RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 APOA5Q6Q788 366 aa21.83■■□□□ 1.09
SEMA6C-210ENST00000621728 TMOD2Q9NZR1 351 aa21.83■■□□□ 1.09
SEMA6C-210ENST00000621728 JAK2O60674 1132 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 DDNO94850 711 aaPredicted RBP21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 LIFRP42702 1097 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 SART3Q15020 963 aaKnown RBP21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 CDAN1Q8IWY9 1227 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 CCDC144CPQ8IYA2 1237 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 ZNF444Q8N0Y2 327 aaPredicted RBP21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 DNAJC18Q9H819 358 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 IL17RBQ9NRM6 502 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 CHMP5Q9NZZ3 219 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 SERPINB13Q9UIV8 391 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 ERICH2A1L162 156 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 ENTPD3O75355 529 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 NPM3O75607 178 aaKnown RBP21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 HLA-DOAP06340 250 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 SGMS1Q86VZ5 419 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 MICU3Q86XE3 530 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 GPC2Q8N158 579 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 SMC3Q9UQE7 1217 aa21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.82■■□□□ 1.08
SEMA6C-210ENST00000621728 CCDC69A6NI79 296 aa21.81■■□□□ 1.08
SEMA6C-210ENST00000621728 CTDNEP1O95476 244 aa21.81■■□□□ 1.08
SEMA6C-210ENST00000621728 GJB2P29033 226 aa21.81■■□□□ 1.08
SEMA6C-210ENST00000621728 SHMT1P34896 483 aa21.81■■□□□ 1.08
SEMA6C-210ENST00000621728 IQCA1Q86XH1 822 aa21.81■■□□□ 1.08
SEMA6C-210ENST00000621728 TSPY3P0CV98 308 aa21.8■■□□□ 1.08
SEMA6C-210ENST00000621728 TSPY8P0CW00 308 aa21.8■■□□□ 1.08
SEMA6C-210ENST00000621728 CWC22Q9HCG8 908 aaKnown RBP21.8■■□□□ 1.08
SEMA6C-210ENST00000621728 EPS15P42566 896 aa21.8■■□□□ 1.08
SEMA6C-210ENST00000621728 KIF4BQ2VIQ3 1234 aa21.8■■□□□ 1.08
SEMA6C-210ENST00000621728 RCSD1Q6JBY9 416 aa21.8■■□□□ 1.08
SEMA6C-210ENST00000621728 TRPM4Q8TD43 1214 aa21.8■■□□□ 1.08
SEMA6C-210ENST00000621728 TMEM39BQ9GZU3 492 aa21.8■■□□□ 1.08
SEMA6C-210ENST00000621728 DHX36Q9H2U1 1008 aaKnown RBP21.8■■□□□ 1.08
SEMA6C-210ENST00000621728 GPRC5DQ9NZD1 345 aa21.8■■□□□ 1.08
SEMA6C-210ENST00000621728 ATRNL1Q5VV63 1379 aa21.8■■□□□ 1.08
SEMA6C-210ENST00000621728 MYO1BO43795 1136 aa21.79■■□□□ 1.08
SEMA6C-210ENST00000621728 AKR1B1P15121 316 aa21.79■■□□□ 1.08
SEMA6C-210ENST00000621728 GSE1Q14687 1217 aa21.79■■□□□ 1.08
SEMA6C-210ENST00000621728 SHROOM1Q2M3G4 852 aaPredicted RBP21.79■■□□□ 1.08
SEMA6C-210ENST00000621728 IFIT1BQ5T764 474 aaKnown RBP21.79■■□□□ 1.08
SEMA6C-210ENST00000621728 CRACR2BQ8N4Y2 399 aaPredicted RBP21.79■■□□□ 1.08
SEMA6C-210ENST00000621728 MTA3Q9BTC8 594 aa21.79■■□□□ 1.08
SEMA6C-210ENST00000621728 SLC12A7Q9Y666 1083 aa21.79■■□□□ 1.08
SEMA6C-210ENST00000621728 ZBTB43O43298 467 aa21.78■■□□□ 1.08
SEMA6C-210ENST00000621728 NSUN7Q8NE18 718 aaKnown RBP21.78■■□□□ 1.08
SEMA6C-210ENST00000621728 FAM151AQ8WW52 585 aa21.78■■□□□ 1.08
SEMA6C-210ENST00000621728 DDX11Q96FC9 970 aa21.78■■□□□ 1.08
SEMA6C-210ENST00000621728 CSRNP1Q96S65 589 aa21.78■■□□□ 1.08
SEMA6C-210ENST00000621728 EHD4Q9H223 541 aa21.78■■□□□ 1.08
SEMA6C-210ENST00000621728 ZNF287Q9HBT7 754 aa21.78■■□□□ 1.08
SEMA6C-210ENST00000621728 PI4KBQ9UBF8 816 aa21.78■■□□□ 1.08
SEMA6C-210ENST00000621728 CDC27P30260 824 aa21.78■■□□□ 1.08
SEMA6C-210ENST00000621728 ADD1P35611 737 aaKnown RBP21.78■■□□□ 1.08
SEMA6C-210ENST00000621728 METAP2P50579 478 aaKnown RBP eCLIP21.78■■□□□ 1.08
SEMA6C-210ENST00000621728 ZNF654Q8IZM8 581 aa21.78■■□□□ 1.08
SEMA6C-210ENST00000621728 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.78■■□□□ 1.08
SEMA6C-210ENST00000621728 CIZ1Q9ULV3 898 aaPredicted RBP21.78■■□□□ 1.08
SEMA6C-210ENST00000621728 COL2A1P02458 1487 aaPredicted RBP21.77■■□□□ 1.08
SEMA6C-210ENST00000621728 GOLGA8AA7E2F4 631 aa21.77■■□□□ 1.08
SEMA6C-210ENST00000621728 H7C1D1 291 aa21.77■■□□□ 1.08
SEMA6C-210ENST00000621728 FOXD4L5Q5VV16 416 aaPredicted RBP21.77■■□□□ 1.08
SEMA6C-210ENST00000621728 CLEC10AQ8IUN9 316 aa21.77■■□□□ 1.08
SEMA6C-210ENST00000621728 FOXD4L4Q8WXT5 416 aaPredicted RBP21.77■■□□□ 1.08
SEMA6C-210ENST00000621728 FAM217BQ9NTX9 383 aaPredicted RBP21.77■■□□□ 1.08
SEMA6C-210ENST00000621728 NEDD1Q8NHV4 660 aa21.76■■□□□ 1.07
SEMA6C-210ENST00000621728 NUP133Q8WUM0 1156 aa21.76■■□□□ 1.07
SEMA6C-210ENST00000621728 SWAP70Q9UH65 585 aa21.76■■□□□ 1.07
SEMA6C-210ENST00000621728 HACL1Q9UJ83 578 aa21.76■■□□□ 1.07
SEMA6C-210ENST00000621728 ZDHHC9Q9Y397 364 aa21.76■■□□□ 1.07
SEMA6C-210ENST00000621728 PTPDC1A2A3K4 754 aa21.76■■□□□ 1.07
SEMA6C-210ENST00000621728 FKBP1CQ5VVH2 108 aa21.76■■□□□ 1.07
SEMA6C-210ENST00000621728 CHMP4CQ96CF2 233 aa21.76■■□□□ 1.07
SEMA6C-210ENST00000621728 MMP14P50281 582 aa21.75■■□□□ 1.07
SEMA6C-210ENST00000621728 TMTC2Q8N394 836 aa21.75■■□□□ 1.07
SEMA6C-210ENST00000621728 HIRAP54198 1017 aaPredicted RBP21.74■■□□□ 1.07
SEMA6C-210ENST00000621728 RASA3Q14644 834 aa21.74■■□□□ 1.07
SEMA6C-210ENST00000621728 SMARCC2Q8TAQ2 1214 aa21.74■■□□□ 1.07
SEMA6C-210ENST00000621728 CEP95Q96GE4 821 aa21.74■■□□□ 1.07
SEMA6C-210ENST00000621728 TCP11L1Q9NUJ3 509 aa21.74■■□□□ 1.07
SEMA6C-210ENST00000621728 PGAP2Q9UHJ9 254 aa21.74■■□□□ 1.07
SEMA6C-210ENST00000621728 GREB1LQ9C091 1923 aaPredicted RBP21.74■■□□□ 1.07
SEMA6C-210ENST00000621728 RRP1BQ14684 758 aaKnown RBP21.74■■□□□ 1.07
SEMA6C-210ENST00000621728 RAB3GAP1Q15042 981 aa21.74■■□□□ 1.07
SEMA6C-210ENST00000621728 SYNE3Q6ZMZ3 975 aa21.74■■□□□ 1.07
SEMA6C-210ENST00000621728 FAM83AQ86UY5 434 aa21.74■■□□□ 1.07
SEMA6C-210ENST00000621728 TRIM34Q9BYJ4 488 aa21.74■■□□□ 1.07
SEMA6C-210ENST00000621728 STX8Q9UNK0 236 aa21.74■■□□□ 1.07
SEMA6C-210ENST00000621728 MPHOSPH10O00566 681 aaKnown RBP21.73■■□□□ 1.07
SEMA6C-210ENST00000621728 METTL16Q86W50 562 aaKnown RBP21.73■■□□□ 1.07
SEMA6C-210ENST00000621728 FOXP4Q8IVH2 680 aaPredicted RBP21.73■■□□□ 1.07
SEMA6C-210ENST00000621728 CMTR1Q8N1G2 835 aaKnown RBP21.73■■□□□ 1.07
SEMA6C-210ENST00000621728 LLPHQ9BRT6 129 aaKnown RBP21.73■■□□□ 1.07
SEMA6C-210ENST00000621728 GDF11O95390 407 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 SYT1P21579 422 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 FOSBP53539 338 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 JAG1P78504 1218 aa21.72■■□□□ 1.07
SEMA6C-210ENST00000621728 ANGEL2Q5VTE6 544 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms