RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 HAUS7Q99871 368 aa20.8■□□□□ 0.92
HMGN3-203ENST00000620514 DCTPP1Q9H773 170 aa20.8■□□□□ 0.92
HMGN3-203ENST00000620514 FCGRTP55899 365 aa20.79■□□□□ 0.92
HMGN3-203ENST00000620514 EVX2Q03828 476 aa20.79■□□□□ 0.92
HMGN3-203ENST00000620514 NBPF11Q86T75 865 aa20.79■□□□□ 0.92
HMGN3-203ENST00000620514 ANKRD13CQ8N6S4 541 aa20.79■□□□□ 0.92
HMGN3-203ENST00000620514 YTHDC1Q96MU7 727 aaKnown RBP20.79■□□□□ 0.92
HMGN3-203ENST00000620514 CRNKL1Q9BZJ0 848 aaKnown RBP20.79■□□□□ 0.92
HMGN3-203ENST00000620514 SERPINB13Q9UIV8 391 aa20.79■□□□□ 0.92
HMGN3-203ENST00000620514 MYPNQ86TC9 1320 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 DDX60LQ5H9U9 1706 aaKnown RBP20.78■□□□□ 0.92
HMGN3-203ENST00000620514 GH2P01242 217 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 EN2P19622 333 aaPredicted RBP20.78■□□□□ 0.92
HMGN3-203ENST00000620514 HOXD10P28358 340 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 ADD2P35612 726 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 RRP1P56182 461 aaKnown RBP20.78■□□□□ 0.92
HMGN3-203ENST00000620514 BACE1P56817 501 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 PRKCZQ05513 592 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 TATDN1Q6P1N9 297 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 TTC6Q86TZ1 520 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 SDR42E1Q8WUS8 393 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 EHD4Q9H223 541 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 ARMT1Q9H993 441 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 GINM1Q9NU53 330 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 PNMA3Q9UL41 463 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 GABRQQ9UN88 632 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 PCDHB15Q9Y5E8 787 aa20.78■□□□□ 0.92
HMGN3-203ENST00000620514 KIAA0100Q14667 2235 aaKnown RBP20.78■□□□□ 0.92
HMGN3-203ENST00000620514 RAET1EQ8TD07 263 aa20.77■□□□□ 0.92
HMGN3-203ENST00000620514 ASCC2Q9H1I8 757 aaPredicted RBP20.77■□□□□ 0.92
HMGN3-203ENST00000620514 MGAMO43451 1857 aa20.77■□□□□ 0.92
HMGN3-203ENST00000620514 NAV1Q8NEY1 1877 aa20.77■□□□□ 0.92
HMGN3-203ENST00000620514 CENPFP49454 3210 aa20.76■□□□□ 0.91
HMGN3-203ENST00000620514 USP17L10C9JJH3 530 aa20.76■□□□□ 0.91
HMGN3-203ENST00000620514 POLR3DP05423 398 aaPredicted RBP20.76■□□□□ 0.91
HMGN3-203ENST00000620514 SHMT1P34896 483 aa20.76■□□□□ 0.91
HMGN3-203ENST00000620514 TMEM106CQ9BVX2 250 aa20.76■□□□□ 0.91
HMGN3-203ENST00000620514 DCP1AQ9NPI6 582 aaPredicted RBP20.76■□□□□ 0.91
HMGN3-203ENST00000620514 MCM9Q9NXL9 1143 aa20.76■□□□□ 0.91
HMGN3-203ENST00000620514 TMOD4Q9NZQ9 345 aa20.76■□□□□ 0.91
HMGN3-203ENST00000620514 RBBP6Q7Z6E9 1792 aaKnown RBP20.76■□□□□ 0.91
HMGN3-203ENST00000620514 PRKAB2O43741 272 aa20.75■□□□□ 0.91
HMGN3-203ENST00000620514 MBD4O95243 580 aa20.75■□□□□ 0.91
HMGN3-203ENST00000620514 CYP2D6P10635 497 aa20.75■□□□□ 0.91
HMGN3-203ENST00000620514 PABPC4Q13310 644 aaKnown RBP eCLIP20.75■□□□□ 0.91
HMGN3-203ENST00000620514 CERKLQ49MI3 558 aaPredicted RBP20.75■□□□□ 0.91
HMGN3-203ENST00000620514 TSHZ3Q63HK5 1081 aa20.75■□□□□ 0.91
HMGN3-203ENST00000620514 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.75■□□□□ 0.919e-10■■□□□ 12.3
HMGN3-203ENST00000620514 ECHDC1Q9NTX5 307 aa20.75■□□□□ 0.91
HMGN3-203ENST00000620514 PDE4DIPQ5VU43 2346 aa20.75■□□□□ 0.91
HMGN3-203ENST00000620514 C19orf81C9J6K1 198 aa20.74■□□□□ 0.91
HMGN3-203ENST00000620514 GABPAQ06546 454 aa20.74■□□□□ 0.91
HMGN3-203ENST00000620514 FAM110CQ1W6H9 321 aa20.74■□□□□ 0.91
HMGN3-203ENST00000620514 TNPO2O14787 897 aaKnown RBP20.73■□□□□ 0.91
HMGN3-203ENST00000620514 GRK4P32298 578 aa20.73■□□□□ 0.91
HMGN3-203ENST00000620514 RAB3GAP1Q15042 981 aa20.73■□□□□ 0.91
HMGN3-203ENST00000620514 MTFR1Q15390 333 aa20.73■□□□□ 0.91
HMGN3-203ENST00000620514 ABCB5Q2M3G0 1257 aa20.73■□□□□ 0.91
HMGN3-203ENST00000620514 P2RX7Q99572 595 aaKnown RBP20.73■□□□□ 0.91
HMGN3-203ENST00000620514 EMILIN3Q9NT22 766 aa20.73■□□□□ 0.91
HMGN3-203ENST00000620514 PEX10O60683 326 aa20.72■□□□□ 0.91
HMGN3-203ENST00000620514 HOXA7P31268 230 aaPredicted RBP20.72■□□□□ 0.91
HMGN3-203ENST00000620514 GUCY1A2P33402 732 aa20.72■□□□□ 0.91
HMGN3-203ENST00000620514 GCLCP48506 637 aaPredicted RBP20.72■□□□□ 0.91
HMGN3-203ENST00000620514 FLT3LGP49771 235 aa20.72■□□□□ 0.91
HMGN3-203ENST00000620514 IRX3P78415 501 aaPredicted RBP20.72■□□□□ 0.91
HMGN3-203ENST00000620514 UBE3CQ15386 1083 aa20.72■□□□□ 0.91
HMGN3-203ENST00000620514 ZYXQ15942 572 aaKnown RBP20.72■□□□□ 0.91
HMGN3-203ENST00000620514 USP17L2Q6R6M4 530 aa20.72■□□□□ 0.91
HMGN3-203ENST00000620514 ACER1Q8TDN7 264 aa20.72■□□□□ 0.91
HMGN3-203ENST00000620514 CRBNQ96SW2 442 aa20.72■□□□□ 0.91
HMGN3-203ENST00000620514 MYH7P12883 1935 aa20.71■□□□□ 0.91
HMGN3-203ENST00000620514 SLC44A5Q8NCS7 719 aa20.71■□□□□ 0.91
HMGN3-203ENST00000620514 DYNLL2Q96FJ2 89 aa20.71■□□□□ 0.91
HMGN3-203ENST00000620514 PUS7LQ9H0K6 701 aaKnown RBP20.71■□□□□ 0.91
HMGN3-203ENST00000620514 SMIM22K7EJ46 135 aa20.7■□□□□ 0.9
HMGN3-203ENST00000620514 FEZ1Q99689 392 aa20.7■□□□□ 0.9
HMGN3-203ENST00000620514 CABP5Q9NP86 173 aa20.7■□□□□ 0.9
HMGN3-203ENST00000620514 BIN2Q9UBW5 565 aaPredicted RBP20.7■□□□□ 0.9
HMGN3-203ENST00000620514 CYP2D7A0A087X1C5 515 aa20.69■□□□□ 0.9
HMGN3-203ENST00000620514 ADCY3O60266 1144 aa20.69■□□□□ 0.9
HMGN3-203ENST00000620514 ELNP15502 786 aa20.69■□□□□ 0.9
HMGN3-203ENST00000620514 HERVK_113P62684 666 aa20.69■□□□□ 0.9
HMGN3-203ENST00000620514 SEPT2Q15019 361 aa20.69■□□□□ 0.9
HMGN3-203ENST00000620514 ZSCAN25Q6NSZ9 544 aa20.69■□□□□ 0.9
HMGN3-203ENST00000620514 SLAIN1Q8ND83 568 aa20.69■□□□□ 0.9
HMGN3-203ENST00000620514 COA7Q96BR5 231 aa20.69■□□□□ 0.9
HMGN3-203ENST00000620514 GPATCH3Q96I76 525 aa20.69■□□□□ 0.9
HMGN3-203ENST00000620514 TXNRD2Q9NNW7 524 aa20.69■□□□□ 0.9
HMGN3-203ENST00000620514 ATP8A2Q9NTI2 1148 aa20.69■□□□□ 0.9
HMGN3-203ENST00000620514 MORF4L1Q9UBU8 362 aa20.69■□□□□ 0.9
HMGN3-203ENST00000620514 BAZ2AQ9UIF9 1905 aaKnown RBP20.68■□□□□ 0.9
HMGN3-203ENST00000620514 DOCK3Q8IZD9 2030 aa20.68■□□□□ 0.9
HMGN3-203ENST00000620514 POTEEQ6S8J3 1075 aa20.68■□□□□ 0.9
HMGN3-203ENST00000620514 KBTBD3Q8NAB2 608 aa20.68■□□□□ 0.9
HMGN3-203ENST00000620514 OTUD7AQ8TE49 926 aaPredicted RBP20.68■□□□□ 0.9
HMGN3-203ENST00000620514 C12orf42Q96LP6 360 aa20.68■□□□□ 0.9
HMGN3-203ENST00000620514 TAOK2Q9UL54 1235 aa20.68■□□□□ 0.9
HMGN3-203ENST00000620514 SLC4A4Q9Y6R1 1079 aa20.68■□□□□ 0.9
HMGN3-203ENST00000620514 BRCA2P51587 3418 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms