RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 RPN1P04843 607 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 PYGLP06737 847 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 IFIT2P09913 472 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 TGFB3P10600 412 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 YY1P25490 414 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 CYP2C19P33261 490 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 AP2B1P63010 937 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 SLFN5Q08AF3 891 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 SMYD5Q6GMV2 418 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 PCGF5Q86SE9 256 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 ZNF713Q8N859 430 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 ANKRD42Q8N9B4 389 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 MIEF2Q96C03 454 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 DHTKD1Q96HY7 919 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 HDAC6Q9UBN7 1215 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 SLC45A1Q9Y2W3 748 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 PIK3C2BO00750 1634 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 RIMS1Q86UR5 1692 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 PRDM15P57071 1507 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 TMEM110-MUSTN1A8MSY1 372 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 RASA4BC9J798 803 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 STAM2O75886 525 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 SERPINC1P01008 464 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 RHOXF2BP0C7M4 288 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 KRT13P13646 458 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 FAM47EQ6ZV65 393 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 ZNF354CQ86Y25 554 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 HAUS7Q99871 368 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 RHOXF2Q9BQY4 288 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 IER2Q9BTL4 223 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 PIF1Q9H611 641 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 LMBRD1Q9NUN5 540 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 CFDP1Q9UEE9 299 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 HOOK1Q9UJC3 728 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 SETD1AO15047 1707 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 ANKRD30BQ9BXX2 1392 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 MADDQ8WXG6 1647 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 AKR1B10O60218 316 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 DIAPH2O60879 1101 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 STAMBPO95630 424 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 PECAM1P16284 738 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 GCFC2P16383 781 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 KRT20P35900 424 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 GUCY1B3Q02153 619 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 ITIH3Q06033 890 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 GKAP1Q5VSY0 366 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 SFMBT2Q5VUG0 894 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 EGFLAMQ63HQ2 1017 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 CCDC112Q8NEF3 446 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 ATP6V0A1Q93050 837 aa4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 PAPOLBQ9NRJ5 636 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-220ENST00000628915 SUPT6HQ7KZ85 1726 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 GTPBP10A4D1E9 387 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 NDUFAB1O14561 156 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 RASA4O43374 803 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 SGTAO43765 313 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 NEMFO60524 1076 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 PRPF40AO75400 957 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 EZRP15311 586 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 MARSP56192 900 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 NCBP1Q09161 790 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 NFX1Q12986 1120 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 Q3C1V9 767 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 GRAMD1BQ3KR37 738 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 TSHZ3Q63HK5 1081 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 MMTAG2Q9BU76 263 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 CCSER2Q9H7U1 834 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 PDRG1Q9NUG6 133 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 GTF3C4Q9UKN8 822 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 NDC80O14777 642 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 TRIM66O15016 1216 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 FANCAO15360 1455 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 PLCH2O75038 1416 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 TROVE2P10155 538 aaKnown RBP eCLIP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 PTPRGP23470 1445 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 CNGA1P29973 690 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 GSCP56915 257 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 BASP1P80723 227 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 TMF1P82094 1093 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 ICA1Q05084 483 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 PDE1CQ14123 709 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 WASHC4Q2M389 1173 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 TNNI3KQ59H18 835 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 CCDC30Q5VVM6 783 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 RASGRP2Q7LDG7 609 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 GPIHBP1Q8IV16 184 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 VCPKMTQ9H867 229 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 GINM1Q9NU53 330 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 ITGB1BP2Q9UKP3 347 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 UGGT1Q9NYU2 1555 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 GOLGA6L7A0A1B0GV03 622 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 SYCE3A1L190 88 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 PRSS47A8MTI9 375 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 TMEM127O75204 238 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 CUL4BQ13620 913 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 TUBA3CQ13748 450 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 ARHGEF6Q15052 776 aa4.36□□□□□ -1.71
R3HDM1-220ENST00000628915 CNGA3Q16281 694 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms