RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 STRCP1A6NGW2 1772 aa14.15□□□□□ -0.14
LITAF-221ENST00000622633 COL5A2P05997 1499 aaPredicted RBP14.15□□□□□ -0.14
LITAF-221ENST00000622633 ANKRD18BA2A2Z9 1011 aa14.15□□□□□ -0.14
LITAF-221ENST00000622633 CMA1P23946 247 aa14.15□□□□□ -0.14
LITAF-221ENST00000622633 NLRP10Q86W26 655 aa14.15□□□□□ -0.14
LITAF-221ENST00000622633 CTCFLQ8NI51 663 aaPredicted RBP14.15□□□□□ -0.14
LITAF-221ENST00000622633 PHKBQ93100 1093 aa14.15□□□□□ -0.14
LITAF-221ENST00000622633 XPO4Q9C0E2 1151 aaKnown RBP14.15□□□□□ -0.14
LITAF-221ENST00000622633 ANGEL1Q9UNK9 670 aaKnown RBP14.15□□□□□ -0.14
LITAF-221ENST00000622633 EME2A4GXA9 379 aaPredicted RBP14.15□□□□□ -0.14
LITAF-221ENST00000622633 B4E1Z4 1266 aa14.15□□□□□ -0.14
LITAF-221ENST00000622633 STARD3NLO95772 234 aa14.15□□□□□ -0.14
LITAF-221ENST00000622633 METAP2P50579 478 aaKnown RBP eCLIP14.15□□□□□ -0.14
LITAF-221ENST00000622633 NLRP12P59046 1061 aa14.15□□□□□ -0.14
LITAF-221ENST00000622633 FBXW10Q5XX13 1052 aa14.15□□□□□ -0.14
LITAF-221ENST00000622633 GIGYF2Q6Y7W6 1299 aaKnown RBP14.15□□□□□ -0.14
LITAF-221ENST00000622633 CCAR2Q8N163 923 aaKnown RBP14.15□□□□□ -0.14
LITAF-221ENST00000622633 TRIM6Q9C030 488 aaPredicted RBP14.15□□□□□ -0.14
LITAF-221ENST00000622633 MROH7-TTC4A0A0A0MT08 1334 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 ZMYM6O95789 1325 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 MAP3K15Q6ZN16 1313 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 WDR19Q8NEZ3 1342 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 ZNF532Q9HCE3 1301 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 SH2B2O14492 632 aaPredicted RBP14.14□□□□□ -0.15
LITAF-221ENST00000622633 ECM2O94769 699 aaPredicted RBP14.14□□□□□ -0.15
LITAF-221ENST00000622633 CDC27P30260 824 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 PHKA1P46020 1223 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 SLC39A14Q15043 492 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 UBXN4Q92575 508 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 N4BP2L2Q92802 583 aaPredicted RBP14.14□□□□□ -0.15
LITAF-221ENST00000622633 FUT8Q9BYC5 575 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 RTN2O75298 545 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 EIF5P55010 431 aaKnown RBP14.14□□□□□ -0.15
LITAF-221ENST00000622633 CTSWP56202 376 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 GSDMDP57764 484 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 KRT40Q6A162 431 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 TMC6Q7Z403 805 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 MICU3Q86XE3 530 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 KLHL23Q8NBE8 558 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 HELBQ8NG08 1087 aaPredicted RBP14.14□□□□□ -0.15
LITAF-221ENST00000622633 BPIFA3Q9BQP9 254 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 OSBPL5Q9H0X9 879 aaPredicted RBP14.14□□□□□ -0.15
LITAF-221ENST00000622633 WWC3Q9ULE0 1092 aa14.14□□□□□ -0.15
LITAF-221ENST00000622633 ABCC12Q96J65 1359 aa14.13□□□□□ -0.15
LITAF-221ENST00000622633 IRS4O14654 1257 aaPredicted RBP14.13□□□□□ -0.15
LITAF-221ENST00000622633 NCAPHQ15003 741 aa14.13□□□□□ -0.15
LITAF-221ENST00000622633 VPS37DQ86XT2 251 aa14.13□□□□□ -0.15
LITAF-221ENST00000622633 SH3GL3Q99963 347 aa14.13□□□□□ -0.15
LITAF-221ENST00000622633 MYL10Q9BUA6 226 aa14.13□□□□□ -0.15
LITAF-221ENST00000622633 PDE6AP16499 860 aa14.13□□□□□ -0.15
LITAF-221ENST00000622633 CCDC102BQ68D86 513 aa14.13□□□□□ -0.15
LITAF-221ENST00000622633 APOA5Q6Q788 366 aa14.13□□□□□ -0.15
LITAF-221ENST00000622633 VGLL2Q8N8G2 317 aa14.13□□□□□ -0.15
LITAF-221ENST00000622633 UBE2Q2LH0YL09 131 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 PDE8BO95263 885 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 LMOD1P29536 600 aaPredicted RBP14.12□□□□□ -0.15
LITAF-221ENST00000622633 SYKP43405 635 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 HSPA2P54652 639 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 GNL2Q13823 731 aaKnown RBP14.12□□□□□ -0.15
LITAF-221ENST00000622633 TTF1Q15361 905 aaPredicted RBP14.12□□□□□ -0.15
LITAF-221ENST00000622633 UBE3CQ15386 1083 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 ARMCX5Q6P1M9 558 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 NFXL1Q6ZNB6 911 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 KCND1Q9NSA2 647 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 CPSF2Q9P2I0 782 aaKnown RBP14.12□□□□□ -0.15
LITAF-221ENST00000622633 IMPACTQ9P2X3 320 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 TRMT112Q9UI30 125 aaKnown RBP14.12□□□□□ -0.15
LITAF-221ENST00000622633 CDHR2Q9BYE9 1310 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 AP1G2O75843 785 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 LIG3P49916 1009 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 RWDD2BP57060 319 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 CRYMQ14894 314 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 SHC4Q6S5L8 630 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 IGDCC4Q8TDY8 1250 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 ZNF512BQ96KM6 892 aaPredicted RBP14.12□□□□□ -0.15
LITAF-221ENST00000622633 CLIC6Q96NY7 704 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 PLEKHA4Q9H4M7 779 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 VPS18Q9P253 973 aa14.12□□□□□ -0.15
LITAF-221ENST00000622633 PAPPAQ13219 1627 aa14.11□□□□□ -0.15
LITAF-221ENST00000622633 ZBTB43O43298 467 aa14.11□□□□□ -0.15
LITAF-221ENST00000622633 CDKL5O76039 1030 aa14.11□□□□□ -0.15
LITAF-221ENST00000622633 TRAF1Q13077 416 aa14.11□□□□□ -0.15
LITAF-221ENST00000622633 TBC1D25Q3MII6 688 aa14.11□□□□□ -0.15
LITAF-221ENST00000622633 STRBPQ96SI9 672 aaKnown RBP14.11□□□□□ -0.15
LITAF-221ENST00000622633 TBC1D2BQ9UPU7 963 aa14.11□□□□□ -0.15
LITAF-221ENST00000622633 PPFIA4O75335 1185 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 ATP1A3P13637 1013 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 PSMD2Q13200 908 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 PTPAQ15257 358 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 TMEM67Q5HYA8 995 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 E4F1Q66K89 784 aaPredicted RBP14.1□□□□□ -0.15
LITAF-221ENST00000622633 AIDAQ96BJ3 306 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 SYTL4Q96C24 671 aaPredicted RBP14.1□□□□□ -0.15
LITAF-221ENST00000622633 FAM217BQ9NTX9 383 aaPredicted RBP14.1□□□□□ -0.15
LITAF-221ENST00000622633 TCRBV5S4A2TA0A5A2 114 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 GOLGA8AA7E2F4 631 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 SNAP23O00161 211 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 RANBP6O60518 1105 aaKnown RBP14.1□□□□□ -0.15
LITAF-221ENST00000622633 TADA3O75528 432 aa14.1□□□□□ -0.15
LITAF-221ENST00000622633 IARSP41252 1262 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms