 aa5.67□□□□□ -1.5
SRP54-214ENST00000630962 ZNF865P0CJ78 1059 aaPredicted RBP5.67□□□□□ -1.5
SRP54-214ENST00000630962 ZNF76P36508 570 aa5.67□□□□□ -1.5
SRP54-214ENST00000630962 CHMP4BP1P59074 171 aa5.67□□□□□ -1.5
SRP54-214ENST00000630962 ANGEL2Q5VTE6 544 aaKnown RBP5.67□□□□□ -1.5
SRP54-214ENST00000630962 PRAMEF13Q5VWM6 474 aa5.67□□□□□ -1.5
SRP54-214ENST00000630962 BNC2Q6ZN30 1099 aaPredicted RBP5.67□□□□□ -1.5
SRP54-214ENST00000630962 FAM214BQ7L5A3 538 aa5.67□□□□□ -1.5
SRP54-214ENST00000630962 PLD6Q8N2A8 252 aaKnown RBP5.67□□□□□ -1.5
SRP54-214ENST00000630962 PIWIL2Q8TC59 973 aaKnown RBP5.67□□□□□ -1.5
SRP54-214ENST00000630962 CCDC120Q96HB5 630 aa5.67□□□□□ -1.5
SRP54-214ENST00000630962 HEXIM2Q96MH2 286 aaKnown RBP5.67□□□□□ -1.5
SRP54-214ENST00000630962 FBRSQ9HAH7 460 aa5.67□□□□□ -1.5
SRP54-214ENST00000630962 KBTBD4Q9NVX7 518 aa5.67□□□□□ -1.5
SRP54-214ENST00000630962 OAS3Q9Y6K5 1087 aaKnown RBP5.67□□□□□ -1.5
SRP54-214ENST00000630962 BIN1O00499 593 aa5.66□□□□□ -1.5
SRP54-214ENST00000630962 PAX4O43316 350 aa5.66□□□□□ -1.5
SRP54-214ENST00000630962 NKG7Q16617 165 aa5.66□□□□□ -1.5
SRP54-214ENST00000630962 AOC3Q16853 763 aa5.66□□□□□ -1.5
SRP54-214ENST00000630962 REC114Q7Z4M0 266 aa5.66□□□□□ -1.5
SRP54-214ENST00000630962 THAP5Q7Z6K1 395 aa5.66□□□□□ -1.5
SRP54-214ENST00000630962 SLFN12Q8IYM2 578 aa5.66□□□□□ -1.5
SRP54-214ENST00000630962 MFSD4AQ8N468 514 aa5.66□□□□□ -1.5
SRP54-214ENST00000630962 FAM181AQ8N9Y4 354 aa5.66□□□□□ -1.5
SRP54-214ENST00000630962 CYB5D2Q8WUJ1 264 aa5.66□□□□□ -1.5
SRP54-214ENST00000630962 LMCD1Q9NZU5 365 aa5.66□□□□□ -1.5
SRP54-214ENST00000630962 TJP2Q9UDY2 1190 aa5.66□□□□□ -1.5
SRP54-214ENST00000630962 CEP131Q9UPN4 1083 aa5.66□□□□□ -1.5
SRP54-214ENST00000630962 CCDC9Q9Y3X0 531 aaKnown RBP5.66□□□□□ -1.5
SRP54-214ENST00000630962 GREM1O60565 184 aa5.65□□□□□ -1.5
SRP54-214ENST00000630962 JUNBP17275 347 aaPredicted RBP5.65□□□□□ -1.5
SRP54-214ENST00000630962 ITIH2P19823 946 aa5.65□□□□□ -1.5
SRP54-214ENST00000630962 CDK8P49336 464 aa5.65□□□□□ -1.5
SRP54-214ENST00000630962 LRRFIP1Q32MZ4 808 aaKnown RBP5.65□□□□□ -1.5
SRP54-214ENST00000630962 MCTP1Q6DN14 999 aa5.65□□□□□ -1.5
SRP54-214ENST00000630962 UBE3DQ7Z6J8 389 aa5.65□□□□□ -1.5
SRP54-214ENST00000630962 REXO1Q8N1G1 1221 aaKnown RBP5.65□□□□□ -1.5
SRP54-214ENST00000630962 FAM13CQ8NE31 585 aa5.65□□□□□ -1.5
SRP54-214ENST00000630962 RNF34Q969K3 372 aa5.65□□□□□ -1.5
SRP54-214ENST00000630962 ACSF2Q96CM8 615 aaPredicted RBP5.65□□□□□ -1.5
SRP54-214ENST00000630962 PAK6Q9NQU5 681 aaPredicted RBP5.65□□□□□ -1.5
SRP54-214ENST00000630962 KCNH3Q9ULD8 1083 aa5.65□□□□□ -1.5
SRP54-214ENST00000630962 SCAMP3O14828 347 aaKnown RBP5.64□□□□□ -1.51
SRP54-214ENST00000630962 FUT4P22083 530 aa5.64□□□□□ -1.51
SRP54-214ENST00000630962 ZNF165P49910 485 aa5.64□□□□□ -1.51
SRP54-214ENST00000630962 FAM160A1Q05DH4 1040 aa5.64□□□□□ -1.51
SRP54-214ENST00000630962 RAD51AP2Q09MP3 1159 aa5.64□□□□□ -1.51
SRP54-214ENST00000630962 TRIM26Q12899 539 aaPredicted RBP5.64□□□□□ -1.51
SRP54-214ENST00000630962 PLCL1Q15111 1095 aa5.64□□□□□ -1.51
SRP54-214ENST00000630962 SPACA3Q8IXA5 215 aa5.64□□□□□ -1.51
SRP54-214ENST00000630962 ABI1Q8IZP0 508 aa5.64□□□□□ -1.51
SRP54-214ENST00000630962 ZNF296Q8WUU4 475 aaPredicted RBP5.64□□□□□ -1.51
SRP54-214ENST00000630962 SPATA32Q96LK8 384 aa5.64□□□□□ -1.51
SRP54-214ENST00000630962 CCDC74BQ96LY2 380 aa5.64□□□□□ -1.51
SRP54-214ENST00000630962 NT5C1AQ9BXI3 368 aa5.64□□□□□ -1.51
SRP54-214ENST00000630962 BACH2Q9BYV9 841 aa5.64□□□□□ -1.51
SRP54-214ENST00000630962 TRIT1Q9H3H1 467 aaKnown RBP5.64□□□□□ -1.51
SRP54-214ENST00000630962 REV1Q9UBZ9 1251 aa5.64□□□□□ -1.51
SRP54-214ENST00000630962 ADGRE2Q9UHX3 823 aa5.64□□□□□ -1.51
SRP54-214ENST00000630962 PLAGL2Q9UPG8 496 aa5.64□□□□□ -1.51
SRP54-214ENST00000630962 ADAMTS4O75173 837 aa5.63□□□□□ -1.51
SRP54-214ENST00000630962 ATE1O95260 518 aa5.63□□□□□ -1.51
SRP54-214ENST00000630962 HTR3BO95264 441 aa5.63□□□□□ -1.51
SRP54-214ENST00000630962 GARTP22102 1010 aa5.63□□□□□ -1.51
SRP54-214ENST00000630962 FBXL19Q6PCT2 694 aa5.63□□□□□ -1.51
SRP54-214ENST00000630962 SLC23A3Q6PIS1 610 aa5.63□□□□□ -1.51
SRP54-214ENST00000630962 KIAA0825Q8IV33 1275 aa5.63□□□□□ -1.51
SRP54-214ENST00000630962 PI4K2BQ8TCG2 481 aa5.63□□□□□ -1.51
SRP54-214ENST00000630962 ASIC4Q96FT7 647 aa5.63□□□□□ -1.51
SRP54-214ENST00000630962 CD8BP10966 210 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 IMPDH2P12268 514 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 CCNFP41002 786 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 TNNI2P48788 182 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 APOBRQ0VD83 1088 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 IKZF1Q13422 519 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 NKPD1Q17RQ9 610 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 CBLL1Q75N03 491 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 TMPRSS7Q7RTY8 843 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 XAGE3Q8WTP9 111 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 SPON2Q9BUD6 331 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 ASPNQ9BXN1 380 aa5.62□□□□□ -1.51
SRP54-214ENST00000630962 EHMT1Q9H9B1 1298 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms